mRNA_C-tenellus_contig668.6.3 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A6H5KYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR0_9PHAE) HSP 1 Score: 277 bits (709), Expect = 4.760e-80 Identity = 147/346 (42.49%), Postives = 206/346 (59.54%), Query Frame = 2 Query: 368 DEKGQRIQTWHVFREDD------KGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGS-LPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGK-------NIEDGETKMKTGGIK---------------FIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPF------MKLVLVEEAVVTMSVLEFGGEFVD 1300 DE +R T+H F D +G P P+ DP FTW ADG+GS + GD G++ + ELS++A+F R WS+++PN+ GPEGWL +T LLPL YF+HS GS+ Y++ G+ + GRG +H+EANYG + FP GWVWA+G +TQGL G F +G+ ++++G + + G K F++TGG+F+IGPITT SFV+ +RS H W+FR TDLD I + S +HRL + A S+ RV+KA ++A EGSFG Y+P P+G++N PG ES+ ATA F LY + LVL EE ++ LEFGGE+ D Sbjct: 531 DEATERTHTFHAFPPADTVTILCRGEPVN--GVPNLRDDPSFTWEADGIGSFAVDGDTGRLSFQLPELSVAASFRYRQAWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGES-FPTGWVWAQGCSATQGLCGNVFRDGELTNPDGGSVQEGSARRRAAGGKADGLAGPKRDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHKWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPDGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQD 873
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: D8LQ64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ64_ECTSI) HSP 1 Score: 273 bits (698), Expect = 8.110e-80 Identity = 147/346 (42.49%), Postives = 205/346 (59.25%), Query Frame = 2 Query: 368 DEKGQRIQTWHVFREDD------KGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGS-LPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGK--NIEDGETKMKTGGIK--------------------FIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPF------MKLVLVEEAVVTMSVLEFGGEFVD 1300 DE +R T+H F D +G P P+ DP FTW ADG+GS + GD G++ + ELS++A+F R PWS+++PN+ GPEGWL +T LLPL YF+ S GS+ Y++ G+ + GRG +H+EANYG + FP GWVWA+G +T+GL G F +G+ N + G + + G + F++TGG+F+IGPITT SFV+ +RS H+W+FR TDLD I + S +HRL + A S+ RV+KA ++A EGSFG Y+P PEG++N PG ES+ ATA F LY + LVL EE ++ LEFGGE+ D Sbjct: 361 DEATERTHTFHAFPPADTVTILCRGEPVN--GVPNLRDDPSFTWEADGIGSFAVDGDKGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVQSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGES-FPTGWVWAQGCSATKGLCGNVFRDGELTNPDGGSAQEASAGRRAAGGKADGLGGSKKDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHNWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPEGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQD 703
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A835Z7D9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D9_9STRA) HSP 1 Score: 227 bits (578), Expect = 1.390e-65 Identity = 138/393 (35.11%), Postives = 202/393 (51.40%), Query Frame = 2 Query: 176 ASPFSPH----PLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAG-----ADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFRE------DDKGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLP--ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKS-SWSHAEHRLNVTASSFLGRRVIKAS--VQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294 ASPF P P + +FF+GWFLR+VDHE + S +I+ S R G A H+ + Y D KG + T++ F + D G P + P R + P+F W+A GVG + + + G ++ V E S+ A F R+PWS+ +PN GPEGWL T LLPL YF+HSFGS Y SG G +H+E NYG FP WVW +G + T + +I G+ + F++TGG+F IGP+T+ ++VI R +W+FR TDLD + + S + + A S R+++ + A E SFG +P +GW+ PG ES+NA A+F Y + +L+L E V ++ +EFGG + Sbjct: 4 ASPFEPREPPPPWPFQQSSFFDGWFLRLVDHENKFSFCLILGSLREHGKPCTRASGGYSSHFVGISYL-----DSKG-KTHTYNFFPDPRAVSIDANGAPPV--RRPSRSTPPNFRWSAAGVGELLVQPESGTLEFSVPEASVKAKFHGRIPWSRSRPNKDGPEGWLAGTGLLPLHYFVHSFGSAAEYEFEAKHDKAEKCSGSGRLHMECNYGDM-FPHAWVWGQGCSRPPTM--ATHLGDGSIGSGDIPADFQQLSFVLTGGQFRIGPLTSQAWVIALRWGDEEWNFRTTDLDEVTTLQLSRKARAIRLRALSRCKTRLLEVRDVLVAPEHSFGKPIAVPTHKGWSTSPGCVESYNAAASFRCYHKEHGQWQLIL--EKQVPLAAMEFGGAY 383
