prot_C-tenellus_contig7674.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7674.1.1
Unique Nameprot_C-tenellus_contig7674.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length172
Homology
[Close]
BLAST of mRNA_C-tenellus_contig7674.1.1 vs. uniprot
Match: D7G220_ECTSI (FYR N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G220_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.440e-21
Identity = 64/170 (37.65%), Postives = 89/170 (52.35%), Query Frame = 0 
Query:    1 MKKFLATRKFPVQVGVVRVHSLGKIKPRGGYHTRERLVPIGFRASRLEHSRRHDSVVHCFLEIIEEPVIPAQELTAQTPGGQGGGATGKLGGEGVGAGTSLLDNGDGFTDLGKAKGDLVGGGAGEGGNVQK-VAMYKVSVDCGTEPLEWFRGSTPGKAWRAALRAMGYEV 169
            +K+F A+RKFP  VGVV+VHSLGK+KP  G++   RL P+GFRASR E S   +S+VHC +E++E   +P  E      GG                            D         GG AG+GG   K VA+++V++         F+  + GKAWRAAL+++G EV
Sbjct:  440 LKRFAASRKFPTNVGVVQVHSLGKVKPEPGFYALGRLAPVGFRASRTERSPDDESLVHCVMEVVE---VPDPEEAGTADGGSADAPAXXXXXXXXXXXXXXXXXXXXXXDDAGRPPPEAGGEAGDGGGTAKTVAVFRVTLSGLKGKRGTFQDVSAGKAWRAALQSIGAEV 606
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7674.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G220_ECTSI1.440e-2137.65FYR N-terminal domain-containing protein n=2 Tax=E... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003888FY-rich, N-terminalPFAMPF05964FYRNcoord: 17..47
e-value: 2.4E-6
score: 27.3
IPR003888FY-rich, N-terminalPROSITEPS51542FYRNcoord: 9..66
score: 16.482
NoneNo IPR availableGENE3D3.30.160.360coord: 10..169
e-value: 3.4E-9
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7674contigC-tenellus_contig7674:1127..5681 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7674.1.1mRNA_C-tenellus_contig7674.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7674 1103..5681 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7674.1.1 ID=prot_C-tenellus_contig7674.1.1|Name=mRNA_C-tenellus_contig7674.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=172bp
MKKFLATRKFPVQVGVVRVHSLGKIKPRGGYHTRERLVPIGFRASRLEHS
RRHDSVVHCFLEIIEEPVIPAQELTAQTPGGQGGGATGKLGGEGVGAGTS
LLDNGDGFTDLGKAKGDLVGGGAGEGGNVQKVAMYKVSVDCGTEPLEWFR
GSTPGKAWRAALRAMGYEVGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003888FYrich_N