mRNA_C-tenellus_contig768.7.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI) HSP 1 Score: 328 bits (841), Expect = 9.560e-109 Identity = 169/226 (74.78%), Postives = 184/226 (81.42%), Query Frame = 3 Query: 255 LMEAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRG--GQGVRPRHGRGNAF----TPNSTGLAEGTPQESSGCC*G 914 + E G PK VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTK+ITAT+GT+CKMQIWDTAGQERFRAMAP+YYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNV + +LVLAIAC KTDMESKRVVSRARAE FA+ V G++ ETSAKENWGV+ELF +VCDR METRG ELRG G GR + F ++ G T ES G C G Sbjct: 1 MAEPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGCCG 226
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.060e-93 Identity = 138/180 (76.67%), Postives = 157/180 (87.22%), Query Frame = 3 Query: 282 PVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRGGQGV 821 PVEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTKKI G CKMQIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE+SF KMKDWVEEL+TNV + +LVLAIACNKTD+ES RVVSRARAEQ+++ + + ETSAKENWGV+E+F KV ++V+ETRG ++ G GV Sbjct: 10 PVEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQVSAGAGV 189
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK) HSP 1 Score: 274 bits (701), Expect = 1.830e-87 Identity = 132/185 (71.35%), Postives = 153/185 (82.70%), Query Frame = 3 Query: 252 LLMEAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELR 806 ++M + PPVEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A +GT CKMQIWDTAGQERFRAMA MYYRNAA A+VCFDI DEESF KMKDWV+EL+ NV + +LVLAIA KTD+E++R VSR RAEQ+A ++ L ETSAKENWGV+E+F RV+E RG ELR Sbjct: 1 MMMNSAGGLPPVEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELR 185
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA) HSP 1 Score: 253 bits (646), Expect = 2.300e-79 Identity = 119/172 (69.19%), Postives = 145/172 (84.30%), Query Frame = 3 Query: 288 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 803 EFK+V+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTKKI +NG CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F MKDWVEEL+TNV LV+AIACNK D+++++V SRARAE FA ++D ++ +TSAKEN+GVSELFT V ++V+ RG EL Sbjct: 15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHEL 185
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN) HSP 1 Score: 250 bits (638), Expect = 3.680e-78 Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 3 Query: 264 AGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRGGQGVRPRHGRGNAFTPNSTGLA 875 A L + EFK+V+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTKKI G CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F MKDWVEEL+TNV LV+AIACNK D+++++V SRARAEQFA ++ ++ +TSAKEN+GV+ELF V + V++ RG EL G PR G G P GL+ Sbjct: 2 AELSQKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGA-PRGGGGG---PGGRGLS 200
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA) HSP 1 Score: 241 bits (614), Expect = 2.320e-75 Identity = 116/166 (69.88%), Postives = 136/166 (81.93%), Query Frame = 3 Query: 288 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNV--AQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRV 779 EFK+ VLGDKGVGKTCLVLRFIEGYF+ QQSTIGAFFLTK + NG +CK+QIWDTAGQERFRAMAPMYYRNAA A+VC DI DEESF KMKDWVEE++ NV Q L + +A NKTD+E +RVVSRARAE+FA+++ + ETSA+ENWGV+ LF C+RV Sbjct: 1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACERV 165
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA) HSP 1 Score: 240 bits (612), Expect = 4.160e-74 Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 3 Query: 318 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 803 GVGKTCLVLRFIEG F KQQSTIGAFFLTKK+ +G++CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE SF MKDWV+ELR N L+LAIACNK D+ S RVVSR RAE FAS++ +L +TSAKEN GV+ELF KV +RV+E++G+EL Sbjct: 17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.570e-71 Identity = 117/187 (62.57%), Postives = 143/187 (76.47%), Query Frame = 3 Query: 246 SSLLMEAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTV-DGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 803 +++ A PK EFKVV+LGD+GVGKTCLVLRFIEG + +QQSTIGAFFLTKKI G CK+QIWDTAGQERFRAMAPMYYRNAA AVVCFD D+ +FQ M+ WVEELR NV +LV+AIA K+D++ R +R +AE+FAS++ D L+ ETSAK + GV ELF V +RV+E RG+EL Sbjct: 2 TAIFNSAAAPKS-YEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA) HSP 1 Score: 190 bits (483), Expect = 6.840e-55 Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 3 Query: 282 PVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVME 785 P EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K + G C +Q+WDTAGQERFRA+ PMYYR A A+VCFD+ E SF+ M+ WV+ELR N +V+AIA K D+E+ RVV + +A+++ L ETSAK N GV +LF + R++E Sbjct: 6 PQEFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A0M0LQE4_9EUKA (Gtp-binding protein rab11 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQE4_9EUKA) HSP 1 Score: 188 bits (477), Expect = 3.360e-54 Identity = 93/168 (55.36%), Postives = 123/168 (73.21%), Query Frame = 3 Query: 288 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETR 791 +FKVV+LG GVGKTCL LRF++ F STIGA FL K++ N V +QIWDTAGQERFR+MAP+YYR A A++ F I DE SF+K+K+WV EL++NV + LVLAIACNK D+ +R+VS A+Q+AS++ L++ETSAK N GVS+LF +V R+ T+ Sbjct: 13 DFKVVILGASGVGKTCLGLRFVKDQFVTYTASTIGASFLVKELVFNNQKVT-LQIWDTAGQERFRSMAPLYYRGAVAAILVFSITDEASFEKLKEWVRELQSNVDEP-LVLAIACNKADLADQRIVSMETAQQYASSIGALIYETSAKSNTGVSQLFNEVARRLANTK 178 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig768.7.1 >prot_C-tenellus_contig768.7.1 ID=prot_C-tenellus_contig768.7.1|Name=mRNA_C-tenellus_contig768.7.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=218bp MEAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTback to top mRNA from alignment at C-tenellus_contig768:9729..12128- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig768.7.1 ID=mRNA_C-tenellus_contig768.7.1|Name=mRNA_C-tenellus_contig768.7.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2400bp|location=Sequence derived from alignment at C-tenellus_contig768:9729..12128- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig768:9729..12128- >mRNA_C-tenellus_contig768.7.1 ID=mRNA_C-tenellus_contig768.7.1|Name=mRNA_C-tenellus_contig768.7.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=654bp|location=Sequence derived from alignment at C-tenellus_contig768:9729..12128- (Choristocarpus tenellus KU2346)back to top |