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A4D9CRK3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRK3_9STRA) HSP 1 Score: 223 bits (568), Expect = 7.120e-63 Identity = 135/409 (33.01%), Postives = 202/409 (49.39%), Query Frame = 2 Query: 137 ILGVFIAWLGFSAASPFSPHPLG-SLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRIS-----------DPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLP-----------ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLY-ERRLPFMKLVLVEEAVVTMSVLEFGGE 1291 +L +F+ +L S ASPF PHPL L FF GW++R+ DHEKQ++ I+ S++ GA++ EHY L Y ++ ++QT H F PPD ++ +FTW A GVG + + D G +D+ + + +A+F RVPW+ ++P+ GPEGWLG+T LLP RYF+HS S TY++ P ++G+G H+E+N+G CFP W+W + + ++ +M GGKF IGP ++++ RSP +W FR TDLD + + + L V A S GRR + S+ A GSFG Y+P +G++ PG ES A E ++V E V ++ LE GGE Sbjct: 130 LLPIFL-FLHSSQASPFDPHPLPLMLSLCFFNGWYIRVTDHEKQVAFAAIVGSFKHPGANNY-TEHYVGLVYA------DRSGKMQTAHAF------------PPPDSVTIERGSEGFDGVPSNFTWRAKGVGRLHVGKDEGMLDIDLPAVRATAHFHDRVPWNAERPDTDGPEGWLGRTPLLPCRYFVHSLASRTTYSLRLRPRPPSLATSTRPPTHLAGQGYAHMESNHGN-CFPSAWIWCNAIGPDRAVS-----------------------LLMVGGKFEIGPSAPTTWILTLRSPRFNWVFRTTDLDEVNAHLQYTTGTLQVQARSRCGRRRLTVSLCAPVGSFGAPIYVPTAQGFSCQPGCRESFTGKAIIRAVDEGEGGGGRIVREETHEVPLAALELGGE 494
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A7S4PYL0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PYL0_9DINO) HSP 1 Score: 216 bits (551), Expect = 1.060e-61 Identity = 130/393 (33.08%), Postives = 190/393 (48.35%), Query Frame = 2 Query: 170 SAASPFSPHPLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFI-IGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEFVD-PSHLHGRCEVEIEP 1342 + ASPF PHP FF+GWF RIVDHE+ +S VII S++ A S + L G + H + D + P +S+ FTW + G + ++ + + L + A S RVPWS + P+ GPEGW+ + L Y++HS S YT+TPAG I GRG H+E NYGR FP+GW+W + + ++ GG++ ++T G+F+ +GP+ ++ V+ YRSP WDFR TDLD I S A + A + ++ +VQA GSF DR Y P G+++ PG ES++A Y R V +E V ++ LEFGG ++D P G C + P Sbjct: 20 AVASPFDPHP-AQRSGPFFDGWFTRIVDHERGVSAAVIIGSFQPARDGSFNSTWVALLH-----RGAGSNTTVVEQHFLDQSDVRVESRSLPEPGYVSN--FTWRSTR-GELEVNDSAALLSFAFDSLHVRARLSARVPWSAEAPDAAGPEGWVRRLPALTCHYYVHSLASRAEYTLTPAGGSAIEGRGHAHMEGNYGRT-FPQGWIWLQAIGAS-----------------------GGVQVVLTAGRFLSLGPLGISAVVMAYRSPQLHWDFRTTDLDAICWRGSAAGGWFSAVARHWTRDEELRLTVQAPPGSFSDRLYFPTRSGFSDTPGCRESYSAVVDVVAYRRG------VALERQRVPLAALEFGGTYLDSPESAEGSCALGTRP 373
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A812WCK3_9DINO (VTE4 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812WCK3_9DINO) HSP 1 Score: 123 bits (308), Expect = 7.800e-26 Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 2 Query: 557 ISANFSTRVPWSKDQPNNYGPEGWLGQ--TDLLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF--VDPS 1306 +SA S R+ W+ D+P GPEGW+ + + +LP YF+ + S Y + + G+G H E NYG+ FP +VW++G I DG T + ++TGGKF I +TTN +++ +RS W FR D + ++ A S GRR ++ + A SF + ++P +G++ PG+TE+H ATA L+E R + + E A + LEFGG + DPS Sbjct: 130 LSAQLSGRILWNADKPLE-GPEGWVQRLPSAMLPTHYFVETLASPTDYELNG-----LQGQGFAHQEMNYGKR-FPSAFVWSQG-----------------IADGGTT------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARS-RGRR-LELMISAPLSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLWEAR----QKRVAEYATFKQAALEFGGHYNCADPS 347
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A812JPH0_9DINO (VTE4 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPH0_9DINO) HSP 1 Score: 119 bits (297), Expect = 2.380e-24 Identity = 77/250 (30.80%), Postives = 119/250 (47.60%), Query Frame = 2 Query: 551 LSISANFSTRVPWSKDQPNNYGPEGWLGQTD--LLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294 L +SA S R+ W+ ++P GPEGW + +LP YF+ + S Y + G+G H E NYG+ FP +VW++G I DG T + ++TGGKF I +TTN +++ +RS W FR D + ++ A S GRR ++ + A SF + ++P +G++ PG+TE+H ATA L+E R + + E A + LEFGG + Sbjct: 146 LRLSAQLSGRILWNAEKPLE-GPEGWARRLPPAMLPTHYFVETLASPTDYELNGH-----QGQGFAHQEMNYGKR-FPSAFVWSQG-----------------IADGGTT------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARS-RGRR-LELVISAPVSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLWEAR----QKRVAEYATFKQAALEFGGHY 359
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A2K1LBY6_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LBY6_PHYPA) HSP 1 Score: 111 bits (278), Expect = 1.850e-22 Identity = 101/384 (26.30%), Postives = 159/384 (41.41%), Query Frame = 2 Query: 182 PFSPHPLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRISD----PD-FTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVT-PAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHA--EHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPE-GWTNLPGATESHNATATFHLYER---RLPFMKLVLVEEAVVTMSVLEFGGEFV 1297 P P+P FEGWF+RI+D + S VI+++ D + + G GD + + + R K + + P+ F W A+GVG ++++ V ++ VE + A+ + + W + GPEGW ++P ++++S GS V YT + P ++ G H+E N+G+ FP G +W +G+ S D ++ G F K +T FV+GYRSP DFR DL + + A E R +VTA +K QA +F D P + W P ES AT +YE +P + LVE + LEFG + + Sbjct: 177 PLRPYPS-------FEGWFVRIMDPTNKFSAAVILAT--NYATDESQVTLLFAPGRNADKEGDREAVKYGYTYAVRIKTKDAKFTKKEQDEEWENKGEKPEGFEWEANGVGRISVTPHVTDVECTVEGYTFKAHLTKELLWDAHKSEK-GPEGWARYVSIIPTHWYVYSLGSTVEYTFSNPEKNIHSEGSAFGHVEKNWGQT-FPAGHIWMQGISS----------------DNTAQVCCSGAYFKTPNEKLE----STYVFVLGYRSPKLQLDFRTNDLGIVFKDFEFATLEGRASVTAVG--PSHTVKIKAQAPFDTFSDPVLAPVTKTDWK--PACRESFVATIEVEVYEHFAWGIPGTEN-LVETMKFEYAALEFGEDLL 524
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A0G4EZ58_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZ58_VITBC) HSP 1 Score: 106 bits (265), Expect = 1.490e-20 Identity = 70/199 (35.18%), Postives = 102/199 (51.26%), Query Frame = 2 Query: 722 ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQ---GLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGR----RVIKASVQAAEGSFGDR-FYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294 I GRG H+EAN+G FP GW WA+G T + V+ + D ++ ++TGG F IGPI+ S+V+ YRSP WDFR TDL ++ + S A+ R+ + S R R + +++A SF D +P PEG+++ PG ESH A A + + L+E+ V + LEFGG F Sbjct: 540 ILGRGSTHLEANWGDM-FPSGWTWAQGCARTALPPSPSPQPLVHSSSSSD---------VQLLLTGGIFRIGPISPLSWVVAYRSPFVQWDFRTTDLHRVEYAISSAQRRVRLVCESRPDRHGYYRRLMIALEAPLWSFTDPPISIPTPEGFSDRPGCVESHVARADVKAFLVNQEDGRSGLIEQRTVPLCALEFGGMF 728
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: W7TUT3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUT3_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.340e-20 Identity = 60/183 (32.79%), Postives = 91/183 (49.73%), Query Frame = 2 Query: 125 ISHAILGVFIAWLGFSAASPFSPHPLG-SLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRIS-----------DPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQ 637 I +L +L S ASPF PHPL L FF GW++R+ DHEKQ++ I+ S++ GA + EHY L Y ++ ++QT H F PPD ++ +FTW A GVG + + D G +D+ + + +A+F RVPW+ ++P+ GPE G+ Sbjct: 122 IGPGVLLPLFLFLHSSQASPFDPHPLPLMLSLCFFNGWYIRVTDHEKQVAFAAIVGSFKHPGA-TNYTEHYVGLVYA------DRSGKMQTAHAF------------PPPDSVTIERGSEGFDGVPSNFTWKAKGVGRLHVGKDEGLLDIDLPGMRATAHFHDRVPWNAERPDTDGPEVGTGR 285 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig668.6.3 >prot_C-tenellus_contig668.6.3 ID=prot_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=414bp MRISHAILGVFIAWLGFSAASPFSPHPLGSLKQAFFEGWFLRIVDHEKQIback to top mRNA from alignment at C-tenellus_contig668:11302..13601- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig668.6.3 ID=mRNA_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2300bp|location=Sequence derived from alignment at C-tenellus_contig668:11302..13601- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig668:11302..13601- >mRNA_C-tenellus_contig668.6.3 ID=mRNA_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1242bp|location=Sequence derived from alignment at C-tenellus_contig668:11302..13601- (Choristocarpus tenellus KU2346)back to top |