mRNA_C-tenellus_contig7883.1.2 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig7883.1.2
Unique NamemRNA_C-tenellus_contig7883.1.2
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: D8LF30_ECTSI (C3HC-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF30_ECTSI)

HSP 1 Score: 269 bits (687), Expect = 8.070e-79
Identity = 199/488 (40.78%), Postives = 251/488 (51.43%), Query Frame = 2 
Query:  368 MREDLGEQVDRALSHFDEAVRTGTLGGEKDPLGA---QEKPTRREYLEELANRIVSRLDEHDH--DRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSE------------------CTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDKEVANAGVGDASSRGCRGVGSKDSSVQEKGGGKGAVSL----LHNLGDDILGKAAAIAVFGWRAVDS-IPQMA--------GSPSPG-------GGK-------PRLCCALCDRRLATENFLCLSPAGPTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQ-----NRKRRRLSGD--LVKPMDPVAEHRSFCPWAEVQVLLEENKRRKGGEG-EGEVWPGWRYSLQSVTRWQGPN 1657
            M +DL E+V  AL+ FD AVR      + +P+     QE P   + LE    RI +  D      D+P CRPWDY  F  RL TFT L WF+KP   SP VCARYGW NT RD LSC+ C+ +L F     GS   + ++                   +SF++RL S H D+CPW GN C  +FL+LP MA ED     LAR DSLLP+ +A ALPEV+LP++F ++CPGGL  LAAK      E R++   N   G A  R            Q  G GK A S     +   GD++LG AAAIA+FGW++  + +P  A        GS S G       GG         RL CALC RRL T+NFL L  AGP+ SG G T A          G      ++S+ + +     + KRRRLSG    +KPMD   EHRSFCPWA V   +       G E  EG V PGWR  L++V  WQ P+
Sbjct:    1 MPKDLEEKVVAALARFDTAVR------QANPIRLNQQQEDPREIDVLE----RIAAEADGARPLADKPTCRPWDYESFKARLATFTPLNWFSKPAFASPAVCARYGWINTGRDTLSCQCCSAQLRFADQAAGSDGNAANDDVCGXXXXXIVAVVEPTPSSSFSSRLQSQHHDLCPWNGNACPREFLQLPPMAVEDQLADFLARLDSLLPVMRAAALPEVSLPSTFEQHCPGGLSALAAKAMPSVVETREETSENRTAG-AHKR------------QRSGSGKAAGSADNREMLRFGDEMLGTAAAIAMFGWQSAPATVPVSACAAVSPTEGSSSNGSTVAVADGGARATAKSPARLSCALCKRRLVTDNFLTLE-AGPS-SGVGCTAAGT--------GAEESPGVLSSPEGRGGSGRSGKRRRLSGGGTPLKPMDLAVEHRSFCPWAAVHPPV------AGEEAIEGAV-PGWRLPLEAVLGWQNPS 448
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BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A5D6Y899_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y899_9STRA)

HSP 1 Score: 113 bits (283), Expect = 3.390e-23
Identity = 121/438 (27.63%), Postives = 173/438 (39.50%), Query Frame = 2 
Query:  386 EQVDRALSHFDEAVRTGTLGGEKDPLGAQEKPTRREYLEELANRIVSRLDEHDHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTAR-DELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDKEVANAGVGDASSRGCRGVGSKDSSVQEKGG------GKGAVSLLHNLGDDILGKAAAIAVFGWR--AVDSIPQMAGSPSPGGGKPRLCCALCDRRLATENFLCLSPAGPTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQNRKRRRLSGDLVKPMDPVAEHRSFCPW-------AEVQVLLEENKRRKGGEGEGEVW-----PGWRYSLQSV 1636
            EQ+D AL+ + +A           PL A+       +L   A    S   + +   P CRPW + DF  R  +F    WFAKP ++S L  AR+GWR++ R DEL C+ C   L F    + S   +     ++AA L+SGH  +CPW  NP    F  LP  + E +R  L+ R +  L    A    + AL           LE L A     +   R     +A  G +SSR  R      + V   GG      G GA  L       +L   A ++  GW   AVD+            G  R  C +C+RR    ++               T     S    D GG         +  Q        G     +DPVA+HR FCPW       A  ++ +  +   K GE + ++W     PGW+   Q++
Sbjct:    2 EQLDAALAAWRDAT---------SPLDAKASADHSVFLP--AASAASEPPDAEKSAPSCRPWSHADFADRAASFAIATWFAKPASISALESARHGWRHSGRSDELRCDCCKQVLCFEIDAQLSEEGAQRMADAYAAMLASGHSALCPWRDNPSPAAFTTLPIASLEQVREALVKRVERAL----AACASDSAL-----------LEALGALRIDAQALARVVGREDADAGSSSSR--RRTSLAAALVCNFGGLVVPPDGSGAADLSR-----LLLHVAVVSACGWELDAVDA--------DGDAGVAR--CEICNRRWRVASYA--------------TAPRSESSADSDAGGER------AAKRQKAASADFGGAATALVDPVAQHRWFCPWVTARRQEASHELGVASDDVAKYGENDAQLWEFMLLPGWQQYAQAL 376
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: S8E2T9_9LAMI (C3HC-type domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8E2T9_9LAMI)

HSP 1 Score: 107 bits (266), Expect = 1.460e-22
Identity = 53/140 (37.86%), Postives = 74/140 (52.86%), Query Frame = 2 
Query:  554 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASF 973
            P C+PWD +DF  RL TF ++ WFAKPQ +SP+ CAR GW N+  D + C +C  RL F      +          F+ +L +GH  +CPW  N C+ED    P ++   L      R  SL   +Q  ALP ++L  +F
Sbjct:   76 PTCKPWDRDDFFSRLSTFKSISWFAKPQVLSPVECARRGWINSDIDTVVCSYCGARLLFATPLSWTQQQVEKAAVVFSLKLEAGHKMLCPWINNACAEDIAHFPDVSSRVLAEDYKRRITSL---SQIIALPAISLSTNF 212
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A6I9SSD9_SESIN (uncharacterized protein LOC105158011 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9SSD9_SESIN)

HSP 1 Score: 111 bits (278), Expect = 7.280e-22
Identity = 61/150 (40.67%), Postives = 77/150 (51.33%), Query Frame = 2 
Query:  554 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLER 1003
            P CRPWD +D   RL TF ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +  +          F+ +L SGH  +CPW  N C+ED  K P ++  DL      R   L  L+Q  ALP V LP +        LE+
Sbjct:   73 PACRPWDRDDLFRRLSTFKSMTWFAKPQVVSPLECARRGWLNVDMDTIACVSCDTRLLFSTPSAWTQQQVEKAAMVFSLKLDSGHKSLCPWINNACTEDIAKFPIVSRADLIEDYKKR---LFSLSQLIALP-VILPVAIDNIMSSQLEQ 218
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A2G9GKM9_9LAMI (C3HC-type domain-containing protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GKM9_9LAMI)

HSP 1 Score: 108 bits (269), Expect = 8.960e-21
Identity = 62/170 (36.47%), Postives = 82/170 (48.24%), Query Frame = 2 
