prot_C-tenellus_contig768.7.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig768.7.1
Unique Nameprot_C-tenellus_contig768.7.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length218
Homology
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: D8LS40_ECTSI (Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS40_ECTSI)

HSP 1 Score: 327 bits (838), Expect = 1.980e-111
Identity = 168/222 (75.68%), Postives = 182/222 (81.98%), Query Frame = 0
Query:    2 EAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRG--GQGVRPRHGRGNAF----TPNSTGLAEGTPQESSGCC 217
            E G PK  VEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTK+ITAT+GT+CKMQIWDTAGQERFRAMAP+YYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNV + +LVLAIAC KTDMESKRVVSRARAE FA+ V G++ ETSAKENWGV+ELF +VCDR METRG ELRG    G     GR + F      ++ G    T  ES G C
Sbjct:    3 EPGAPKTSVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKQITATDGTICKMQIWDTAGQERFRAMAPLYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVPEGKLVLAIACTKTDMESKRVVSRARAEHFATEVGGIICETSAKENWGVNELFARVCDRAMETRGPELRGQASGGAAGTGGRKSKFGLSPAAHAAGFGGDTGAESGGGC 224          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S2XTR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTR6_9STRA)

HSP 1 Score: 288 bits (738), Expect = 9.530e-97
Identity = 138/180 (76.67%), Postives = 157/180 (87.22%), Query Frame = 0
Query:    9 PVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRGGQGV 188
            PVEFKVVVLGDKGVGKTCLVLRFIEGYF+PKQQSTIGAFFLTKKI    G  CKMQIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE+SF KMKDWVEEL+TNV + +LVLAIACNKTD+ES RVVSRARAEQ+++ +  +  ETSAKENWGV+E+F KV ++V+ETRG ++  G GV
Sbjct:   10 PVEFKVVVLGDKGVGKTCLVLRFIEGYFSPKQQSTIGAFFLTKKIQTEGGVNCKMQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDEDSFTKMKDWVEELKTNVPEGKLVLAIACNKTDLESNRVVSRARAEQYSAAIKAIYCETSAKENWGVNEIFEKVSEKVIETRGLQVSAGAGV 189          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3Y4J2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y4J2_HETAK)

HSP 1 Score: 273 bits (699), Expect = 3.640e-90
Identity = 131/176 (74.43%), Postives = 149/176 (84.66%), Query Frame = 0
Query:    8 PPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELR 183
            PPVEFKVVVLGDKGVGK+CLVLRFIEGYF+PKQQSTIGAFFL+K I A +GT CKMQIWDTAGQERFRAMA MYYRNAA A+VCFDI DEESF KMKDWV+EL+ NV + +LVLAIA  KTD+E++R VSR RAEQ+A ++  L  ETSAKENWGV+E+F     RV+E RG ELR
Sbjct:   10 PPVEFKVVVLGDKGVGKSCLVLRFIEGYFSPKQQSTIGAFFLSKTIEAADGTACKMQIWDTAGQERFRAMASMYYRNAAAAIVCFDITDEESFSKMKDWVQELKANVPEGRLVLAIAATKTDLEAQRAVSRGRAEQYAQSIGALCCETSAKENWGVTEVFEAAAARVLELRGPELR 185          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3NK22_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK22_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.670e-82
Identity = 119/172 (69.19%), Postives = 145/172 (84.30%), Query Frame = 0
Query:   11 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 182
            EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI  +NG  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV    LV+AIACNK D+++++V SRARAE FA ++D ++ +TSAKEN+GVSELFT V ++V+  RG EL
Sbjct:   15 EFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTSNGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAESFARSIDAIILDTSAKENFGVSELFTAVSEQVITLRGHEL 185          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: F0XY01_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY01_AURAN)

