mRNA_C-tenellus_contig7767.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: D7G2T1_ECTSI (Putative transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T1_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.670e-74 Identity = 139/281 (49.47%), Postives = 194/281 (69.04%), Query Frame = 1 Query: 49 VAALVMGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEFTWQLALGLLIVTGSCISWSSRS---KWPLIVGLPIAITLIVYAIFDRSKFEGYSSSS--PLSKWSEGTAGTISFREISGYG-SYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFIGTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDIS 873 VA V+ SA S VS IPTALR+G GCGISVLVSVLG R++G+L + F+ FTWQ+ +G I+T +C + KW ++G+P+ IT+ +YA+ DRSKF+GYS + PLS W G GTI+F E+ YWFYI R S+ INV+SILLIL+DA+CL+D+R K ++D IG +KKFR M +P MS+ GN +GVTTQAAFV++++ +F G +TGL++VVTG LLL+ ++WPL LLAP HV+GAL + +++RFF +K +D++ Sbjct: 82 VAPSVLYSAPETSFVSLIPTALRLGAGCGISVLVSVLGMRNIGVLVNNSFSLQAFTWQIIVGFGIITAACGKAAPEKQLKKWMHVLGVPMVITVAIYAVLDRSKFQGYSLADHPPLSNWGMGAFGTINFSELRETPRKYWFYISRTFLSVNINVSSILLILIDAVCLEDVRTKVKSTREVDFSNAIGGTKKFRSMACAIPCMSLVGNFMGVTTQAAFVQSMILVFAGGKTGLSAVVTGALLLMTTVMWPLLPLLAPAHVSGALTVVISLRFFTVIKMIDVN 362
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A6I6DSG9_9MICO (NCS2 family permease n=1 Tax=Microbacterium oryzae TaxID=743009 RepID=A0A6I6DSG9_9MICO) HSP 1 Score: 75.5 bits (184), Expect = 1.350e-10 Identity = 78/307 (25.41%), Postives = 138/307 (44.95%), Query Frame = 1 Query: 79 RLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEF----TWQLALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYA-----IFDRSKFEGYSSSSPLSKWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSI----LLILMDALCLQDMRKDSKGMTKIDTHKFI----GTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGL 948 R +V +PT L+ +G GI + ++++G + G +TGDG TW + + ++ + + + + K +++ + +A L + I DRS+ G +S+P G I+ + S G F ++ +V +I L++L+ L L D M I + G + + + ++ L ++ G V++ AFVE+ + GARTGLASVVTG+ LL+ L PL V L P + V V +D + L + ++I+PFT+ DG+ Sbjct: 141 REAVFRAVPTPLKTAIGAGIGLFITLIGLANAGFVTGDGATILALGNLGTWPILVFVVGLVLAIVLHARHVKGAILISILVATALAIILENTLHIGDRSENPGGFNSAPR------FTGVIAVPDFSLIGQ---------FDLLGSVQNIGVVTLVLLVFTLLLADFFDTMGTMVAIGGEAGLLDKQGNPPRTKQILIVDSLGAVAGGVGSVSSNTAFVESTAGVGDGARTGLASVVTGIAFLLSTLFAPL-VALVPYEAAAPALVLVGFLMLTQVAGIDWKNIEVALPAFLTIVIMPFTYSIADGI 431
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A2W5YH25_9MICO (NCS2 family permease n=1 Tax=Xylanimonas oleitrophica TaxID=2607479 RepID=A0A2W5YH25_9MICO) HSP 1 Score: 73.6 bits (179), Expect = 5.620e-10 Identity = 77/304 (25.33%), Postives = 134/304 (44.08%), Query Frame = 1 Query: 79 RLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEF----TWQLALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGTAGTISFREISG------YGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFI----GTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGL 948 R +V +P L+ +G GI + ++++G + G +TGDG TW + + ++ + + + W + K +++ + +A L V I + + G S E