Query:  554 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVA--------LPASFAEYCPGG----LERLAAKVRGI 1027
            PRCRPWD ND   RL +F ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +             F+ +L SGH  +CPW  N C+E+  + P ++   L      RF SL  L     + +VA        L   F EY   G    LE+   ++ G+
Sbjct:   75 PRCRPWDRNDLFQRLSSFKSMTWFAKPQVVSPLECARRGWVNVDMDTIACPSCDARLLFSTPSTWGQRQVEKAAMVFSLKLESGHKLLCPWINNACTEELAQFPIVSRAVLVEDYKKRFFSLSQLIALPVISQVATNNLGSSQLEQFFREYSTSGSNVALEKSGTELLGV 244
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A8K1CEY1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEY1_PYTOL)

HSP 1 Score: 104 bits (259), Expect = 2.960e-20
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 2 
Query:  542 DHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLL 922
            D    +CR W + DF  RL T+    WFAKP+A+SPLVCAR+GW NTA D L C  C   L     +K S     +    FA +L++ H D+CPW  NP  E F  LP ++   +   +  R + LL
Sbjct:   58 DFTSKQCRAWSHADFLQRLATYGIATWFAKPKAISPLVCARFGWVNTASDMLQCAHCEEYLCCAIDDKLSKDGVKAVAERFAGQLATSHADMCPWKSNPSPESFTVLPILSPHQVSDDITTRMEKLL 184
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BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: UPI00053F4B22 (uncharacterized protein LOC100243076 isoform X1 n=8 Tax=Vitis TaxID=3603 RepID=UPI00053F4B22)

HSP 1 Score: 106 bits (264), Expect = 5.030e-20
Identity = 55/144 (38.19%), Postives = 72/144 (50.00%), Query Frame = 2 
Query:  524 SRLDEHDHDRPRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEV 955
            SR D      P CRPWD  D   RL TF ++ WFAKP+ VS + CAR GW N   D ++CE C  RL F   +  +          F+ +L +GH  +CPW  N C E+  + P    +DL  G   R  +LL L    ALP +
Sbjct:   54 SRGDIQHSSTPLCRPWDRGDLMQRLATFKSMTWFAKPEVVSAINCARRGWVNVDMDIIACEACGARLLFSAPSSWTRQQVEKAALVFSLKLDNGHRLLCPWINNACDEELAQFPPATVQDLMDGYRERASALLKLT---ALPSI 194
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BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: UPI001CB8D6F9 (uncharacterized protein LOC122586697 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8D6F9)

HSP 1 Score: 104 bits (259), Expect = 1.410e-19
Identity = 50/136 (36.76%), Postives = 70/136 (51.47%), Query Frame = 2 
Query:  554 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVAL 961
            P CRPWD  D   R+ TF ++ WFAKP+ VS + CAR GW N   D ++CE C  RL F   +  +        + F+ +L+SGH  +CPW  N C E   + P  +  DL      R+ SLL L +   +   A+
Sbjct:   72 PVCRPWDRKDLLARIATFKSMTWFAKPEVVSAINCARRGWVNVDTDTIACESCRARLFFSTPSSWAQEQVEKAASVFSLKLNSGHKLLCPWVDNACDEKLAQFPPTSPADLVGNYKKRYASLLQLLELPVISSTAI 207
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: W2K3R7_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora parasitica TaxID=4792 RepID=W2K3R7_PHYPR)

HSP 1 Score: 102 bits (253), Expect = 1.540e-19
Identity = 47/121 (38.84%), Postives = 67/121 (55.37%), Query Frame = 2 
Query:  560 CRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLL 922
            CRPW++ DF  R+ +F+ + WFAKP  +S L C+RYGW N+A D+L C  C   L F    K S + +      FA +L +GH  +CPW GNP  E F+ LP      +    + R + L+
Sbjct:   56 CRPWEHKDFLSRVSSFSIVSWFAKPDVISALECSRYGWINSAPDQLYCNCCKQFLCFKIDGKLSDTGALKVAKIFAGQLVTGHTQLCPWRGNPSPEAFMTLPIATKRQVYETFMDRLEGLV 176
[Close]
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Match: A0A4D9C5L1_SALSN (C3HC-type domain-containing protein n=4 Tax=Salvia TaxID=21880 RepID=A0A4D9C5L1_SALSN)

HSP 1 Score: 104 bits (259), Expect = 1.750e-19
Identity = 56/150 (37.33%), Postives = 76/150 (50.67%), Query Frame = 2 
Query:  554 PRCRPWDYNDFTLRLRTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKGSTSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGLLARFDSLLPLAQAGALPEVALPASFAEYCPGGLER 1003
            P CRPWD  D   RL TF ++ WFAKPQ VSPL CAR GW N   D ++C  C  RL F   +             F+ +L  GH+ +CPW  N C+E+  + P ++   L      R   +L L+Q  ALP V +P +  +     LE+
Sbjct:  102 PVCRPWDRGDLVRRLSTFKSMTWFAKPQVVSPLECARRGWVNVDMDTIACVSCNTRLLFSTPSAWGKQQVEKAAMVFSLKLEGGHNLLCPWTNNSCAEELAQFPVLSRASLIEDYKGR---ILSLSQLIALP-VIVPVAIDDLRASQLEK 247
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7883.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LF30_ECTSI8.070e-7940.78C3HC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A5D6Y899_9STRA3.390e-2327.63Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
S8E2T9_9LAMI1.460e-2237.86C3HC-type domain-containing protein (Fragment) n=1... [more]
A0A6I9SSD9_SESIN7.280e-2240.67uncharacterized protein LOC105158011 n=1 Tax=Sesam... [more]
A0A2G9GKM9_9LAMI8.960e-2136.47C3HC-type domain-containing protein n=1 Tax=Handro... [more]
A0A8K1CEY1_PYTOL2.960e-2040.16Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
UPI00053F4B225.030e-2038.19uncharacterized protein LOC100243076 isoform X1 n=... [more]
UPI001CB8D6F91.410e-1936.76uncharacterized protein LOC122586697 n=1 Tax=Erige... [more]
W2K3R7_PHYPR1.540e-1938.84Uncharacterized protein n=7 Tax=Phytophthora paras... [more]
A0A4D9C5L1_SALSN1.750e-1937.33C3HC-type domain-containing protein n=4 Tax=Salvia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7883contigC-tenellus_contig7883:833..5154 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LF30
Preferred nameZC3HC1
PFAMsRsm1,zf-C3HC
Model size2058
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00336
KEGG koko:K00565
KEGG ReactionR03805
KEGG Pathwayko03015,map03015
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0006403,GO:0006405,GO:0006406,GO:0006611,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008150,GO:0008152,GO:0009966,GO:0009968,GO:0010467,GO:0010646,GO:0010648,GO:0010941,GO:0012505,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0019899,GO:0019900,GO:0019901,GO:0023051,GO:0023057,GO:0031090,GO:0031503,GO:0031965,GO:0031967,GO:0031975,GO:0033036,GO:0034613,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051168,GO:0051169,GO:0051179,GO:0051234,GO:0051236,GO:0051641,GO:0051649,GO:0060548,GO:0065007,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:1901099,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001239,GO:2001240
Exons7
Evalue9.82e-82
EggNOG OGsKOG4765@1|root,KOG4765@2759|Eukaryota
Ec32 ortholog descriptionBaculoviral inhibition of apoptosis protein repeat
Ec32 orthologEc-21_006510.1
EC2.1.1.56
Descriptionzinc ion binding
Cds size1482
COG categoryS
BRITEko00000,ko00001,ko01000,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7883.1.2prot_C-tenellus_contig7883.1.2Choristocarpus tenellus KU2346polypeptideC-tenellus_contig7883 1111..4738 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790066.5139666-UTR-C-tenellus_contig7883:832..11101680790066.5139666-UTR-C-tenellus_contig7883:832..1110Choristocarpus tenellus KU2346UTRC-tenellus_contig7883 833..1110 -
1680790066.5993855-UTR-C-tenellus_contig7883:4738..49651680790066.5993855-UTR-C-tenellus_contig7883:4738..4965Choristocarpus tenellus KU2346UTRC-tenellus_contig7883 4739..4965 -
1680790066.6139035-UTR-C-tenellus_contig7883:5083..51541680790066.6139035-UTR-C-tenellus_contig7883:5083..5154Choristocarpus tenellus KU2346UTRC-tenellus_contig7883 5084..5154 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790066.5321202-CDS-C-tenellus_contig7883:1110..13281680790066.5321202-CDS-C-tenellus_contig7883:1110..1328Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 1111..1328 -
1680790066.5460923-CDS-C-tenellus_contig7883:1977..26461680790066.5460923-CDS-C-tenellus_contig7883:1977..2646Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 1978..2646 -
1680790066.5559378-CDS-C-tenellus_contig7883:2840..30251680790066.5559378-CDS-C-tenellus_contig7883:2840..3025Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 2841..3025 -
1680790066.568448-CDS-C-tenellus_contig7883:3306..34661680790066.568448-CDS-C-tenellus_contig7883:3306..3466Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 3307..3466 -
1680790066.5776458-CDS-C-tenellus_contig7883:3645..38311680790066.5776458-CDS-C-tenellus_contig7883:3645..3831Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 3646..3831 -
1680790066.587248-CDS-C-tenellus_contig7883:4674..47381680790066.587248-CDS-C-tenellus_contig7883:4674..4738Choristocarpus tenellus KU2346CDSC-tenellus_contig7883 4675..4738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig7883.1.2

>prot_C-tenellus_contig7883.1.2 ID=prot_C-tenellus_contig7883.1.2|Name=mRNA_C-tenellus_contig7883.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=494bp
MQQGKKTQRNVPGKTKLCTQYALMREDLGEQVDRALSHFDEAVRTGTLGG
EKDPLGAQEKPTRREYLEELANRIVSRLDEHDHDRPRCRPWDYNDFTLRL
RTFTALWWFAKPQAVSPLVCARYGWRNTARDELSCEFCAVRLTFPGSNKG
STSFSGSECTSFAARLSSGHDDICPWAGNPCSEDFLKLPTMADEDLRRGL
LARFDSLLPLAQAGALPEVALPASFAEYCPGGLERLAAKVRGIKGEVRDK
EVANAGVGDASSRGCRGVGSKDSSVQEKGGGKGAVSLLHNLGDDILGKAA
AIAVFGWRAVDSIPQMAGSPSPGGGKPRLCCALCDRRLATENFLCLSPAG
PTRSGPGNTGADVSSCGTGDKGGSNHNAIISTSDIQNRKRRRLSGDLVKP
MDPVAEHRSFCPWAEVQVLLEENKRRKGGEGEGEVWPGWRYSLQSVTRWQ
GPNGGGVEDSSDKSGDGRESLSLSIKVCVCKGVRQSLNVPAIV*
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mRNA from alignment at C-tenellus_contig7883:833..5154-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig7883.1.2 ID=mRNA_C-tenellus_contig7883.1.2|Name=mRNA_C-tenellus_contig7883.1.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4322bp|location=Sequence derived from alignment at C-tenellus_contig7883:833..5154- (Choristocarpus tenellus KU2346)
CATTGCAGAGGAGGCGGTAGTTGAGGCAGTCCAATTGGGCAAACAGCCCA
TAGCTTTGTGCCAGGAGTTCCTTGGGAGATCCAAGAACGCAGGAGCGCAG
ATAGGATAGAGAAAGGGTATAAAATGTAAGGACAGTGATGCGAAAAATAG
AGAAAAATTACCTGGAGACAATTCCGAAACTTCCTCACCGGTATTAAACG
CGGAAAAGAATAGGCATGACGCAGTAGAACACACTGTCACGTGTCACTGC
TCAGTGGAAGAACTTTGGTTAGATGCACTTTTTTTCGTGCTCACGTCTCA
GGGCCTGTCAGGGCTTTGCTTGTCTCATAAGAAAACGACAAGGTCTTCAT
CAGACTCTGCTCGAGATAAGGCACTAATCAAAGGACCACTTGTTATGGCA
AATGCGATAATGCACAATGCAACAAGGAAAAAAAACTCAGAGAAACGTGC
CGGGGAAGACCAAATTATGTACACAATACGGTAAGGAACGCTCGTTGGCA
GACATTGCCCCATGTTCGCTAGGAAAGAAAATCAACTTCTATTTACCCAC
CCCATACCTGATCCCTGGTGGGGTACACCCGCTCCACGATTTTTCTTCTT
CCCTCGTCGTCCTTGCTCACCACATCTGTCCCCACGATCAACTCAAAAAG
AACCCGATCATAGCCCTCTGCATCCCTTACAATGTCACGATAGTACGCTG
AGTCCCCAACATGGACCATAGAGATCAAGTCAACCTTCACATCTTCCTGG
ATTTCACCTTCTTTCATTCCAAAAGTAGAGAATAACGACCCCGGAACCAT
GTCATCATCCGCCCTAGATGGGACCCTCCCCCCAGGAACTTGGGAAGGGG
AAGGGCAAACCAAGGTGTACGACGCGGTCTGCAGCTCCACCGATGTACCC
GTTTTCATCAGTCGAAAAGGTCCTTTACTCGTTTTGCTGGATAAGGCTTG
TCGAAGCTCCCCACCGGAACCTTGGACCGCTTTGATGACAAGTCTATGTC
GAAACATTTTGGACTTGATGGGGTAGGGAGTTGGGTGAGGCTGGGAGTTG
AACCCCATTGCTGGCAATGGCAATGCTGTCAAAGCCAGCACTGCAAAGCA
TGGCCCTGTGCCAGCCATGTCACTGTCTGTGGAAGACAGCAGACCTGGAT
