prot_C-tenellus_contig7830.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7830.1.1
Unique Nameprot_C-tenellus_contig7830.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length48
Homology
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: C1MT94_MICPC (SNF2 super family (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MT94_MICPC)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NPAVE+QA+DRVHRLGQT  VTV RF   DT+E+KMLELQ
Sbjct:  772 NPAVEEQAMDRVHRLGQTKDVTVVRFAATDTIEEKMLELQ 811          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A8K1CQ45_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQ45_PYTOL)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VEDQAIDRVHRLGQT  V VKR+VV DTVED +L+LQ
Sbjct: 1020 NPGVEDQAIDRVHRLGQTRDVIVKRYVVEDTVEDMILQLQ 1059          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A6H5KHD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHD4_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NPAVE+QAIDR+HRLGQ   V+VKRFVV+ TVEDKML LQ
Sbjct: 1545 NPAVEEQAIDRIHRLGQLNEVSVKRFVVSGTVEDKMLALQ 1584          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: H3GRS2_PHYRM (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GRS2_PHYRM)

HSP 1 Score: 62.0 bits (149), Expect = 5.710e-10
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VEDQA+DRVHRLGQT  V VKR+VV DTVED +L+LQ
Sbjct:  994 NPGVEDQAVDRVHRLGQTQDVIVKRYVVEDTVEDMILQLQ 1033          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A6A3Z681_9STRA (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z681_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.710e-10
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VEDQA+DRVHRLGQT  V VKR+VV DTVED +L+LQ
Sbjct: 1016 NPGVEDQAVDRVHRLGQTQDVIVKRYVVQDTVEDMILQLQ 1055          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A2K1IG02_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IG02_PHYPA)

HSP 1 Score: 61.6 bits (148), Expect = 7.810e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NPAVE+QA+DRVHRLGQT  VTV R +V DT+ED++LELQ
Sbjct:  810 NPAVEEQAMDRVHRLGQTRDVTVVRLIVTDTIEDRILELQ 849          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A662XF88_9STRA (RanBP-type and C3HC4-type zinc finger-containing protein 1 n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF88_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.810e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VE+QA+DRVHRLGQT  V VKR+VV+DTVED +L+LQ
Sbjct:  995 NPGVEEQAVDRVHRLGQTRDVLVKRYVVSDTVEDMLLQLQ 1034          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A662Y6B2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y6B2_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.810e-10
Identity = 29/40 (72.50%), Postives = 35/40 (87.50%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VE+QA+DRVHRLGQT  V V+R+VV+DTVED ML+LQ
Sbjct: 1014 NPGVEEQAVDRVHRLGQTQDVLVRRYVVSDTVEDMMLQLQ 1053          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A3F2RHC6_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RHC6_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.140e-9
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VE+QAIDRVHRLGQT  V VKR+VV DTVED +L+LQ
Sbjct:  165 NPGVEEQAIDRVHRLGQTRDVMVKRYVVNDTVEDMILQLQ 204          
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Match: A0A2P4YH81_9STRA (DNA repair protein RAD5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin, p n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YH81_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-9
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQ 40
            NP VE+QAIDRVHRLGQT  V VKR+VV DTVED +L+LQ
Sbjct:  172 NPGVEEQAIDRVHRLGQTQDVIVKRYVVNDTVEDMILQLQ 211          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7830.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
C1MT94_MICPC4.180e-1075.00SNF2 super family (Fragment) n=1 Tax=Micromonas pu... [more]
A0A8K1CQ45_PYTOL4.180e-1077.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6H5KHD4_9PHAE4.180e-1077.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
H3GRS2_PHYRM5.710e-1075.00RanBP-type and C3HC4-type zinc finger-containing p... [more]
A0A6A3Z681_9STRA5.710e-1075.00RanBP-type and C3HC4-type zinc finger-containing p... [more]
A0A2K1IG02_PHYPA7.810e-1072.50Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A662XF88_9STRA7.810e-1072.50RanBP-type and C3HC4-type zinc finger-containing p... [more]
A0A662Y6B2_9STRA7.810e-1072.50Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3F2RHC6_9STRA1.140e-975.00Helicase C-terminal domain-containing protein n=1 ... [more]
A0A2P4YH81_9STRA1.200e-975.00DNA repair protein RAD5, SWI/SNF-related matrix-as... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 1..44
e-value: 5.7E-15
score: 57.1
NoneNo IPR availablePANTHERPTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDcoord: 1..40
NoneNo IPR availablePANTHERPTHR45626:SF31ATP-DEPENDENT DNA HELICASE (EUROFUNG)coord: 1..40
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7830contigC-tenellus_contig7830:446..589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7830.1.1mRNA_C-tenellus_contig7830.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7830 446..589 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7830.1.1 ID=prot_C-tenellus_contig7830.1.1|Name=mRNA_C-tenellus_contig7830.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=48bp
NPAVEDQAIDRVHRLGQTLAVTVKRFVVADTVEDKMLELQVGTVLIC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase