mRNA_C-tenellus_contig730.5.2 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: D8LMF6_ECTSI (cGMP-dependent protein kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMF6_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.200e-54 Identity = 95/144 (65.97%), Postives = 110/144 (76.39%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGVQRGESFNQDLSHNCHLKIQKIMQTEGGLPAEGKDYTGDQGIWERF 434 VRHQ HS AVDFWGLGVLIYE+++G SPF ADSEM IYNKISSHR G L P+SF+PA+ D +DRLLHHDP ERLG++ D+ I THQWFAGFDWGGVQ GE +NQ+L H K QK+ EG LP GK Y+ DQ IW+RF Sbjct: 943 VRHQEHSKAVDFWGLGVLIYELSYGTSPFQADSEMTIYNKISSHRAGMLEIPTSFAPAMGDFIDRLLHHDPQERLGSKADDITAIKTHQWFAGFDWGGVQAGEYYNQELQQLAHAKAQKLAGQEGELPDGGKGYSDDQSIWQRF 1086
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: A0A7S2V8F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8F4_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.310e-27 Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGARE--GDVKTIMTHQWFAGFDWGGVQRGESFNQDLSHNCHLKIQKIMQT-EGGLPAEGKDYTGDQGIWERF 434 VR +G + DFW LG+ IYE+ G SPF+AD E+++Y+ I+++R G L YP FS L LL+ LLH DP +RLG + G V I H++F G DW + G N LS + K + T + +P G+ +TGD I++ F Sbjct: 174 VRQEGSGVEQDFWALGIFIYEVLFGNSPFSADKEIDVYSNITNYRAGSLEYPEDFSDHLVSLLNGLLHPDPAQRLGCPDLDGGVAAIKQHRYFHGLDWEQLSSGGLLNTALSTIAQQLVNKAVHTAQTAIPTVGRIFTGDDSIFDGF 320
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: A0A482RSU3_9ARCH (Protein kinase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSU3_9ARCH) HSP 1 Score: 105 bits (262), Expect = 5.320e-23 Identity = 48/102 (47.06%), Postives = 65/102 (63.73%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGVQRG 308 + ++GH+ AVD+W LGVLI+EM HG PF D M +Y KI G++ YP SFS AL DL+ + L +P +RLG +G + IM H+WF FDW G+ G Sbjct: 13 ILNKGHNQAVDYWALGVLIFEMMHGWPPFYHDQPMRVYEKIIM---GKVAYPESFSKALEDLVSKFLVTNPSKRLGNMKGGMNDIMKHKWFGAFDWAGLAAG 111
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: B8C3C3_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C3C3_THAPS) HSP 1 Score: 101 bits (252), Expect = 4.710e-20 Identity = 45/99 (45.45%), Postives = 64/99 (64.65%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGV 299 + ++G+ AVD+WGLGVLIYEM+ G++PF A+S M Y K+ S G + P+ FS A L+ +LLH +RLG G T+M H W++GFDW G+ Sbjct: 176 ILNEGYDWAVDYWGLGVLIYEMSAGVAPFFAESPMETYEKVLS---GHVHIPAHFSRACASLIKKLLHTSQSKRLGRTVGGATTVMCHPWYSGFDWDGL 271
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: A0A7S2PHB5_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PHB5_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.460e-19 Identity = 43/97 (44.33%), Postives = 60/97 (61.86%), Query Frame = 3 Query: 9 HQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGV 299 ++G+ VD+WGLGVLIYEMT G++PF A+S M Y K S G + P+ FS + +L+ +LLH +RLG G T+M H WF+ FDW + Sbjct: 1 NEGYDWGVDYWGLGVLIYEMTAGVAPFYAESPMETYEKALS---GHVHMPTHFSRSAANLIKKLLHTSQAKRLGRTVGGATTVMCHPWFSNFDWDAL 94
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: X0RYE1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0RYE1_9ZZZZ) HSP 1 Score: 100 bits (248), Expect = 2.230e-19 Identity = 47/96 (48.96%), Postives = 60/96 (62.50%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDW 290 + ++GH AVD+W LGVLIYEMT G PF AD M +Y KI S G + PS FS L DL+ +LL +RLG +G +M H+WF+GFDW Sbjct: 173 ILNEGHDWAVDYWALGVLIYEMTAGSPPFYADDPMEVYEKILS---GHVSIPSHFSRGLSDLVKKLLRTYQSKRLGRTKGGTAAVMKHKWFSGFDW 265
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: A0A7S0I3B5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I3B5_9EUKA) HSP 1 Score: 103 bits (257), Expect = 2.980e-19 Identity = 60/152 (39.47%), Postives = 83/152 (54.61%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFA-----ADSEMNIYNKISSHRGGELVYPSSFSPA--LCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGVQRGESFNQDLSHNCHLKIQKIMQTEGG-LPAEGKDYTGDQGIWERF 434 V QGHS+ VDFW LGVLIYEM G P+ ADSE+ IYN+ISSH G + P FS + L LL+ LL +P +RLG R + I T++WF+GF+W + GE + ++ C + +T +P Y G+ +E F Sbjct: 922 VSGQGHSLPVDFWALGVLIYEMLTGSGPWITGDPNADSEVAIYNRISSHAAGGMPLPKDFSLSDDLAQLLNDLLAPNPVKRLGCRGAGAEEIKTYKWFSGFNWDECEAGE-MSAPHANLCTEALAAAEKTASKCMPEAAGSYKGEAAWYEGF 1072
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: K0S242_THAOC (AGC-kinase C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S242_THAOC) HSP 1 Score: 99.8 bits (247), Expect = 2.410e-18 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGV 299 V ++GH AVD+W LGVLIYEMT+G+ PF AD M +Y KI S G + PS FS L DL+ +LL +RLG +G ++M +WF+GFDW + Sbjct: 426 VLNEGHDWAVDYWALGVLIYEMTNGVPPFYADEPMGVYEKILS---GIVTVPSHFSRGLGDLVKKLLKTFQSKRLGRTKGGAGSVMKQKWFSGFDWNSL 521
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: B8C5K5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5K5_THAPS) HSP 1 Score: 96.7 bits (239), Expect = 2.990e-18 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGV 299 + ++GH AVD+W LGVLIYEMT G PF A+ M +Y KI S G + PS FS L +L+ +LL +RLG +G ++M +WF+GFDW + Sbjct: 187 ILNEGHDWAVDYWALGVLIYEMTAGTPPFYAEDPMEVYEKILS---GHVTIPSHFSRGLAELVKKLLKTFQSKRLGRTKGGASSVMKQKWFSGFDWNSL 282
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Match: A0A7S2LD17_9STRA (cGMP-dependent protein kinase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LD17_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 4.720e-18 Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 3 Query: 3 VRHQGHSIAVDFWGLGVLIYEMTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPGERLGAREGDVKTIMTHQWFAGFDWGGV 299 + ++GH + VD+W LGVL+YEMT G PF AD M +Y KI S G + P+ FS L DL+ +LL +RLG +G +M H+WF+GFDW + Sbjct: 578 ILNEGHDMGVDYWALGVLVYEMTAGSPPFYADDPMEVYEKILS---GHIFIPAYFSRGLSDLVKKLLKTYQSKRLGKTKGGTSAVMKHKWFSGFDWDAL 673 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig730.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig730.5.2 >prot_C-tenellus_contig730.5.2 ID=prot_C-tenellus_contig730.5.2|Name=mRNA_C-tenellus_contig730.5.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=124bp MTHGISPFAADSEMNIYNKISSHRGGELVYPSSFSPALCDLLDRLLHHDPback to top mRNA from alignment at C-tenellus_contig730:12864..16980- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig730.5.2 ID=mRNA_C-tenellus_contig730.5.2|Name=mRNA_C-tenellus_contig730.5.2|organism=Choristocarpus tenellus KU2346|type=mRNA|length=4117bp|location=Sequence derived from alignment at C-tenellus_contig730:12864..16980- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig730:12864..16980- >mRNA_C-tenellus_contig730.5.2 ID=mRNA_C-tenellus_contig730.5.2|Name=mRNA_C-tenellus_contig730.5.2|organism=Choristocarpus tenellus KU2346|type=CDS|length=372bp|location=Sequence derived from alignment at C-tenellus_contig730:12864..16980- (Choristocarpus tenellus KU2346)back to top |