ATGGAAATTACGTGCCTTAATGTACCTCCTCTTTCCTCGTGTAGATGGGT
ATCCATCATGTGACACATTCTCAACTGTCAACAAAATACAAAATACCGTT
TCAATCCCTATTTTTCATTACACATAACCCATAACCCACATCCCACATCC
CACATCCCACAAACCACAACAAGCACTTATGAGGGAGGATCTAGGTGAAC
AGGTCGATCGGGCTTTATCCCACTTCGACGAAGCTGTGCGTACGGGCACA
CTCGGGGGTGAGAAGGATCCACTCGGTGCTCAAGAGAAACCAACGAGGAG
GGAGTACCTGGAGGAGTTAGCAAACCGAATCGTGTCCAGGCTTGACGAGC
ATGATCACGGTGGGTGATAAATTGCGACTATGGGGTGCTAATGTGCTAAG
GTATTACTAACAAGATAATTCGCTTTGTTTTACGGTTCTCTTTTCCATCC
ACCATCACCCTGATGCCCATTGCACATAGTTGTCCCTTAAGTCACAGAGT
TCGTTTTGCTACCGTGCCCGTCCTCGTTCGCTTTCCAGACAGGCCTCGCT
GCCGCCCGTGGGACTATAATGATTTCACCCTTCGACTGAGAACTTTCACG
GCTCTCTGGTGGTTCGCCAAACCACAAGCTGTCTCTCCCCTTGTGTGTGC
AAGATACGGATGGAGGAACACCGCTAGGGACGAACTGTCTTGTGAATTGT
AAGGCCCTGGGGGTGATGGCTTCGACTGCTGCAGCATTCAGGCCGTGGGC
ATCATTCTTAGCTCTGTTCAAAGATAAAAATTGACCGCAGTACAAGGCCG
TAGCTACAGGGCACTCTAGATTTCGTGTACTTCACTATGCACCTTGGTTC
CGATACCTTAACGCCAAGAAACGTTCTCCACAAACTTTAACTACAATATC
TCTCAATCGCTTTCTATCTGTGCAACGCCTCCCCCTCCTCCCCCAACCCT
GAATGCCCGTCACTGCCATTGCATCGTAGCTGCGCAGTAAGGCTTACTTT
CCCAGGTTCTAATAAGGGTTCGACATCATTTTCTGGCTCTGAATGCACAT
CGTTCGCCGCACGTCTGTCCTCGGGTCATGATGATATCTGTCCTTGGGCC
GGCAACCCGTGCTCGGAAGATTTTCTGAAACTACCAACCATGGCAGACGA
AGATCTACGGCGCGGTGAGCTCCAGTCCTCATTTAGCATGTATCTTTTTT
GTATGTATATGTATGGCCCAAGGAAAAAGGAGTAACCAGGGTCACACCTG
TCAGCTCTTCTTCTCCCATTTTCATTACTAACAGGAAAAATAAGCACATT
GCTATGTTGTTGATCTTATTTGCTGCGCACCTTGCACCCTGGGTACATTC
CAATCCAGGTCTTCTTGCCCGCTTCGACAGCCTCCTCCCTCTGGCCCAGG
CTGGAGCCTTGCCTGAAGTTGCACTACCAGCAAGCTTTGCCGAGTACTGT
CCTGGGGGATTAGAAAGGCTAGCTGCTAAGGTAAGAGGCATTAAGGGAGA
GGTGAGGGACAAGGAGGTTGCCAATGCAGGCGTTGGTGATGCCTCATCAA
GGGGATGCCGTGGAGTTGGGAGCAAGGATAGCAGCGTTCAGGAGAAGGGT
GGGGGAAAGGGGGCAGTTAGTCTTCTGCATAATTTGGGGGATGACATCTT
GGGTAAAGCAGCAGCAATAGCAGTGTTTGGCTGGCGTGCAGTTGATTCAA
TCCCTCAGATGGCTGGCAGCCCCTCCCCTGGAGGAGGCAAACCCCGCCTC
TGTTGTGCCCTCTGTGACCGCCGCTTAGCCACTGAGAATTTCCTTTGCCT
TAGCCCTGCTGGGCCTACTAGGTCGGGTCCAGGGAACACAGGGGCTGATG
TCTCCAGTTGTGGCACCGGAGACAAGGGAGGAAGCAATCATAACGCCATT
ATCTCTACAAGTGACATCCAAAACCGAAAGAGGAGACGCCTGTCTGGTGA
TCTGGTAAAGCCCATGGACCCTGTGGCGGAACACCGCTCCTTCTGCCCCT
GGGCTGAGGTGCAGGTGCTGTTGGAAGGTATATCTGGAGTGTGGACAGAT
TTCGCTTCTTTATTCATGGTGTGTGTGTGTGTGTGTAGTATGGTGGTCCA
CCCGTGTCTTGGATGATGGGTATGGACACTTTTCCTGCGGGCCTGTCTTT
TTGAAATGTATCTTCAGTGGTGTATACCGTAGATGTTGCCTGCATCTCTA
TGTGGGTAGGATGTAGGAGGGGTTGGCGTATGTGAAGAAAAGAAGAATCT
AACATGCGATATGGGCGACACCTTTTTAGGATATCGAAGGAAGTTCTTCT
GGGTGTTTTGGGGGGATTGGCATGCACATGACTGCTCTCGACAACGAACA
TGGCCCAAGTACCCTACACACAGCCTAGCTGTACCCACATGTACAAGGAA
GAAAATCCTGAATTTCATGCATCCATGTTGGAGACAAACATTTGTATGAT
GTAGGTAAGACCTGTCGACGATGCGACTTGAAGGGTGCTGAAGAGCTCGC
TTGCCTTGTTCTCAGTTCATCGGGACCAGGAGGCCTTCTCTCTCTCTCTC
TCTCTCTCTCAACTGTCGCCAAGCAGTAGTTTGTCCTGACATGTTGATGC
CGCCTTCCCCATGTTCTATTAAACCCTCGCTTGCACTTACCTCCTTCTTT
TTTTTGGCACTTGAATCTCGCCACAGAGAACAAGCGCAGAAAAGGTGGGG
AAGGGGAAGGCGAAGTCTGGCCAGGATGGCGTTATTCCCTGCAATCGGTG
ACAAGGTGGCAGGGCCCTAACGGTGGGGGGGTTGAGGATAGCTCTGACAA
ATCAGGCGATGGGAGGGAGAGCCTCTCGCTGTCTATAAAGGTGTGTGTCT
GTAAAGGTGTGCGCCAGAGCTTAAACGTCCCTGCTATAGTGTAGTCTAAA
TGTCCCTGCTATAGTGTAGTCTAAACGTCCCTGCTATAGTGTAGTCTAAA
TGTCCCTGCTACAGTGTAGTCTAAACGTCCCTGCTATAGTGTAGTCTAAA
TGTCCCTGCTATAGTGTAGTCTAAATGTCCCTGCTATAGTGTAGTCTAAA
TGTCCCTGCTATAGTGTAGTCTAAATGCGTGTTAGGTAGCAACGTGAACA
ACTACTCCAAAGTATTTTTTTCAGAGTTAAATATTTTGTGGTGTATTTGT
TCATATCCGGAGAGGAAAGCCG
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Coding sequence (CDS) from alignment at C-tenellus_contig7883:833..5154-

>mRNA_C-tenellus_contig7883.1.2 ID=mRNA_C-tenellus_contig7883.1.2|Name=mRNA_C-tenellus_contig7883.1.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=1482bp|location=Sequence derived from alignment at C-tenellus_contig7883:833..5154- (Choristocarpus tenellus KU2346)
ATGCAACAAGGAAAAAAAACTCAGAGAAACGTGCCGGGGAAGACCAAATT
ATGTACACAATACGCACTTATGAGGGAGGATCTAGGTGAACAGGTCGATC
GGGCTTTATCCCACTTCGACGAAGCTGTGCGTACGGGCACACTCGGGGGT
GAGAAGGATCCACTCGGTGCTCAAGAGAAACCAACGAGGAGGGAGTACCT
GGAGGAGTTAGCAAACCGAATCGTGTCCAGGCTTGACGAGCATGATCACG
ACAGGCCTCGCTGCCGCCCGTGGGACTATAATGATTTCACCCTTCGACTG
AGAACTTTCACGGCTCTCTGGTGGTTCGCCAAACCACAAGCTGTCTCTCC
CCTTGTGTGTGCAAGATACGGATGGAGGAACACCGCTAGGGACGAACTGT
CTTGTGAATTCTGCGCAGTAAGGCTTACTTTCCCAGGTTCTAATAAGGGT
TCGACATCATTTTCTGGCTCTGAATGCACATCGTTCGCCGCACGTCTGTC
CTCGGGTCATGATGATATCTGTCCTTGGGCCGGCAACCCGTGCTCGGAAG
ATTTTCTGAAACTACCAACCATGGCAGACGAAGATCTACGGCGCGGTCTT
CTTGCCCGCTTCGACAGCCTCCTCCCTCTGGCCCAGGCTGGAGCCTTGCC
TGAAGTTGCACTACCAGCAAGCTTTGCCGAGTACTGTCCTGGGGGATTAG
AAAGGCTAGCTGCTAAGGTAAGAGGCATTAAGGGAGAGGTGAGGGACAAG
GAGGTTGCCAATGCAGGCGTTGGTGATGCCTCATCAAGGGGATGCCGTGG
AGTTGGGAGCAAGGATAGCAGCGTTCAGGAGAAGGGTGGGGGAAAGGGGG
CAGTTAGTCTTCTGCATAATTTGGGGGATGACATCTTGGGTAAAGCAGCA
GCAATAGCAGTGTTTGGCTGGCGTGCAGTTGATTCAATCCCTCAGATGGC
TGGCAGCCCCTCCCCTGGAGGAGGCAAACCCCGCCTCTGTTGTGCCCTCT
GTGACCGCCGCTTAGCCACTGAGAATTTCCTTTGCCTTAGCCCTGCTGGG
CCTACTAGGTCGGGTCCAGGGAACACAGGGGCTGATGTCTCCAGTTGTGG
CACCGGAGACAAGGGAGGAAGCAATCATAACGCCATTATCTCTACAAGTG
ACATCCAAAACCGAAAGAGGAGACGCCTGTCTGGTGATCTGGTAAAGCCC
ATGGACCCTGTGGCGGAACACCGCTCCTTCTGCCCCTGGGCTGAGGTGCA
GGTGCTGTTGGAAGAGAACAAGCGCAGAAAAGGTGGGGAAGGGGAAGGCG
AAGTCTGGCCAGGATGGCGTTATTCCCTGCAATCGGTGACAAGGTGGCAG
GGCCCTAACGGTGGGGGGGTTGAGGATAGCTCTGACAAATCAGGCGATGG
GAGGGAGAGCCTCTCGCTGTCTATAAAGGTGTGTGTCTGTAAAGGTGTGC
GCCAGAGCTTAAACGTCCCTGCTATAGTGTAG
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