prot_C-tenellus_contig6973.6.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6973.6.1
Unique Nameprot_C-tenellus_contig6973.6.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length376
Homology
BLAST of mRNA_C-tenellus_contig6973.6.1 vs. uniprot
Match: D7FPB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB5_ECTSI)

HSP 1 Score: 236 bits (602), Expect = 3.040e-67
Identity = 172/442 (38.91%), Postives = 222/442 (50.23%), Query Frame = 0
Query:    1 QVFNSAIIEALPDALARVDGQLTEGRRPMTLNWTQFIRLMRLCTEGSLSG--------IASLFEETQDLKLDFLTKKRRRPPPLATAHTRTQPC-GKTITATTSPATA------------PTGPT----------------GTLSPHDSSKDEVAVVPGTPDCRTKTAPTCAQERGDRSGVGASRRWYGGKGQGQRVKSVVG-----------------------------MESLMRPLDKHEVSRSYHESLHRRRQRQKEALDRAPSPDTEPKHPYKACGLCQLFFPADSLSATVSFKVLGEFLNMAGAPSGRFERKATQLCAYHRLHICVFCSQFFDPDYPGGVVHPLGHEYRRNVGTTRGGHPGTGEQGGGRARVRTAASVTGSGYTGKESSTNERSSGGLSVLQANGIIPFFDDRFSGLYSVEDALLNTDSAAGRARS 376
            Q+ +S ++EALPDALAR + QL +  RP+ L+WT+F+ +M LC E   SG        +A LFEE  D KL+FLT++R R PP  T +   Q   GK     ++PA              P GPT                G+ S  D+S  E     GT D     A      RG R   G         G G  + S  G                             ++SL+RP  +HEV R Y E++ +RR+RQ+EAL RAP PD EP   YK CGLCQ  FP +SL +TVS KVL  FL +AGAPS RF+RKA+ L A HRL +CVFC QFFDPD+PGGV+ P      RN   TRGG         GR R+    S + S ++  ESS    S    +  +ANG++PFFDDRF   +S  +A   + + AGRA S
Sbjct:  293 QLLSSGVVEALPDALARAEAQLPQAHRPLGLDWTRFLGVMGLCLESVYSGTGLLAASAVARLFEEKTDDKLEFLTRRRNRLPPRETVNEGAQQHKGKYRGFESAPAVVGADGSIGVAEGTPRGPTKGAKAGSGTTGSSVAAGSYSAEDTSMPEAGSSIGTRDDTLFEAGGSGASRGSRRRDGTPATTTSANGHGGALVSRPGGLVFGGXXXXXXXXXXXYRXXXXGGGAAALKSLLRPQARHEVVRGYGEAVCKRRERQREALKRAPEPDVEPTRAYKPCGLCQAPFPVESLGSTVSLKVLATFLAIAGAPSERFDRKASGLSALHRLPLCVFCGQFFDPDFPGGVIPPT-----RNAALTRGG---------GRRRLLGDVSFSSSTFS-LESSLFPSSPSLRATAEANGLVPFFDDRFPERWS--EAPPPSSAPAGRASS 717          
BLAST of mRNA_C-tenellus_contig6973.6.1 vs. uniprot
Match: A0A6H5JM50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM50_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 7.120e-60
Identity = 170/454 (37.44%), Postives = 221/454 (48.68%), Query Frame = 0
Query:    1 QVFNSAIIEALPDALARVDGQLTEGRRPMTLNWTQFIRLMRLCTEG--------SLSGIASLFEETQDLKLDFLTKKRRRPPPLATAHTRT-QPCGKTITATTSPATAPTGPTGTLSPHDSSKDEVAVVPGTPDCRTKTAPT----------------------------------------CAQERGDRSGVGASRRWYGGKGQGQRVKS------VVG-----------------------MESLMRPLDKHEVSRSYHESLHRRRQRQKEALDRAPSPDTEPKHPYKACGLCQLFFPADSLSATVSFKVLGEFLNMAGAPSGRFERKATQLCAYHRLHICVFCSQFFDPDYPGGVVHPLGHEYRRNVGTTRGGHPGTGEQGGGRARVRTAASVTGSGYTGKESSTNERSSGGLSVLQANGIIPFFDDRFSGLYSVEDALLNTDSAAGRARS 376
            Q+ +S +IEALPDALAR + +L + +RP+ L+W +F+ +M LC E         + S +A LFEE  D KL+FLT++R R PP  T      Q  GK     ++PA    G  G++           V  GTP   TK A                                              RG R   G         G G  V S      VVG                       ++SL+RP  +HEV R Y E++ +RR+RQ+EAL RA  PD EP   YK CGLCQ  FP +SL +TVS KVL  FL MAGAPS RF+RKA+ L A HRL +CVFC QFFDPD+PGGV+ P      RN   TRGG         GR R++  AS++ S  +  ESS    S    + ++ANG++PFFDDRF   +S  +A   + + AGRA S
Sbjct:  896 QLLSSGVIEALPDALARAEARLPQAQRPLGLDWNRFLGVMGLCLESVYGGTGLLAASAVARLFEEKTDDKLEFLTRRRNRLPPRDTVKVGARQQKGKYRGFESAPAVV--GADGSI----------GVTEGTPGGATKGAKAGSGTXXXXXXXXSYSAEDXXXXXXXXXXXXXXXXXXXXXXXGASRGSRRREGTPATTTSANGHGGAVASRPGGPVVVGIGGGYGDADWGNRSKRRGGGAAALKSLLRPQARHEVVRGYGEAVCKRRERQREALKRALEPDVEPTRAYKPCGLCQAPFPVESLGSTVSLKVLATFLAMAGAPSERFDRKASGLSALHRLPLCVFCGQFFDPDFPGGVIPPT-----RNATLTRGG---------GRRRLKGDASLSSSSSS-LESSLLLFSPSLRATVEANGLVPFFDDRFPERWS--EAPPPSSAPAGRASS 1320          
BLAST of mRNA_C-tenellus_contig6973.6.1 vs. uniprot
Match: A0A7S4ECL3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECL3_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 1.030e-5
Identity = 31/87 (35.63%), Postives = 42/87 (48.28%), Query Frame = 0
Query:  197 LDRAPSPDTEPKHPYKACGLCQLFFPADSLSATVSFKVLGEFLNMAGAPSGRFERKATQLCAY--HRLHICVFCSQFFDPDYPGGVV 281
            +D    P    K  Y ACGLC   FP+DS + +    V+   L   G      + + ++  A   +RL ICVFCSQF DPD   G+ 
Sbjct:  913 IDEHRRPRRREKRLYNACGLCLQLFPSDSYTISAPHNVIIAQLKNFGLSEDELKERGSESLALWANRLPICVFCSQFLDPDEDSGIA 999          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6973.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FPB5_ECTSI3.040e-6738.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JM50_9PHAE7.120e-6037.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4ECL3_9STRA1.030e-535.63Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 315..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 317..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6973contigC-tenellus_contig6973:4534..5889 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6973.6.1mRNA_C-tenellus_contig6973.6.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6973 4534..5889 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6973.6.1 ID=prot_C-tenellus_contig6973.6.1|Name=mRNA_C-tenellus_contig6973.6.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=376bp
QVFNSAIIEALPDALARVDGQLTEGRRPMTLNWTQFIRLMRLCTEGSLSG
IASLFEETQDLKLDFLTKKRRRPPPLATAHTRTQPCGKTITATTSPATAP
TGPTGTLSPHDSSKDEVAVVPGTPDCRTKTAPTCAQERGDRSGVGASRRW
YGGKGQGQRVKSVVGMESLMRPLDKHEVSRSYHESLHRRRQRQKEALDRA
PSPDTEPKHPYKACGLCQLFFPADSLSATVSFKVLGEFLNMAGAPSGRFE
RKATQLCAYHRLHICVFCSQFFDPDYPGGVVHPLGHEYRRNVGTTRGGHP
GTGEQGGGRARVRTAASVTGSGYTGKESSTNERSSGGLSVLQANGIIPFF
DDRFSGLYSVEDALLNTDSAAGRARS
back to top