AG S SG +G + L SF + VT ILL+ +L L D M + + G K + + V+ + ++ G V++ ++VE+ + GARTGLASVVTG L LL L P+ V L P +FV + +D + + + ++ +PFT+ DG+ Sbjct: 145 REAVFRAVPVELKTAIGVGIGLFITLIGLANAGFVTGDGATVLALGNLGTWPILVFVVGLVLTIVLWVRKVKGAMLIAILVATVLAV--ILENTLHIGARSE-------ENPAGFNSAPTFSGVVEVPDFGILGHFSLLGSFQSIGVVTVILLVF--SLLLADFFDTMGTMVAVGGEAKLLDEQGNPPKTKQILVVDSVAAIAGGMGSVSSNTSYVESTAGVGEGARTGLASVVTGGLFLLATFLSPI-VALVPYEAAAPALVFVGFLMLTQIAGIDWKNVEIAIPAFLTIITMPFTYSIADGI 436
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A1H0D445_9BACI (Putative MFS transporter, AGZA family, xanthine/uracil permease n=2 Tax=Bacillaceae TaxID=186817 RepID=A0A1H0D445_9BACI) HSP 1 Score: 72.8 bits (177), Expect = 8.010e-10 Identity = 81/324 (25.00%), Postives = 150/324 (46.30%), Query Frame = 1 Query: 22 LAAQFVSNFVAALVMGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTG---------DGFAPPEFTWQLALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFIGTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGLCIALLM 966 LA FV+ + ++ + + + S IP +L+ + GI +L+ ++G + G++TG D +P T +GL+I I + L+ L I IT ++ F + FEG S + P + G G +S+ + G+ F++ ISF++VI +I LI SK + + + S K + + ++S G G + A VE+ I G RTGL S+VTG+L L+++L P+ + + P + I + + ++ ++ I L L ++ +++IP T+ DG+ I ++ Sbjct: 100 LAMVFVAGLIFIVIAFTPLAKVITSSIPNSLKEAITIGIGILLILIGFDNAGIITGSEHTLLAIGDLSSPQAVT--TFIGLIITV---ILFVKNIPGNLL--LSILITSLLSIWFGGATFEGISLTIPSLQEYIGVFGQLSWAQA---GNLVFWLTSISFAMVIVFENIGLI----------HGHSKMLNRYE-------SDKTSLQATAISVLSSG--IFGTSPTVASVESAAGITAGGRTGLTSIVTGLLFLVSILFIPV-IKMVPTSAVSPILILIGVLMLQNIVNISIDDLTESLPALLIIVLIPLTYSIADGMAIGFVL 393
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: UPI00135822EF (NCS2 family permease n=2 Tax=Promicromonosporaceae TaxID=85017 RepID=UPI00135822EF) HSP 1 Score: 72.4 bits (176), Expect = 1.310e-9 Identity = 75/313 (23.96%), Postives = 140/313 (44.73%), Query Frame = 1 Query: 37 VSNFVAALVMGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEF----TWQLALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGT-AGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFI----GTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGL 948 + + L++ + R +V +P L+ +G GI + ++++G + G ++G+G +W + + ++ + + + W + K L++ + +A T++ + + S +P S T G + ++ +G + L SF + VT ILL+ +L L D M + + G K + + ++ L + G V++ A+VE+ + GARTGLASVVTGV LL L PL V L P +FV V +D L + + + ++PFT+ DG+ Sbjct: 132 IEGLIILLLVLTGFREAVFRAVPVELKTAIGVGIGLFITLIGLTNAGFVSGEGSTILSLGNLGSWPIVVFVVGLVLAIVLWVRKVKGALLIAI-LAATVLAVILENTLHIGARSEDNPTGFNSAPTFTGVV---DVPDFGLLGHFSLLGSFENIGVVTVILLVF--SLLLADFFDTMGTMVAVGAEARLLDAEGNPPKSKQILIIDSLAAAAGGMGSVSSNTAYVESTSGVGEGARTGLASVVTGVAFLLATFLSPL-VALVPYEAAAPALVFVGFLMMTQVAGIDWKKLDIAIPAFLTIALMPFTYSISDGI 437
