prot_C-tenellus_contig768.3.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig768.3.2
Unique Nameprot_C-tenellus_contig768.3.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length220
Homology
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.150e-54
Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0
Query:   90 GLMGGVKRWWEREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLS-KYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 219
            G+ GG++ WWER+GK D K Y  SLA+ALV+R+VA+EPR+IPSLSMFPTFEIGDQ AVDKLS K  R YQ+KDVVVF+PPP F +++ R   +ALIKR+IAVGGD V+IKDG +F+NG+EQFE Y FE+ E
Sbjct:   25 GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPE 155          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 1.010e-53
Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 0
Query:   90 GLMGGVKRWWEREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLS-KYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 219
            G+ GG++ WWER+GK D K Y  SLA+ALV+R+VA+EPR+IPSLSMFPTFEIGDQ AVDKLS K  R YQ+KDVVVF+PPP F +++ R   +ALIKR+IAVGGD V+IKDG +F+NG+EQFE Y FE+ E
Sbjct:   98 GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPE 228          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK)

HSP 1 Score: 146 bits (369), Expect = 8.810e-40
Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 0
Query:   92 MGGVKRWWE-REGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDG-LVFINGEEQFESYQFED 217
            + G+  W +  EGKED + Y  SLA+ALV+RT  +EPR+IPSLSM+PTF+IGDQ AVDKLSK  R YQ++DVVVF PP AF  ++ R G EALIKR++AV GD VEIKDG  +FINGE+Q E Y  ED
Sbjct:   86 LAGLINWAQSEEGKEDLRIYGTSLAVALVLRTFVVEPRWIPSLSMYPTFDIGDQLAVDKLSKVARPYQRRDVVVFTPPDAFSIFSDRRG-EALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNED 212          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS)

HSP 1 Score: 134 bits (336), Expect = 7.200e-36
Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 0
Query:  102 EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 219
            EGKED KTY  SL +AL++R + IEPRYIPSLSMFPTFE+GDQ AV+K++K  R + + +VVVFHPP  F +    T+R   EALIKRI+A  GD VE+  G +F+NG EQ E +  ED E
Sbjct:    7 EGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRIRPFSRNEVVVFHPPMKFREIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAE 127          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7R9WYP6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYP6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.140e-35
Identity = 73/155 (47.10%), Postives = 103/155 (66.45%), Query Frame = 0
Query:   73 DSDSTMEGDNGPEEQEGGLMGGVKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAF-------YDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 219
            DS ++   +N     E G++ G++RW +  EGKED KTY  SLA+AL++R   IEPR+IPSLSM+PTF++GDQ AV+K++K  +   +++VVVF+PP  F       Y    +   EALIKRI+A+ GD VE+K G ++ING+ Q E Y  ED E
Sbjct:   97 DSSASRNSNNNRANGEDGILSGIQRWLKSDEGKEDIKTYFTSLALALLLRFTIIEPRFIPSLSMYPTFDVGDQLAVEKVTKRIKPLYRREVVVFNPPATFREVIVNDYGQDPKRAKEALIKRIVAIEGDQVEVKKGKLYINGDLQNEPYTAEDAE 251          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S4ABF9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABF9_9STRA)

HSP 1 Score: 132 bits (331), Expect = 4.230e-34
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 0
Query:   89 GGLMGGVKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAF-------YDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 219
            G ++  +  WW   EG++D KTY  SL IAL++R   IEPRYIPSLSM+PTFE+GDQ AV+K++K  + + +++VVVF+PP  F       Y   +    EALIKRI+A+ GD VE+K G ++ING+EQ E +  ED E
Sbjct:   78 GSILDELGAWWNSDEGRDDVKTYFVSLGIALLLRFTIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIKPFYREEVVVFNPPQGFRDVMVGKYGQDSARAKEALIKRIVAIEGDEVEVKQGKLYINGDEQDEPFTAEDAE 216          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S3HGB1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGB1_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.740e-34
Identity = 63/114 (55.26%), Postives = 88/114 (77.19%), Query Frame = 0
Query:  102 EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYD-YTTRTGNEALIKRIIAVGGDTVEIKDG-LVFINGEEQFESY 213
            E +ED KT+  SL IAL  R + IEPR+IPSLSM+PTF++GDQ  VDK+S+ +R +Q++DVVVF+PPPAF +    R+  EALIKRI+A+ GDT+++K+G  ++INGE Q E +
Sbjct:    2 ESQEDIKTFLTSLTIALTFRALFIEPRFIPSLSMYPTFDVGDQLTVDKVSRNWRDFQRRDVVVFYPPPAFNEAINARSDGEALIKRIVALDGDTMQVKNGGTLYINGEAQAEDF 115          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: K0S0N9_THAOC (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N9_THAOC)

HSP 1 Score: 132 bits (331), Expect = 5.750e-34
Identity = 68/127 (53.54%), Postives = 91/127 (71.65%), Query Frame = 0
Query:   95 VKRWW-EREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFED 217
            V+ W+   EGKED +TY  SL IAL++R + IEPRYIPSLSM+PTFE+GDQ AV+K++K  R   + +VVVF+PP +F +    T+R   EALIKRI+A  GD VE+  G +F+NG+EQ E +  ED
Sbjct:  101 VQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIRPLNRNEVVVFNPPTSFKEIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAED 227          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S2C5D0_9STRA (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5D0_9STRA)

HSP 1 Score: 126 bits (317), Expect = 1.520e-33
Identity = 65/124 (52.42%), Postives = 91/124 (73.39%), Query Frame = 0
Query:   93 GGVKRWWEREGKE-DFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDYTTRTG------NEALIKRIIAVGGDTVEIKDGLVFINGEEQ 209
            GG++ +   E  + + K+Y  SL++AL++R + IEPRYIPSLSM+PTF++GDQ AV+K+SK +R  Q+KDVVVF+PP AF D T  T       +EALIKR+IAV GD VE++ G++ +NGE Q
Sbjct:   18 GGIQAFLSNEETQAEIKSYVVSLSVALLLRFLVIEPRYIPSLSMYPTFDVGDQLAVEKVSKLFRPQQRKDVVVFNPPQAFKDITQGTAGGERMKDEALIKRVIAVEGDVVEMRKGVLLVNGEAQ 141          
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6V1AJW1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AJW1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.600e-33
Identity = 69/130 (53.08%), Postives = 95/130 (73.08%), Query Frame = 0
Query:   95 VKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIK-DGLVFINGEEQFESYQFEDNE 219
            ++ W+   EGKED KTY  SL++AL++R + IEPRYIPSLSM+PTFE+GDQ AV+K++K  R + + +VVVF+PP  F +    ++R   EALIKRI+AV GDTVE+K  G +F+NG +Q E +  ED E
Sbjct:  100 IQEWFASDEGKEDVKTYTVSLSVALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIRPFNRNEVVVFNPPERFRELVGESSRKSKEALIKRIVAVEGDTVEVKMGGKLFVNGVQQDEPFTAEDAE 229          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KUG3_9PHAE1.150e-5466.41Mitochondrial inner membrane protease subunit n=1 ... [more]
D8LS42_ECTSI1.010e-5366.41Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A6T5N089_HETAK8.810e-4061.72Mitochondrial inner membrane protease subunit n=1 ... [more]
B8BZJ0_THAPS7.200e-3657.02Mitochondrial inner membrane protease subunit (Fra... [more]
A0A7R9WYP6_9STRA3.140e-3547.10Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S4ABF9_9STRA4.230e-3448.92Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S3HGB1_9STRA5.740e-3455.26Mitochondrial inner membrane protease subunit n=1 ... [more]
K0S0N9_THAOC5.750e-3453.54Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A7S2C5D0_9STRA1.520e-3352.42Mitochondrial inner membrane protease subunit (Fra... [more]
A0A6V1AJW1_9STRA1.600e-3353.08Mitochondrial inner membrane protease subunit n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 183..195
score: 54.95
coord: 197..216
score: 19.17
coord: 123..139
score: 39.36
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 111..213
e-value: 9.1E-21
score: 72.4
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 94..216
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 132..219
e-value: 1.4E-16
score: 62.6
NoneNo IPR availablePANTHERPTHR43390:SF1CHLOROPLAST PROCESSING PEPTIDASEcoord: 94..216
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..219
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..20
score: 6.0
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 108..216
e-value: 6.2E-25
score: 88.1
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 126..190
e-value: 2.45155E-14
score: 64.1439
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 185..197
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 132..139
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 121..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig768contigC-tenellus_contig768:5859..7752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig768.3.2mRNA_C-tenellus_contig768.3.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig768 4978..7800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig768.3.2 ID=prot_C-tenellus_contig768.3.2|Name=mRNA_C-tenellus_contig768.3.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=220bp
MRRMAGFNHPFVLSLLSIACLQSALAFLPRNGGRILSLGQTRGQGLKRGG
LALNTFYRSQTSFFILRSTETSDSDSTMEGDNGPEEQEGGLMGGVKRWWE
REGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKL
SKYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDG
LVFINGEEQFESYQFEDNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR019756Pept_S26A_signal_pept_1_Ser-AS
IPR036286LexA/Signal_pep-like_sf