mRNA_C-tenellus_contig7841.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6H5JZE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZE1_9PHAE) HSP 1 Score: 193 bits (490), Expect = 2.260e-61 Identity = 96/117 (82.05%), Postives = 105/117 (89.74%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 372 QDAI YTECLD++P K S LAIKCYSNRSACYKQLSNFD TV+DT+AVLE EP NVKAL+RRAQAFEAIERYRFALQDVRTVL MP ++VG+AN LANGMQHRLNRVVQQLKN+S Sbjct: 19 QDAIVKYTECLDSLPDKRSELAIKCYSNRSACYKQLSNFDATVEDTTAVLEVEPENVKALVRRAQAFEAIERYRFALQDVRTVLTMPPEKVGSANLSLANGMQHRLNRVVQQLKNAS 135
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A836CLV7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV7_9STRA) HSP 1 Score: 184 bits (466), Expect = 2.710e-55 Identity = 90/117 (76.92%), Postives = 101/117 (86.32%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 372 +DAIK YT+C+D + + LA+KC+SNRSACYKQLSNFDG ++DTSAVLE EP NVKAL+RRAQAFEAIERYR+ALQDVRTVL MP DQVGAAN LANGMQHRLNRVVQQLK S Sbjct: 204 EDAIKKYTQCIDALGDRHHALALKCFSNRSACYKQLSNFDGVIEDTSAVLEVEPGNVKALVRRAQAFEAIERYRYALQDVRTVLAMPPDQVGAANISLANGMQHRLNRVVQQLKQDS 320
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6U1PBN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1PBN3_9STRA) HSP 1 Score: 178 bits (452), Expect = 3.180e-55 Identity = 86/116 (74.14%), Postives = 101/116 (87.07%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNS 369 ++AI Y++CLD I + S LAIKC+ NRSACYKQLSNFDG + D + VLE +PNNVK+L+RRAQAFEA ERYR+ALQDVRTVL MPMDQVG+AN+QLANGMQHRLNRVVQQLKN+ Sbjct: 46 EEAIDKYSKCLDAIGNSESELAIKCFLNRSACYKQLSNFDGVISDCTMVLEVDPNNVKSLVRRAQAFEACERYRYALQDVRTVLQMPMDQVGSANYQLANGMQHRLNRVVQQLKNN 161
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A6V1KEM3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KEM3_HETAK) HSP 1 Score: 176 bits (447), Expect = 1.970e-52 Identity = 86/117 (73.50%), Postives = 100/117 (85.47%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 372 + AI+ YT+CLD + K+S LAIKCYSNRSACYKQLSNFDG + D + V+EA+P NVKAL+RRAQAFEA ERYRFALQDVRTVL P + VG AN+QLANGMQHRLNRVVQQLK++S Sbjct: 204 EGAIQKYTQCLDALSDKSSELAIKCYSNRSACYKQLSNFDGVISDCTMVIEAQPENVKALVRRAQAFEACERYRFALQDVRTVLAQPFELVGQANYQLANGMQHRLNRVVQQLKSAS 320
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: D7FPF1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF1_ECTSI) HSP 1 Score: 172 bits (436), Expect = 7.190e-51 Identity = 88/117 (75.21%), Postives = 97/117 (82.91%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKNSS 372 +DAI YTECLD++P K S LAIKCYSNRSACYKQLSNFD TV+DT+AVLE EP NVKAL+RRA YRFALQDVRTVL MP D+VG+AN LANGMQHRLNRVVQQLKN+S Sbjct: 204 EDAIVKYTECLDSLPDKRSELAIKCYSNRSACYKQLSNFDATVEDTTAVLEVEPENVKALVRRA--------YRFALQDVRTVLTMPQDKVGSANLSLANGMQHRLNRVVQQLKNAS 312
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S1CX05_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CX05_CYCTE) HSP 1 Score: 163 bits (413), Expect = 2.730e-47 Identity = 79/115 (68.70%), Postives = 94/115 (81.74%), Query Frame = 1 Query: 28 AIKAYTECLDNIPSK---TSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 363 AI+ YT+CLDN+ + SPLA+K YSNR+ACYKQ+SNFDGT+ D + VLE EP NVKAL+RRAQAFE +ERYRFALQD++TVL MP +VG +NF L NGMQHRLNR VQQLK Sbjct: 206 AIEEYTKCLDNLQKEGKAESPLALKAYSNRAACYKQISNFDGTISDCTMVLEIEPENVKALIRRAQAFEGVERYRFALQDIKTVLSMPFAKVGKSNFDLCNGMQHRLNRTVQQLK 320