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A4S3PJW7_9BACI (NCS2 family permease n=8 Tax=Bacillaceae TaxID=186817 RepID=A0A4S3PJW7_9BACI) HSP 1 Score: 72.0 bits (175), Expect = 1.410e-9 Identity = 81/324 (25.00%), Postives = 146/324 (45.06%), Query Frame = 1 Query: 22 LAAQFVSNFVAALVMGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLT---------GDGFAPPEFTWQLALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFIGTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGLCIALLM 966 LA FVS + ++ + + + S IP +L+ + GI VL+ ++G + G++T GD +P +GL+I I + P + L I IT ++ +F +K+E S S+P G G +S+ E G+ F++ IS ++V+ +I LI S + + + S K + V ++S G G + A VET I G RTGL S+VTGV+ LL+ML P+ + + P + I + + ++ ++ + ++ +++IP T+ DG+ I ++ Sbjct: 100 LAMVFVSGLIFVVIAFTPLAKVITSSIPNSLKEAISIGIGVLLILIGFDNAGIITSSEHTLLAIGDLSSPSVIV--TFIGLIITVLLFIK-----QVPGNLLLSIFITSVLSILFGGAKYENISFSTPDFHEYFGVFGQLSWAEA---GNLVFWLTSISLAMVLVFENIGLI----------HGHSNMLNRPE-------SSKKSLQATAVSVLSSG--VFGTSPTVASVETAAGITAGGRTGLTSIVTGVMFLLSMLFIPV-IKMVPASAVSPILILIGVLMLQNIVNISMDDFTESFPALLIIVLIPLTYSIADGMAIGFIL 393
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: UPI001C8E850B (NCS2 family permease n=1 Tax=Mesobacillus maritimus TaxID=1643336 RepID=UPI001C8E850B) HSP 1 Score: 71.2 bits (173), Expect = 2.490e-9 Identity = 79/323 (24.46%), Postives = 149/323 (46.13%), Query Frame = 1 Query: 22 LAAQFVSNFVAALVMGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEFTWQLALGLLIVTGSCISWSSR--------SKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFIGTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGLCIALLM 966 LA F + + ++ + + + S IP +L+ + GI +L+ ++G + G++T E T LA+G L + + I++ P + L I IT ++ IF S+FEG S S+P +S+ + G++ F++ IS ++V+ +I LI +K + + + S K + V ++S G G + A VE+ I G RTGL S+VTG+L L+++L P+ ++ P V+ L I + + +V + + L ++ +++IP T+ DG+ I ++ Sbjct: 100 LAMVFTAGIIFIIIAFTPLARVITSSIPDSLKEAISVGIGILLILIGFDNAGIITSS-----EHT-LLAIGDLSSSSAIITFIGLLITFLLFIRNVPGNLLLSIIITSVLAIIFGGSQFEGISFSAPSFGEYSNVFAQLSWAQA---GNFIFWLTSISLAMVLVFENIGLI----------HNHTKMLDRTE-------SSKKSLQATAVSVLSSG--VFGTSPTVASVESAAGITAGGRTGLTSIVTGLLFLISLLFIPVIKIVPPSAVSPVL-ILIGVLMLQNVVHIKMDDLTESFPALLIIVLIPLTYSIADGMAIGFIL 393
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A3N0DNW4_9ACTN (NCS2 family permease n=2 Tax=Marmoricola solisilvae TaxID=1542737 RepID=A0A3N0DNW4_9ACTN) HSP 1 Score: 70.5 bits (171), Expect = 5.190e-9 Identity = 81/310 (26.13%), Postives = 134/310 (43.23%), Query Frame = 1 Query: 79 RLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEF--TWQLA--------LGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLS------KWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFI----GTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGL 948 R +V +P L++ + GI + ++ +G G P + T +LA +GLL+V W + K +++ + IA T++ + F G S +PL KW + T F I + L S+ VT ILLI L L D MT I + GT + + ++ L ++ G A GV++ +++E+ + GARTGLASVVTGVL L + PL ++ + AL + V VK +D L + + ++++PFT+ G+ Sbjct: 134 REAVFHAVPAPLKIAISVGIGLFITFIGFFDAGFTRPGSGTPVQLGPTGELAGWPVLVFVIGLLLVIAL---WVRKVKGAILISI-IATTILAIIVESIGDFGGKSDKNPLGWSLVTPKWPDKVFDTPHFHTIGHFN------LLDSWGDAGTVTVILLIF--TLMLADFFDTMGTMTAIGAEAGLLDEDGTPPNTQKILIVDSLAAVAGGAAGVSSNTSYIESASGVGEGARTGLASVVTGVLFLAAIFFAPLVQIIPSEAAVPAL-VLVGFLMMQQVKGIDWDDLEIAIPAFLTIVLMPFTYSITVGI 430