HSP 1 Score: 250 bits (639), Expect = 3.090e-81
Identity = 126/204 (61.76%), Postives = 154/204 (75.49%), Query Frame = 0
Query:    3 AGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDELRGGQGVRPRHGRGNAFTPNSTGLA 206
            A L +   EFK+V+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI    G  CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFD+ DE +F  MKDWVEEL+TNV    LV+AIACNK D+++++V SRARAEQFA ++  ++ +TSAKEN+GV+ELF  V + V++ RG EL    G  PR G G    P   GL+
Sbjct:    2 AELSQKNYEFKIVLLGDRGVGKTCLVLRFIEGLYNSRQQSTIGAFFLTKKIVTAQGDACKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDVTDESTFNTMKDWVEELKTNVVDKNLVIAIACNKADLDTRQV-SRARAEQFARSISAIVLDTSAKENFGVAELFAAVSEHVIKLRGQELCSTPGA-PRGGGGG---PGGRGLS 200          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A835ZBF8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF8_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.990e-78
Identity = 116/166 (69.88%), Postives = 136/166 (81.93%), Query Frame = 0
Query:   11 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNV--AQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRV 174
            EFK+ VLGDKGVGKTCLVLRFIEGYF+  QQSTIGAFFLTK +   NG +CK+QIWDTAGQERFRAMAPMYYRNAA A+VC DI DEESF KMKDWVEE++ NV   Q  L + +A NKTD+E +RVVSRARAE+FA+++   + ETSA+ENWGV+ LF   C+RV
Sbjct:    1 EFKICVLGDKGVGKTCLVLRFIEGYFSQNQQSTIGAFFLTKSLPV-NGVLCKLQIWDTAGQERFRAMAPMYYRNAAAAIVCCDITDEESFDKMKDWVEEIKMNVPVGQQGLAIVLALNKTDLEERRVVSRARAEEFAASIGAAVVETSARENWGVARLFECACERV 165          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S2BGJ2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BGJ2_9STRA)

HSP 1 Score: 240 bits (612), Expect = 5.400e-77
Identity = 115/162 (70.99%), Postives = 134/162 (82.72%), Query Frame = 0
Query:   21 GVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 182
            GVGKTCLVLRFIEG F  KQQSTIGAFFLTKK+   +G++CK+QIWDTAGQERFRAMAPMYYRNAA A+VCFDI DE SF  MKDWV+ELR N     L+LAIACNK D+ S RVVSR RAE FAS++  +L +TSAKEN GV+ELF KV +RV+E++G+EL
Sbjct:   17 GVGKTCLVLRFIEGTFTQKQQSTIGAFFLTKKVQLEDGSMCKIQIWDTAGQERFRAMAPMYYRNAAAAIVCFDITDENSFSTMKDWVQELRRNCQDRDLILAIACNKADLSSTRVVSRERAESFASSIKAILMDTSAKENEGVNELFQKVTERVIESQGEEL 178          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7S3ZPM5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPM5_9STRA)

HSP 1 Score: 231 bits (590), Expect = 7.210e-74
Identity = 117/181 (64.64%), Postives = 140/181 (77.35%), Query Frame = 0
Query:    3 AGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTV-DGLLFETSAKENWGVSELFTKVCDRVMETRGDEL 182
            A  PK   EFKVV+LGD+GVGKTCLVLRFIEG +  +QQSTIGAFFLTKKI    G  CK+QIWDTAGQERFRAMAPMYYRNAA AVVCFD  D+ +FQ M+ WVEELR NV   +LV+AIA  K+D++  R  +R +AE+FAS++ D L+ ETSAK + GV ELF  V +RV+E RG+EL
Sbjct:    8 AAAPKS-YEFKVVLLGDRGVGKTCLVLRFIEGLYNARQQSTIGAFFLTKKIKTARGDDCKIQIWDTAGQERFRAMAPMYYRNAAAAVVCFDGTDQRTFQTMRTWVEELRANVDDKKLVIAIAITKSDLDENRAETRRKAEEFASSINDALVLETSAKNDVGVRELFATVAERVIELRGEEL 187          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A7R9U6V0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V0_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.570e-57
Identity = 90/168 (53.57%), Postives = 117/168 (69.64%), Query Frame = 0
Query:    9 PVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVME 176
            P EFKVVV+G+K VGKT LVLRFI+G F P+QQ TIGAFF +K +    G  C +Q+WDTAGQERFRA+ PMYYR A  A+VCFD+  E SF+ M+ WV+ELR N     +V+AIA  K D+E+ RVV +     +A+++  L  ETSAK N GV +LF  +  R++E
Sbjct:    6 PQEFKVVVVGEKSVGKTSLVLRFIDGCFQPQQQPTIGAFFFSKHLVLAGGAACVLQVWDTAGQERFRAITPMYYRQAMGAIVCFDVTSEASFETMQGWVKELRENTEPGSIVIAIAATKADLEAARVVDQEGPRLYAASIGALYAETSAKANVGVQDLFVTLGQRMLE 173          
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Match: A0A0M0LQE4_9EUKA (Gtp-binding protein rab11 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQE4_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 7.960e-57
Identity = 93/168 (55.36%), Postives = 123/168 (73.21%), Query Frame = 0
Query:   11 EFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLTKKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESFQKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDGLLFETSAKENWGVSELFTKVCDRVMETR 178
            +FKVV+LG  GVGKTCL LRF++  F     STIGA FL K++   N  V  +QIWDTAGQERFR+MAP+YYR A  A++ F I DE SF+K+K+WV EL++NV +  LVLAIACNK D+  +R+VS   A+Q+AS++  L++ETSAK N GVS+LF +V  R+  T+
Sbjct:   13 DFKVVILGASGVGKTCLGLRFVKDQFVTYTASTIGASFLVKELVFNNQKVT-LQIWDTAGQERFRSMAPLYYRGAVAAILVFSITDEASFEKLKEWVRELQSNVDEP-LVLAIACNKADLADQRIVSMETAQQYASSIGALIYETSAKSNTGVSQLFNEVARRLANTK 178          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig768.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LS40_ECTSI1.980e-11175.68Rab50, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A7S2XTR6_9STRA9.530e-9776.67Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3Y4J2_HETAK3.640e-9074.43Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3NK22_9STRA2.670e-8269.19Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0XY01_AURAN3.090e-8161.76Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A835ZBF8_9STRA2.990e-7869.88P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2BGJ2_9STRA5.400e-7770.99Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3ZPM5_9STRA7.210e-7464.64Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7R9U6V0_9STRA1.570e-5753.57Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A0M0LQE4_9EUKA7.960e-5755.36Gtp-binding protein rab11 n=1 Tax=Chrysochromulina... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 152..174
score: 32.53
coord: 117..130
score: 24.72
coord: 35..51
score: 29.94
coord: 12..33
score: 50.62
coord: 54..76
score: 47.67
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 12..177
e-value: 9.4E-68
score: 241.1
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 14..177
e-value: 3.8E-9
score: -1.7
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 17..215
e-value: 0.0011
score: 4.1
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 9..177
e-value: 3.5E-25
score: 99.7
NoneNo IPR availableGENE3D3.40.50.300coord: 7..192
e-value: 6.3E-59
score: 200.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 181..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..217
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 11..176
NoneNo IPR availablePANTHERPTHR47977:SF13RAS-RELATED PROTEIN RAB-5Ccoord: 11..176
NoneNo IPR availablePROSITEPS51419RABcoord: 7..217
score: 29.329
IPR001806Small GTPasePFAMPF00071Rascoord: 13..175
e-value: 2.0E-52
score: 177.0
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 11..169
e-value: 1.1E-24
score: 85.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig768contigC-tenellus_contig768:10065..11871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig768.7.1mRNA_C-tenellus_contig768.7.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig768 9729..12128 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig768.7.1 ID=prot_C-tenellus_contig768.7.1|Name=mRNA_C-tenellus_contig768.7.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=218bp
MEAGLPKPPVEFKVVVLGDKGVGKTCLVLRFIEGYFAPKQQSTIGAFFLT
KKITATNGTVCKMQIWDTAGQERFRAMAPMYYRNAAVAVVCFDIMDEESF
QKMKDWVEELRTNVAQSQLVLAIACNKTDMESKRVVSRARAEQFASTVDG
LLFETSAKENWGVSELFTKVCDRVMETRGDELRGGQGVRPRHGRGNAFTP
NSTGLAEGTPQESSGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase