prot_C-tenellus_contig762.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig762.3.1
Unique Nameprot_C-tenellus_contig762.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length227
Homology
[Close]
BLAST of mRNA_C-tenellus_contig762.3.1 vs. uniprot
Match: D7FYW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYW2_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 7.270e-40
Identity = 83/184 (45.11%), Postives = 111/184 (60.33%), Query Frame = 0 
Query:   49 STLTMATGFGKVDDQMKPRGAGRGTKAFERQMRSFDGLKKAGAEIVDVYAHHPGGDNKFYFAGKVARSHGISVDQSLQWHRELIVDHVRMLESSLQ---LPLRIFTAPGNTEVSVAKNELDLCRALTEGS---VDLSGIRGPEVGFMPETYERGQPYYYCRKDEAGKSLGPPVQPKIEGFPGVI 226
            S + M  GFG  + + K  G GRG  A++RQ++S+ GL +AGAE  DVY H  G D+KF F GK A S GI+V Q+LQ+ R LI+ HV +LE   +    P+RIFTAP N+E+ VA+N  DL R L  G    V +  +   EVG  PE YE G+PY+Y RK + GK   PP +  IE    ++
Sbjct:   52 SRVMMMGGFGGPEKKKKVVGVGRGQDAYQRQVKSYHGLTEAGAEGADVYVHREG-DDKFIFMGKAAWSSGITVQQALQFQRGLILGHVELLEPMWKDKPAPMRIFTAPINSEIEVARNIHDLVRVLGPGKGKDVKVDKLTPQEVGLRPELYELGEPYFYVRKLDDGKCPAPPSEVMIETMDNLV 234
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig762.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYW2_ECTSI7.270e-4045.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 21..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 30..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig762contigC-tenellus_contig762:5041..5972 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig762.3.1mRNA_C-tenellus_contig762.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig762 3948..6003 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig762.3.1 ID=prot_C-tenellus_contig762.3.1|Name=mRNA_C-tenellus_contig762.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=227bp
MVSKTWVSLCVSEGRMGRSRGLLILFCCLVQGQAFFNPLCCSGVVRYEST
LTMATGFGKVDDQMKPRGAGRGTKAFERQMRSFDGLKKAGAEIVDVYAHH
PGGDNKFYFAGKVARSHGISVDQSLQWHRELIVDHVRMLESSLQLPLRIF
TAPGNTEVSVAKNELDLCRALTEGSVDLSGIRGPEVGFMPETYERGQPYY
YCRKDEAGKSLGPPVQPKIEGFPGVI*
back to top