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S3P6E4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6E4_9STRA) HSP 1 Score: 162 bits (411), Expect = 5.720e-47 Identity = 81/117 (69.23%), Postives = 94/117 (80.34%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKT---SPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 363 ++AI YT+CL + SK SPLA+K YSNR+ACYKQ+SNFDGT+ D +AVLE EP+NVKAL+RRAQAFE +ERYRFALQDV+TVL MP QVG ANF L NGMQHRL R V QLK Sbjct: 204 ENAIAEYTKCLKQLESKGQQGSPLAVKTYSNRAACYKQISNFDGTIADCTAVLEVEPDNVKALIRRAQAFEGVERYRFALQDVKTVLQMPSAQVGKANFDLCNGMQHRLQRTVNQLK 320
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S2DVE1_9STRA (Hypothetical protein n=2 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S2DVE1_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.110e-46 Identity = 79/117 (67.52%), Postives = 96/117 (82.05%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSK---TSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 363 + AI+ YT+C+D + + S LA+K YSNR+ACYKQ+SNFDGTV+D +AVLE +P NVKAL+RRAQA E +ERYRFALQD++TVL MP D+VG ANF LANGMQHRLNR VQQLK Sbjct: 205 EGAIEEYTKCIDTLRADGKGQSELAMKAYSNRAACYKQISNFDGTVEDCTAVLEVDPENVKALIRRAQALEGLERYRFALQDIKTVLSMPFDKVGKANFDLANGMQHRLNRTVQQLK 321
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S2VAY3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAY3_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.890e-46 Identity = 77/116 (66.38%), Postives = 92/116 (79.31%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPS--KTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLK 363 + AI YT+CLD + K S LA+K +NR+ACYKQ+SNFDGT++D +AVLE EP NVKAL+RRAQAFE +ERYRFALQDV+TVL MP +VG ANF L NGMQHRL+R V QLK Sbjct: 40 EPAIVEYTKCLDGLKGAEKQSELALKALANRAACYKQISNFDGTIEDCTAVLEVEPENVKALIRRAQAFEGVERYRFALQDVKTVLSMPYQKVGKANFDLCNGMQHRLSRTVAQLK 155
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Match: A0A7S3GT25_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GT25_9STRA) HSP 1 Score: 157 bits (396), Expect = 8.730e-45 Identity = 75/115 (65.22%), Postives = 97/115 (84.35%), Query Frame = 1 Query: 22 QDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVQDTSAVLEAEPNNVKALMRRAQAFEAIERYRFALQDVRTVLHMPMDQVGAANFQLANGMQHRLNRVVQQLKN 366 + AIKAYT+CLD++ K+S LA+KCY+NR+AC+KQLSNF+GT+ D++AVLE +P++VKAL+RRAQAFEA ERY+ ALQDVR VL +D VG F LANGMQHRLN+V+ QL+N Sbjct: 204 EGAIKAYTKCLDSMSDKSSELALKCYNNRAACHKQLSNFEGTISDSTAVLEYKPDDVKALVRRAQAFEACERYKSALQDVRQVLAFGVDVVGKPTFDLANGMQHRLNKVIAQLRN 318 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7841.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7841.1.1 >prot_C-tenellus_contig7841.1.1 ID=prot_C-tenellus_contig7841.1.1|Name=mRNA_C-tenellus_contig7841.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=125bp IFSSPPKQDAIKAYTECLDNIPSKTSPLAIKCYSNRSACYKQLSNFDGTVback to top mRNA from alignment at C-tenellus_contig7841:313..1205+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7841.1.1 ID=mRNA_C-tenellus_contig7841.1.1|Name=mRNA_C-tenellus_contig7841.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=893bp|location=Sequence derived from alignment at C-tenellus_contig7841:313..1205+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7841:313..1205+ >mRNA_C-tenellus_contig7841.1.1 ID=mRNA_C-tenellus_contig7841.1.1|Name=mRNA_C-tenellus_contig7841.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=375bp|location=Sequence derived from alignment at C-tenellus_contig7841:313..1205+ (Choristocarpus tenellus KU2346)back to top |