mRNA_C-tenellus_contig768.3.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6H5KUG3_9PHAE (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUG3_9PHAE) HSP 1 Score: 183 bits (465), Expect = 2.780e-51 Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 1 Query: 316 GLMGGVKRWWEREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLS-KYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 705 G+ GG++ WWER+GK D K Y SLA+ALV+R+VA+EPR+IPSLSMFPTFEIGDQ AVDKLS K R YQ+KDVVVF+PPP F +++ R +ALIKR+IAVGGD V+IKDG +F+NG+EQFE Y FE+ E Sbjct: 25 GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDVVQIKDGSLFVNGQEQFEDYTFEEPE 155
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: D8LS42_ECTSI (Mitochondrial inner membrane protease subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS42_ECTSI) HSP 1 Score: 183 bits (465), Expect = 2.440e-50 Identity = 87/131 (66.41%), Postives = 108/131 (82.44%), Query Frame = 1 Query: 316 GLMGGVKRWWEREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLS-KYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 705 G+ GG++ WWER+GK D K Y SLA+ALV+R+VA+EPR+IPSLSMFPTFEIGDQ AVDKLS K R YQ+KDVVVF+PPP F +++ R +ALIKR+IAVGGD V+IKDG +F+NG+EQFE Y FE+ E Sbjct: 98 GIFGGIQEWWERDGKSDLKIYGTSLALALVVRSVALEPRFIPSLSMFPTFEIGDQLAVDKLSSKLSRPYQRKDVVVFYPPPKFREFSDRGKKDALIKRVIAVGGDAVQIKDGSLFVNGQEQFEDYTFEEPE 228
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6T5N089_HETAK (Mitochondrial inner membrane protease subunit n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5N089_HETAK) HSP 1 Score: 147 bits (371), Expect = 5.970e-37 Identity = 79/128 (61.72%), Postives = 97/128 (75.78%), Query Frame = 1 Query: 322 MGGVKRWWE-REGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDYTTRTGNEALIKRIIAVGGDTVEIKDG-LVFINGEEQFESYQFED 699 + G+ W + EGKED + Y SLA+ALV+RT +EPR+IPSLSM+PTF+IGDQ AVDKLSK R YQ++DVVVF PP AF ++ R G EALIKR++AV GD VEIKDG +FINGE+Q E Y ED Sbjct: 86 LAGLINWAQSEEGKEDLRIYGTSLAVALVLRTFVVEPRWIPSLSMYPTFDIGDQLAVDKLSKVARPYQRRDVVVFTPPDAFSIFSDRRG-EALIKRVVAVAGDVVEIKDGGHLFINGEKQEEKYTNED 212
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: B8BZJ0_THAPS (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZJ0_THAPS) HSP 1 Score: 134 bits (338), Expect = 2.660e-33 Identity = 69/121 (57.02%), Postives = 87/121 (71.90%), Query Frame = 1 Query: 352 EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 705 EGKED KTY SL +AL++R + IEPRYIPSLSMFPTFE+GDQ AV+K++K R + + +VVVFHPP F + T+R EALIKRI+A GD VE+ G +F+NG EQ E + ED E Sbjct: 7 EGKEDVKTYTVSLGVALLLRLLIIEPRYIPSLSMFPTFEVGDQLAVEKVTKRIRPFSRNEVVVFHPPMKFREIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGVEQEEPFTAEDAE 127
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7R9WYP6_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WYP6_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.310e-32 Identity = 73/155 (47.10%), Postives = 103/155 (66.45%), Query Frame = 1 Query: 265 DSDSTMEGDNGPEEQEGGLMGGVKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAF-------YDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 705 DS ++ +N E G++ G++RW + EGKED KTY SLA+AL++R IEPR+IPSLSM+PTF++GDQ AV+K++K + +++VVVF+PP F Y + EALIKRI+A+ GD VE+K G ++ING+ Q E Y ED E Sbjct: 97 DSSASRNSNNNRANGEDGILSGIQRWLKSDEGKEDIKTYFTSLALALLLRFTIIEPRFIPSLSMYPTFDVGDQLAVEKVTKRIKPLYRREVVVFNPPATFREVIVNDYGQDPKRAKEALIKRIVAIEGDQVEVKKGKLYINGDLQNEPYTAEDAE 251
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S4ABF9_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABF9_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.450e-31 Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 1 Query: 313 GGLMGGVKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAF-------YDYTTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFEDNE 705 G ++ + WW EG++D KTY SL IAL++R IEPRYIPSLSM+PTFE+GDQ AV+K++K + + +++VVVF+PP F Y + EALIKRI+A+ GD VE+K G ++ING+EQ E + ED E Sbjct: 78 GSILDELGAWWNSDEGRDDVKTYFVSLGIALLLRFTIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIKPFYREEVVVFNPPQGFRDVMVGKYGQDSARAKEALIKRIVAIEGDEVEVKQGKLYINGDEQDEPFTAEDAE 216
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: K0S0N9_THAOC (Mitochondrial inner membrane protease subunit n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S0N9_THAOC) HSP 1 Score: 132 bits (333), Expect = 1.970e-31 Identity = 68/127 (53.54%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 331 VKRWW-EREGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIKDGLVFINGEEQFESYQFED 699 V+ W+ EGKED +TY SL IAL++R + IEPRYIPSLSM+PTFE+GDQ AV+K++K R + +VVVF+PP +F + T+R EALIKRI+A GD VE+ G +F+NG+EQ E + ED Sbjct: 101 VQEWFASEEGKEDVRTYTTSLGIALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIRPLNRNEVVVFNPPTSFKEIVGDTSRKAKEALIKRIVATEGDKVEVMGGKLFVNGKEQDEPFTAED 227
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S3HGB1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGB1_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.270e-31 Identity = 63/114 (55.26%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 352 EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYD-YTTRTGNEALIKRIIAVGGDTVEIKDG-LVFINGEEQFESY 687 E +ED KT+ SL IAL R + IEPR+IPSLSM+PTF++GDQ VDK+S+ +R +Q++DVVVF+PPPAF + R+ EALIKRI+A+ GDT+++K+G ++INGE Q E + Sbjct: 2 ESQEDIKTFLTSLTIALTFRALFIEPRFIPSLSMYPTFDVGDQLTVDKVSRNWRDFQRRDVVVFYPPPAFNEAINARSDGEALIKRIVALDGDTMQVKNGGTLYINGEAQAEDF 115
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A6V1AJW1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6V1AJW1_9STRA) HSP 1 Score: 131 bits (330), Expect = 5.180e-31 Identity = 69/130 (53.08%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 331 VKRWWER-EGKEDFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDY---TTRTGNEALIKRIIAVGGDTVEIK-DGLVFINGEEQFESYQFEDNE 705 ++ W+ EGKED KTY SL++AL++R + IEPRYIPSLSM+PTFE+GDQ AV+K++K R + + +VVVF+PP F + ++R EALIKRI+AV GDTVE+K G +F+NG +Q E + ED E Sbjct: 100 IQEWFASDEGKEDVKTYTVSLSVALLLRLLIIEPRYIPSLSMYPTFEVGDQLAVEKVTKRIRPFNRNEVVVFNPPERFRELVGESSRKSKEALIKRIVAVEGDTVEVKMGGKLFVNGVQQDEPFTAEDAE 229
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Match: A0A7S2C5D0_9STRA (Mitochondrial inner membrane protease subunit (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C5D0_9STRA) HSP 1 Score: 127 bits (318), Expect = 5.250e-31 Identity = 65/124 (52.42%), Postives = 91/124 (73.39%), Query Frame = 1 Query: 325 GGVKRWWEREGKE-DFKTYAGSLAIALVIRTVAIEPRYIPSLSMFPTFEIGDQFAVDKLSKYYRSYQKKDVVVFHPPPAFYDYTTRTG------NEALIKRIIAVGGDTVEIKDGLVFINGEEQ 675 GG++ + E + + K+Y SL++AL++R + IEPRYIPSLSM+PTF++GDQ AV+K+SK +R Q+KDVVVF+PP AF D T T +EALIKR+IAV GD VE++ G++ +NGE Q Sbjct: 18 GGIQAFLSNEETQAEIKSYVVSLSVALLLRFLVIEPRYIPSLSMYPTFDVGDQLAVEKVSKLFRPQQRKDVVVFNPPQAFKDITQGTAGGERMKDEALIKRVIAVEGDVVEMRKGVLLVNGEAQ 141 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig768.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig768.3.2 >prot_C-tenellus_contig768.3.2 ID=prot_C-tenellus_contig768.3.2|Name=mRNA_C-tenellus_contig768.3.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=220bp MRRMAGFNHPFVLSLLSIACLQSALAFLPRNGGRILSLGQTRGQGLKRGGback to top mRNA from alignment at C-tenellus_contig768:4978..7800- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig768.3.2 ID=mRNA_C-tenellus_contig768.3.2|Name=mRNA_C-tenellus_contig768.3.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2823bp|location=Sequence derived from alignment at C-tenellus_contig768:4978..7800- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig768:4978..7800- >mRNA_C-tenellus_contig768.3.2 ID=mRNA_C-tenellus_contig768.3.2|Name=mRNA_C-tenellus_contig768.3.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=660bp|location=Sequence derived from alignment at C-tenellus_contig768:4978..7800- (Choristocarpus tenellus KU2346)back to top |