prot_C-tenellus_contig6693.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6693.2.1
Unique Nameprot_C-tenellus_contig6693.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length206
Homology
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BLAST of mRNA_C-tenellus_contig6693.2.1 vs. uniprot
Match: A0A835YNI0_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNI0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.360e-5
Identity = 31/64 (48.44%), Postives = 36/64 (56.25%), Query Frame = 0 
Query:   10 TPLMFATQYTGLMKLQGQPWAYFGAVVRVLLDGGASVHLTDKKGRTALMFAAELGHVEVTGWLI 73
            TP++FA      M + G           VLLDGGA V   DK GRTALMFAAELGH E+  W +
Sbjct:   74 TPMLFACIEGASMVVNGG----------VLLDGGADVSARDKSGRTALMFAAELGHPELVQWCL 127
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6693.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YNI0_9STRA1.360e-548.44Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 53..68
score: 43.74
coord: 101..115
score: 41.32
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 7..48
e-value: 2700.0
score: 1.8
coord: 52..81
e-value: 0.04
score: 23.1
coord: 151..181
e-value: 52.0
score: 12.7
coord: 118..147
e-value: 0.99
score: 18.4
coord: 85..114
e-value: 0.29
score: 20.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 52..84
score: 11.541
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 118..150
score: 10.366
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 85..117
score: 11.781
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..186
e-value: 2.1E-42
score: 146.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 9..184
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 32..116
e-value: 3.1E-12
score: 46.9
coord: 123..176
e-value: 1.1E-6
score: 29.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 7..174
score: 40.717
NoneNo IPR availablePANTHERPTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDcoord: 34..128
coord: 72..174

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6693contigC-tenellus_contig6693:903..4069 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6693.2.1mRNA_C-tenellus_contig6693.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6693 751..4489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6693.2.1 ID=prot_C-tenellus_contig6693.2.1|Name=mRNA_C-tenellus_contig6693.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=206bp
MFDSENNAVTPLMFATQYTGLMKLQGQPWAYFGAVVRVLLDGGASVHLTD
KKGRTALMFAAELGHVEVTGWLIASGSDVEAADINGTRPLMYASIGAHMQ
VVMALLEAGADPNTTNSKGSGSLHFAASGGSLPIMNLLLKKDCDVDAANV
DGDNALSLAISAGKVGAVGYLIEKANASLECIDKVCWGRKGYRTCVCLLD
AHNQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom