mRNA_C-tenellus_contig759.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI) HSP 1 Score: 404 bits (1037), Expect = 1.150e-135 Identity = 201/223 (90.13%), Postives = 212/223 (95.07%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYVVCPS+KRFLLLFTF KKN+K KKIMVFFS CNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFC+Q+ GVLLCTDVAARGLDIP+VDWIIQ+DPPDQTAEYIHRVGRTARGQS KGRALLFLLPEE+GFLRYL+ AKAKLNEYEFPVKK AN QSQL RLIEKNYYLNKSAREAYRSYLLAYSSHSLK+IY+VHELDLQAVARAFGFTVPPRV Sbjct: 372 QGYVVCPSDKRFLLLFTFLKKNRK---KKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRV 591
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA) HSP 1 Score: 384 bits (986), Expect = 2.390e-127 Identity = 187/223 (83.86%), Postives = 204/223 (91.48%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYVVCPSEKRFLLLFTF KKN+ KK+MVFFS CNSV +H+ELLNYIDIPVM+IHGRQKQQKRTT+FFQFCRQE G+LLCTDVAARGLDIP+VDWIIQYDPPDQTAEYIHRVGRTARG + GRALLFLLP+E+GFLRYL+AAK LNEYEFP K AN QSQL RL+EKNYYLNKSAR+AYRSYLLAY+SHSLK +YNVHELDLQAVA+AFGFTVPPRV Sbjct: 430 QGYVVCPSEKRFLLLFTFLKKNRN---KKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYLRAAKVTLNEYEFPAHKVANVQSQLSRLVEKNYYLNKSARDAYRSYLLAYASHSLKTLYNVHELDLQAVAKAFGFTVPPRV 649
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A7S2RSI8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSI8_9STRA) HSP 1 Score: 361 bits (926), Expect = 4.990e-124 Identity = 176/223 (78.92%), Postives = 199/223 (89.24%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QG+VVCPS++RFLLLFTF K+N+K KKIMVFFS CNSVKFHSELLNYIDIPVMDIHG+QKQQKRTT+FFQFCRQ++G+LLCTDVAARGLDIPSVDWIIQYDPPD EYIHRVGRTARG + GRALLFLLPEE+GFL+YL++AK LNEYEF K AN QSQL RLIE NYYLNKS REA+RSYL++Y+SHSLK+I+NVHELDL+ V AFGF+VPPRV Sbjct: 7 QGFVVCPSQRRFLLLFTFLKRNRK---KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGKQKQQKRTTTFFQFCRQKEGILLCTDVAARGLDIPSVDWIIQYDPPDDPREYIHRVGRTARGLTGAGRALLFLLPEEVGFLKYLRSAKVSLNEYEFQSNKIANVQSQLTRLIENNYYLNKSGREAFRSYLMSYASHSLKDIFNVHELDLEGVGVAFGFSVPPRV 226
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA) HSP 1 Score: 372 bits (956), Expect = 2.270e-122 Identity = 181/223 (81.17%), Postives = 204/223 (91.48%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYVVCPS+KRFLLLFTF K+NK+ +KIMVFFS CNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFCRQ+KG+LLCTDVAARGLDIP+VDWIIQYDPPD EYIHRVGRTARG + KGRALLFL EE+GFL+YL+AAK LNEYEFP KK AN Q+QL +L+EKNYYLNKSAR+AYRSYLLAY+SHS K+I+NVHELDLQAVARAFGF+VPPRV Sbjct: 470 QGYVVCPSDKRFLLLFTFLKRNKQ---RKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRV 689
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: B8BY61_THAPS (RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY61_THAPS) HSP 1 Score: 358 bits (920), Expect = 1.250e-119 Identity = 179/223 (80.27%), Postives = 194/223 (87.00%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYV PS++RFLLLFTF KKNK KKIMVFFS CNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFC+Q G LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG+ KGRALLFL PEE GFLRYLKAAK LNEYEFP+ K AN QSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL++I++VH LDL AV RAFGFT PPRV Sbjct: 246 QGYVTVPSDQRFLLLFTFLKKNKN---KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRV 465
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: K0T9N9_THAOC (RNA helicase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T9N9_THAOC) HSP 1 Score: 362 bits (928), Expect = 1.810e-119 Identity = 180/223 (80.72%), Postives = 194/223 (87.00%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYV PS++RFLLLFTF KKNK KKIMVFFS CNSVKFH+ELLNYIDIP MDIHGRQKQQKRTT+FFQFC+Q KG LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG GRALLFL PEE GFLRYLKAAK LNEYEFP+KK AN QSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL++I+NVHELDL AV RAFGFT PPRV Sbjct: 354 QGYVTVPSDQRFLLLFTFLKKNKN---KKIMVFFSSCNSVKFHAELLNYIDIPCMDIHGRQKQQKRTTTFFQFCKQSKGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDEGTGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMKKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLSAVGRAFGFTAPPRV 573
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A7S2YMR7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YMR7_9STRA) HSP 1 Score: 352 bits (903), Expect = 4.720e-119 Identity = 176/223 (78.92%), Postives = 189/223 (84.75%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QG+V CPS KRFLLLFTF KKNK KKIMVFFS CNSVKFH+ELLNYIDIPVMDIHGRQKQ KRTT+FFQFC+ E G L CTDVAARGLDIP VDWIIQ+DPPD EYIHRVGRTARG GRALLFL PE+ GFL+YLKAAK LNEYEFP K AN QSQL +LIE NYYLN SAR+AYRSYLLAY+SHS ++I+NVHELDLQAV RAFGFTVPPRV Sbjct: 110 QGFVTCPSNKRFLLLFTFLKKNKN---KKIMVFFSSCNSVKFHAELLNYIDIPVMDIHGRQKQVKRTTTFFQFCKNEVGTLCCTDVAARGLDIPKVDWIIQFDPPDDPREYIHRVGRTARGAKGSGRALLFLTPEKTGFLKYLKAAKVTLNEYEFPDNKVANVQSQLQKLIESNYYLNCSARDAYRSYLLAYASHSHRDIFNVHELDLQAVGRAFGFTVPPRV 329
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA) HSP 1 Score: 357 bits (917), Expect = 9.510e-119 Identity = 171/223 (76.68%), Postives = 197/223 (88.34%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYVVCPS RFLLLFTF KKN+K +K+MVFFS CN+VK+H+ELLNYID+PVMDIHGRQKQQ+RT++FFQFC+ + G+LLCTDVAARGLDIP+VDWI+QYDPPDQ AEYIHRVGRTARG S GRALLFL PEE+GFLRYL+ AK LNEYEFP K AN Q+QL RL+E+NYYLNKSAREAYRSYLLAY+SH+ K+I+NVH LDL A A++FGFTVPPRV Sbjct: 281 QGYVVCPSANRFLLLFTFLKKNRK---RKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYLRKAKVALNEYEFPTSKVANVQNQLERLVERNYYLNKSAREAYRSYLLAYASHADKDIFNVHNLDLVATAKSFGFTVPPRV 500
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA) HSP 1 Score: 359 bits (921), Expect = 1.010e-118 Identity = 179/223 (80.27%), Postives = 193/223 (86.55%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QGYV PS++RFLLLFTF KKNK KKIMVFFS CNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFC+Q G LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG GRALLFL PEE GFLRYLK AK LNEYEFP+KK +N QSQL RLIEKNYYLN +AR+AYRSYLLAY+SHSL++I+NVHELDL AV RAFGFT PPRV Sbjct: 328 QGYVTVPSDQRFLLLFTFLKKNKN---KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYLKVAKVTLNEYEFPMKKLSNVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLAAVGRAFGFTAPPRV 547
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA) HSP 1 Score: 354 bits (909), Expect = 3.360e-117 Identity = 175/223 (78.48%), Postives = 192/223 (86.10%), Query Frame = 1 Query: 1 QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQEKGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSSKGRALLFLLPEEIGFLRYLKAAKAKLNEYEFPVKKAANAQSQLGRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYNVHELDLQAVARAFGFTVPPRV 669 QG+V CPS+KRFLLLFTF KKN+K KKIMVFFS CNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQF + + G LLCTDVAARGLDIP VDWIIQ+DPPD EYIHRVGRTARG + GRALLFL PEE GFL+YL+AAK LNEYEFPV K AN QSQL LIEKNYYLN+SAR+AYRSYLLAY+SHS K+I+NVH++DLQ A AFGFT PPRV Sbjct: 308 QGFVTCPSDKRFLLLFTFLKKNRK---KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYLQAAKVTLNEYEFPVSKVANVQSQLQNLIEKNYYLNRSARDAYRSYLLAYASHSHKDIFNVHQMDLQGAATAFGFTTPPRV 527 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig759.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig759.1.1 >prot_C-tenellus_contig759.1.1 ID=prot_C-tenellus_contig759.1.1|Name=mRNA_C-tenellus_contig759.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=223bp QGYVVCPSEKRFLLLFTFFKKNKKNKIKKIMVFFSPCNSVKFHSELLNYIback to top mRNA from alignment at C-tenellus_contig759:258..3935+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig759.1.1 ID=mRNA_C-tenellus_contig759.1.1|Name=mRNA_C-tenellus_contig759.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3678bp|location=Sequence derived from alignment at C-tenellus_contig759:258..3935+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig759:258..3935+ >mRNA_C-tenellus_contig759.1.1 ID=mRNA_C-tenellus_contig759.1.1|Name=mRNA_C-tenellus_contig759.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=669bp|location=Sequence derived from alignment at C-tenellus_contig759:258..3935+ (Choristocarpus tenellus KU2346)back to top |