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A2N5K2H6_9CHLR (NCS2 family permease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2N5K2H6_9CHLR) HSP 1 Score: 70.5 bits (171), Expect = 6.100e-9 Identity = 44/119 (36.97%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 646 GNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGLCIALLMAFICEQSLRILS 1002 G GV++ ++E+ + GARTGLASVVTG+L LL + L P L+ P+ AL I V FA+V+++D+S L G ++ L+++P TF +G+ F+C LR++S Sbjct: 397 GGLFGVSSVTTYIESAAGVSEGARTGLASVVTGLLFLLALALAPFAGLVPPEATAPAL-IIVGFLMFAAVREIDVSNLLDGFPALITLIMMPLTFSITNGIG----AGFVCYAFLRLVS 510
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Match: A0A3D0RZY3_9ACTN (Permease n=1 Tax=Nocardioides sp. TaxID=35761 RepID=A0A3D0RZY3_9ACTN) HSP 1 Score: 69.3 bits (168), Expect = 1.220e-8 Identity = 79/309 (25.57%), Postives = 138/309 (44.66%), Query Frame = 1 Query: 79 RLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLT-----GDGFAPPEFT-------WQL---ALGLLIVTGSCISWSSRSKWPLIVGLPIAITLIVYAIFDRSKFEGYSSSSPLSKWSEGTAGTISFREISGYGSYWFYILRISFSIVINVTSILLILMDALCLQDMRKDSKGMTKIDTHKFI----GTSKKFRIMGVLVPLMSMGGNALGVTTQAAFVETLVSIFGGARTGLASVVTGVLLLLNMLLWPLNVLLAPDHVTGALAIFVTIRFFASVKDVDISYLPHGLAVVMPLLIIPFTFEFVDGL 948 R +V +PTAL+ + GI + ++++G G + + P + W + A G+L+V W + K +++ + +A T++ + EG+S + P W + T SF + + L SF + V+++LLI L L D MT I + G + + V+ L + G GV++ A++E+ + GARTGLASVVTGVL LL +++ PL V L P A + V V+++D L + + ++++PFT+ G+ Sbjct: 143 RAAVFHAVPTALKTAISVGIGLFIALIGFVDAGFVARIPDAANTTVPVQLGSTGVLTGWPVVVFAFGMLLVIAL---WVRKVKGAILISI-VATTILALIVDALGASEGWSLNEPT--WPDEVFVTPSFDTVGHFS------LLGSFEQIGVVSTLLLIF--TLMLADFFDTMGTMTAIGAEAGLLDEDGIPPNTQRILVVDSLSAAAGGVGGVSSNTAYIESAAGVGEGARTGLASVVTGVLFLLTIMISPL-VKLIPSEAAVAALVLVGFLMMQQVREIDWLDLEIAIPAFLTIVLMPFTYSISVGI 436 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7767.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig7767.1.1 >prot_C-tenellus_contig7767.1.1 ID=prot_C-tenellus_contig7767.1.1|Name=mRNA_C-tenellus_contig7767.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=440bp MGSAIRLSVVSHIPTALRVGVGCGISVLVSVLGGRSVGLLTGDGFAPPEFback to top mRNA from alignment at C-tenellus_contig7767:1887..5969+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig7767.1.1 ID=mRNA_C-tenellus_contig7767.1.1|Name=mRNA_C-tenellus_contig7767.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4083bp|location=Sequence derived from alignment at C-tenellus_contig7767:1887..5969+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig7767:1887..5969+ >mRNA_C-tenellus_contig7767.1.1 ID=mRNA_C-tenellus_contig7767.1.1|Name=mRNA_C-tenellus_contig7767.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=1320bp|location=Sequence derived from alignment at C-tenellus_contig7767:1887..5969+ (Choristocarpus tenellus KU2346)back to top |