mRNA_C-tenellus_contig668.6.3 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig668.6.3
Unique NamemRNA_C-tenellus_contig668.6.3
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A6H5KYR0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR0_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 4.760e-80
Identity = 147/346 (42.49%), Postives = 206/346 (59.54%), Query Frame = 2
Query:  368 DEKGQRIQTWHVFREDD------KGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGS-LPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGK-------NIEDGETKMKTGGIK---------------FIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPF------MKLVLVEEAVVTMSVLEFGGEFVD 1300
            DE  +R  T+H F   D      +G P      P+   DP FTW ADG+GS  + GD G++   + ELS++A+F  R  WS+++PN+ GPEGWL +T LLPL YF+HS GS+  Y++   G+   + GRG +H+EANYG + FP GWVWA+G  +TQGL G  F +G+       ++++G  + +  G K               F++TGG+F+IGPITT SFV+ +RS  H W+FR TDLD I  + S  +HRL + A S+   RV+KA ++A EGSFG   Y+P P+G++N PG  ES+ ATA F LY +            LVL EE    ++ LEFGGE+ D
Sbjct:  531 DEATERTHTFHAFPPADTVTILCRGEPVN--GVPNLRDDPSFTWEADGIGSFAVDGDTGRLSFQLPELSVAASFRYRQAWSEERPNSAGPEGWLQRTGLLPLHYFVHSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGES-FPTGWVWAQGCSATQGLCGNVFRDGELTNPDGGSVQEGSARRRAAGGKADGLAGPKRDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHKWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPDGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQD 873          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: D8LQ64_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ64_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 8.110e-80
Identity = 147/346 (42.49%), Postives = 205/346 (59.25%), Query Frame = 2
Query:  368 DEKGQRIQTWHVFREDD------KGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGS-LPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGK--NIEDGETKMKTGGIK--------------------FIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPF------MKLVLVEEAVVTMSVLEFGGEFVD 1300
            DE  +R  T+H F   D      +G P      P+   DP FTW ADG+GS  + GD G++   + ELS++A+F  R PWS+++PN+ GPEGWL +T LLPL YF+ S GS+  Y++   G+   + GRG +H+EANYG + FP GWVWA+G  +T+GL G  F +G+  N + G  +  + G +                    F++TGG+F+IGPITT SFV+ +RS  H+W+FR TDLD I  + S  +HRL + A S+   RV+KA ++A EGSFG   Y+P PEG++N PG  ES+ ATA F LY +            LVL EE    ++ LEFGGE+ D
Sbjct:  361 DEATERTHTFHAFPPADTVTILCRGEPVN--GVPNLRDDPSFTWEADGIGSFAVDGDKGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVQSMGSEAGYSLKATGAPRAVVGRGSIHMEANYGES-FPTGWVWAQGCSATKGLCGNVFRDGELTNPDGGSAQEASAGRRAAGGKADGLGGSKKDSATPRFVLTGGRFVIGPITTTSFVLAFRSERHNWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPEGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQD 703          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A835Z7D9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D9_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.390e-65
Identity = 138/393 (35.11%), Postives = 202/393 (51.40%), Query Frame = 2
Query:  176 ASPFSPH----PLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAG-----ADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFRE------DDKGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLP--ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKS-SWSHAEHRLNVTASSFLGRRVIKAS--VQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294
            ASPF P     P    + +FF+GWFLR+VDHE + S  +I+ S R  G     A      H+  + Y      D KG +  T++ F +      D  G P +    P R + P+F W+A GVG + +  + G ++  V E S+ A F  R+PWS+ +PN  GPEGWL  T LLPL YF+HSFGS   Y            SG G +H+E NYG   FP  WVW +G      +   T +   +I  G+       + F++TGG+F IGP+T+ ++VI  R    +W+FR TDLD + +   S     + + A S    R+++    + A E SFG    +P  +GW+  PG  ES+NA A+F  Y +     +L+L  E  V ++ +EFGG +
Sbjct:    4 ASPFEPREPPPPWPFQQSSFFDGWFLRLVDHENKFSFCLILGSLREHGKPCTRASGGYSSHFVGISYL-----DSKG-KTHTYNFFPDPRAVSIDANGAPPV--RRPSRSTPPNFRWSAAGVGELLVQPESGTLEFSVPEASVKAKFHGRIPWSRSRPNKDGPEGWLAGTGLLPLHYFVHSFGSAAEYEFEAKHDKAEKCSGSGRLHMECNYGDM-FPHAWVWGQGCSRPPTM--ATHLGDGSIGSGDIPADFQQLSFVLTGGQFRIGPLTSQAWVIALRWGDEEWNFRTTDLDEVTTLQLSRKARAIRLRALSRCKTRLLEVRDVLVAPEHSFGKPIAVPTHKGWSTSPGCVESYNAAASFRCYHKEHGQWQLIL--EKQVPLAAMEFGGAY 383          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A4D9CRK3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRK3_9STRA)

HSP 1 Score: 223 bits (568), Expect = 7.120e-63
Identity = 135/409 (33.01%), Postives = 202/409 (49.39%), Query Frame = 2
Query:  137 ILGVFIAWLGFSAASPFSPHPLG-SLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRIS-----------DPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLP-----------ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLY-ERRLPFMKLVLVEEAVVTMSVLEFGGE 1291
            +L +F+ +L  S ASPF PHPL   L   FF GW++R+ DHEKQ++   I+ S++  GA++   EHY  L Y       ++  ++QT H F             PPD ++             +FTW A GVG + +  D G +D+ +  +  +A+F  RVPW+ ++P+  GPEGWLG+T LLP RYF+HS  S  TY++      P           ++G+G  H+E+N+G  CFP  W+W   +   + ++                        +M GGKF IGP    ++++  RSP  +W FR TDLD + +   +    L V A S  GRR +  S+ A  GSFG   Y+P  +G++  PG  ES    A      E      ++V  E   V ++ LE GGE
Sbjct:  130 LLPIFL-FLHSSQASPFDPHPLPLMLSLCFFNGWYIRVTDHEKQVAFAAIVGSFKHPGANNY-TEHYVGLVYA------DRSGKMQTAHAF------------PPPDSVTIERGSEGFDGVPSNFTWRAKGVGRLHVGKDEGMLDIDLPAVRATAHFHDRVPWNAERPDTDGPEGWLGRTPLLPCRYFVHSLASRTTYSLRLRPRPPSLATSTRPPTHLAGQGYAHMESNHGN-CFPSAWIWCNAIGPDRAVS-----------------------LLMVGGKFEIGPSAPTTWILTLRSPRFNWVFRTTDLDEVNAHLQYTTGTLQVQARSRCGRRRLTVSLCAPVGSFGAPIYVPTAQGFSCQPGCRESFTGKAIIRAVDEGEGGGGRIVREETHEVPLAALELGGE 494          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A7S4PYL0_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PYL0_9DINO)

HSP 1 Score: 216 bits (551), Expect = 1.060e-61
Identity = 130/393 (33.08%), Postives = 190/393 (48.35%), Query Frame = 2
Query:  170 SAASPFSPHPLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFI-IGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEFVD-PSHLHGRCEVEIEP 1342
            + ASPF PHP       FF+GWF RIVDHE+ +S  VII S++ A   S +      L       G      +   H   + D    +     P  +S+  FTW +   G + ++     +    + L + A  S RVPWS + P+  GPEGW+ +   L   Y++HS  S   YT+TPAG   I GRG  H+E NYGR  FP+GW+W + + ++                       GG++ ++T G+F+ +GP+  ++ V+ YRSP   WDFR TDLD I    S A    +  A  +     ++ +VQA  GSF DR Y P   G+++ PG  ES++A      Y R       V +E   V ++ LEFGG ++D P    G C +   P
Sbjct:   20 AVASPFDPHP-AQRSGPFFDGWFTRIVDHERGVSAAVIIGSFQPARDGSFNSTWVALLH-----RGAGSNTTVVEQHFLDQSDVRVESRSLPEPGYVSN--FTWRSTR-GELEVNDSAALLSFAFDSLHVRARLSARVPWSAEAPDAAGPEGWVRRLPALTCHYYVHSLASRAEYTLTPAGGSAIEGRGHAHMEGNYGRT-FPQGWIWLQAIGAS-----------------------GGVQVVLTAGRFLSLGPLGISAVVMAYRSPQLHWDFRTTDLDAICWRGSAAGGWFSAVARHWTRDEELRLTVQAPPGSFSDRLYFPTRSGFSDTPGCRESYSAVVDVVAYRRG------VALERQRVPLAALEFGGTYLDSPESAEGSCALGTRP 373          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A812WCK3_9DINO (VTE4 protein (Fragment) n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812WCK3_9DINO)

HSP 1 Score: 123 bits (308), Expect = 7.800e-26
Identity = 80/254 (31.50%), Postives = 124/254 (48.82%), Query Frame = 2
Query:  557 ISANFSTRVPWSKDQPNNYGPEGWLGQ--TDLLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF--VDPS 1306
            +SA  S R+ W+ D+P   GPEGW+ +  + +LP  YF+ +  S   Y +       + G+G  H E NYG+  FP  +VW++G                 I DG T       + ++TGGKF I  +TTN +++ +RS    W FR  D    +          ++ A S  GRR ++  + A   SF +  ++P  +G++  PG+TE+H ATA   L+E R    +  + E A    + LEFGG +   DPS
Sbjct:  130 LSAQLSGRILWNADKPLE-GPEGWVQRLPSAMLPTHYFVETLASPTDYELNG-----LQGQGFAHQEMNYGKR-FPSAFVWSQG-----------------IADGGTT------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARS-RGRR-LELMISAPLSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLWEAR----QKRVAEYATFKQAALEFGGHYNCADPS 347          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A812JPH0_9DINO (VTE4 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPH0_9DINO)

HSP 1 Score: 119 bits (297), Expect = 2.380e-24
Identity = 77/250 (30.80%), Postives = 119/250 (47.60%), Query Frame = 2
Query:  551 LSISANFSTRVPWSKDQPNNYGPEGWLGQTD--LLPLRYFIHSFGSDVTYTVTPAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294
            L +SA  S R+ W+ ++P   GPEGW  +    +LP  YF+ +  S   Y +         G+G  H E NYG+  FP  +VW++G                 I DG T       + ++TGGKF I  +TTN +++ +RS    W FR  D    +          ++ A S  GRR ++  + A   SF +  ++P  +G++  PG+TE+H ATA   L+E R    +  + E A    + LEFGG +
Sbjct:  146 LRLSAQLSGRILWNAEKPLE-GPEGWARRLPPAMLPTHYFVETLASPTDYELNGH-----QGQGFAHQEMNYGKR-FPSAFVWSQG-----------------IADGGTT------QLVLTGGKFTISGLTTNQYILAFRSKHRQWTFRTIDGHGFRDEVDGCNGTFSLIARS-RGRR-LELVISAPVSSFSENIFVPTAKGFSRTPGSTETHTATAVVRLWEAR----QKRVAEYATFKQAALEFGGHY 359          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A2K1LBY6_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1LBY6_PHYPA)

HSP 1 Score: 111 bits (278), Expect = 1.850e-22
Identity = 101/384 (26.30%), Postives = 159/384 (41.41%), Query Frame = 2
Query:  182 PFSPHPLGSLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRISD----PD-FTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVT-PAGSLPISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHA--EHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPE-GWTNLPGATESHNATATFHLYER---RLPFMKLVLVEEAVVTMSVLEFGGEFV 1297
            P  P+P        FEGWF+RI+D   + S  VI+++      D   +    + G      GD +  +    +  R   K          +   +    P+ F W A+GVG ++++  V  ++  VE  +  A+ +  + W   +    GPEGW     ++P  ++++S GS V YT + P  ++   G    H+E N+G+  FP G +W +G+ S                D   ++   G  F     K      +T  FV+GYRSP    DFR  DL  +   +  A  E R +VTA        +K   QA   +F D    P  +  W   P   ES  AT    +YE     +P  +  LVE      + LEFG + +
Sbjct:  177 PLRPYPS-------FEGWFVRIMDPTNKFSAAVILAT--NYATDESQVTLLFAPGRNADKEGDREAVKYGYTYAVRIKTKDAKFTKKEQDEEWENKGEKPEGFEWEANGVGRISVTPHVTDVECTVEGYTFKAHLTKELLWDAHKSEK-GPEGWARYVSIIPTHWYVYSLGSTVEYTFSNPEKNIHSEGSAFGHVEKNWGQT-FPAGHIWMQGISS----------------DNTAQVCCSGAYFKTPNEKLE----STYVFVLGYRSPKLQLDFRTNDLGIVFKDFEFATLEGRASVTAVG--PSHTVKIKAQAPFDTFSDPVLAPVTKTDWK--PACRESFVATIEVEVYEHFAWGIPGTEN-LVETMKFEYAALEFGEDLL 524          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: A0A0G4EZ58_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EZ58_VITBC)

HSP 1 Score: 106 bits (265), Expect = 1.490e-20
Identity = 70/199 (35.18%), Postives = 102/199 (51.26%), Query Frame = 2
Query:  722 ISGRGLMHIEANYGRACFPKGWVWAEGMDSTQ---GLNGGTFVNGKNIEDGETKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKSSWSHAEHRLNVTASSFLGR----RVIKASVQAAEGSFGDR-FYMPGPEGWTNLPGATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEF 1294
            I GRG  H+EAN+G   FP GW WA+G   T      +    V+  +  D         ++ ++TGG F IGPI+  S+V+ YRSP   WDFR TDL  ++ + S A+ R+ +   S   R    R +  +++A   SF D    +P PEG+++ PG  ESH A A    +       +  L+E+  V +  LEFGG F
Sbjct:  540 ILGRGSTHLEANWGDM-FPSGWTWAQGCARTALPPSPSPQPLVHSSSSSD---------VQLLLTGGIFRIGPISPLSWVVAYRSPFVQWDFRTTDLHRVEYAISSAQRRVRLVCESRPDRHGYYRRLMIALEAPLWSFTDPPISIPTPEGFSDRPGCVESHVARADVKAFLVNQEDGRSGLIEQRTVPLCALEFGGMF 728          
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Match: W7TUT3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TUT3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.340e-20
Identity = 60/183 (32.79%), Postives = 91/183 (49.73%), Query Frame = 2
Query:  125 ISHAILGVFIAWLGFSAASPFSPHPLG-SLKQAFFEGWFLRIVDHEKQISLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDDKGGPTIPPSPPDRIS-----------DPDFTWAADGVGSVTISGDVGQIDMVVEELSISANFSTRVPWSKDQPNNYGPEGWLGQ 637
            I   +L     +L  S ASPF PHPL   L   FF GW++R+ DHEKQ++   I+ S++  GA +   EHY  L Y       ++  ++QT H F             PPD ++             +FTW A GVG + +  D G +D+ +  +  +A+F  RVPW+ ++P+  GPE   G+
Sbjct:  122 IGPGVLLPLFLFLHSSQASPFDPHPLPLMLSLCFFNGWYIRVTDHEKQVAFAAIVGSFKHPGA-TNYTEHYVGLVYA------DRSGKMQTAHAF------------PPPDSVTIERGSEGFDGVPSNFTWKAKGVGRLHVGKDEGLLDIDLPGMRATAHFHDRVPWNAERPDTDGPEVGTGR 285          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig668.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KYR0_9PHAE4.760e-8042.49Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ64_ECTSI8.110e-8042.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z7D9_9STRA1.390e-6535.11Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A4D9CRK3_9STRA7.120e-6333.01Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4PYL0_9DINO1.060e-6133.08Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
A0A812WCK3_9DINO7.800e-2631.50VTE4 protein (Fragment) n=1 Tax=Symbiodinium necro... [more]
A0A812JPH0_9DINO2.380e-2430.80VTE4 protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A2K1LBY6_PHYPA1.850e-2226.30Uncharacterized protein n=1 Tax=Physcomitrium pate... [more]
A0A0G4EZ58_VITBC1.490e-2035.18Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
W7TUT3_9STRA2.340e-2032.79Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig668contigC-tenellus_contig668:11302..13601 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3218.PP1S295_29V6.1
PFAMsTocopherol_cycl
Model size1607
Max annot lvl35493|Streptophyta
Hectar predicted targeting categorychloroplast
Exons3
Evalue7.99e-24
EggNOG OGs2E20H@1|root,2S99N@2759|Eukaryota,37WSX@33090|Viridiplantae,3GP7R@35493|Streptophyta
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-26_005990.1
DescriptionTocopherol cyclase
Cds size1242
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.3841407-UTR-C-tenellus_contig668:11301..115481680789984.3841407-UTR-C-tenellus_contig668:11301..11548Choristocarpus tenellus KU2346UTRC-tenellus_contig668 11302..11548 -
1680789984.4259384-UTR-C-tenellus_contig668:13483..136011680789984.4259384-UTR-C-tenellus_contig668:13483..13601Choristocarpus tenellus KU2346UTRC-tenellus_contig668 13484..13601 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789984.3948264-CDS-C-tenellus_contig668:11548..122511680789984.3948264-CDS-C-tenellus_contig668:11548..12251Choristocarpus tenellus KU2346CDSC-tenellus_contig668 11549..12251 -
1680789984.4043312-CDS-C-tenellus_contig668:12601..129391680789984.4043312-CDS-C-tenellus_contig668:12601..12939Choristocarpus tenellus KU2346CDSC-tenellus_contig668 12602..12939 -
1680789984.4140508-CDS-C-tenellus_contig668:13282..134831680789984.4140508-CDS-C-tenellus_contig668:13282..13483Choristocarpus tenellus KU2346CDSC-tenellus_contig668 13283..13483 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig668.6.3prot_C-tenellus_contig668.6.3Choristocarpus tenellus KU2346polypeptideC-tenellus_contig668 11549..13483 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig668.6.3

>prot_C-tenellus_contig668.6.3 ID=prot_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=414bp
MRISHAILGVFIAWLGFSAASPFSPHPLGSLKQAFFEGWFLRIVDHEKQI
SLVVIISSYRRAGADSEDLEHYCSLGYQKPPNGDEKGQRIQTWHVFREDD
KGGPTIPPSPPDRISDPDFTWAADGVGSVTISGDVGQIDMVVEELSISAN
FSTRVPWSKDQPNNYGPEGWLGQTDLLPLRYFIHSFGSDVTYTVTPAGSL
PISGRGLMHIEANYGRACFPKGWVWAEGMDSTQGLNGGTFVNGKNIEDGE
TKMKTGGIKFIMTGGKFIIGPITTNSFVIGYRSPLHDWDFRNTDLDCIKS
SWSHAEHRLNVTASSFLGRRVIKASVQAAEGSFGDRFYMPGPEGWTNLPG
ATESHNATATFHLYERRLPFMKLVLVEEAVVTMSVLEFGGEFVDPSHLHG
RCEVEIEPTGDLP*
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mRNA from alignment at C-tenellus_contig668:11302..13601-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig668.6.3 ID=mRNA_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=mRNA|length=2300bp|location=Sequence derived from alignment at C-tenellus_contig668:11302..13601- (Choristocarpus tenellus KU2346)
CAATACCTTGAACTATTGTCAATACACAACACTTCTTAAAACGCACCAAG GTCAATTGAGTGGGAGGATTTGCAAAAGGAAAGGTGACATTTAGAGGCAC TAGTAAAGAGTAGTTGACATGCGAATCTCACATGCGATTCTTGGGGTCTT TATAGCATGGCTTGGTTTCTCCGCTGCATCACCTTTCAGTCCACACCCTT TGGGATCTCTCAAGCAGGCATTTTTTGAGGGATGGTTCCTGAGGATAGTA GACCACGAGAAGCAAATATCGTTGGTTGTCATCATTTCTTCATACCGTAG AGCTGGAGCTGACTCTGAGGTGAAATGACCTAAAGAGCAATCGTGTCTTT CTTTTTCATGGTGCCGCTTTTCTCCCCATCCCACCCTTTCAAATTTGCAT GTTTATGGTCAACTCCTGTCATGTATGTTAAGATCAATTGACTTTCAAAC AAAATGGGAATTGCGCCCATCCCAACTTCCTGGACCTCACGATGTGCACT GTAGGTAGCTGGAACACAGCTTGACCGAGTCTTTCAACCCGGAAATAGAA GTACACTCTGGTCGACCAACGGCATCAATTCAAATCATTCCCTACAGTTT GCATTGTGTTATAGAGACACGTATGTGGTAATATTTTTATGTCATCACTT CGTTTTTAGCAGGATCTGGAGCACTACTGCTCGCTGGGATATCAGAAGCC ACCAAATGGTGATGAAAAAGGACAACGAATCCAAACTTGGCATGTTTTTA GAGAGGATGATAAAGGGGGACCGACGATACCACCTTCTCCACCAGACCGA ATATCGGATCCTGATTTTACCTGGGCGGCAGACGGAGTCGGGTCGGTGAC CATCTCTGGGGACGTCGGGCAAATCGATATGGTCGTGGAAGAGCTTAGCA TCTCTGCCAACTTTTCGACCCGTGTTCCATGGTCCAAGGACCAGCCAAAT AACTACGGCCCAGAAGGCTGGCTAGGACAGACAGACCTTTTGCCCCTCAG GTCAGTTGCCTTACTGCAGTTCATGCTTTGCATCATGTTGGAGTATCACC TCAGCAACGTTGCCTTTGTCATTGATACCTGTTCCTCAGGCGTATTAATG TGAGAAGGAATCTGAAGCGCTATTGTAGGTGTGGGTCACAAGAGAGTAAC ATGGCTGGAGATAACCGGAGTAGGGGAGGATAGATGAGGTTGACCTCACT GTAACAGAATAATACGTAGAGTGTGTACAGTCTAGAGTCGAGAAATAAAT TTCCAGCTAGGGAATAACTGTTGAGTGGGAGTTGGACCTGGTGGATGATC TGAGTAGCCATTGTTATCCCACTGACTTGTCCCTCACACCTCTGTATCAG GTATTTCATCCATTCGTTTGGGTCAGATGTAACCTACACTGTTACGCCTG CGGGAAGCCTTCCAATATCTGGAAGGGGCTTGATGCACATCGAGGCTAAC TATGGTCGTGCTTGTTTCCCCAAGGGATGGGTCTGGGCAGAGGGCATGGA TAGCACCCAAGGCCTCAATGGGGGAACATTTGTTAATGGGAAAAACATTG AGGATGGGGAGACAAAGATGAAAACAGGAGGGATCAAGTTTATTATGACA GGGGGCAAGTTTATCATTGGTCCTATCACTACAAACTCCTTTGTGATAGG TTATCGGTCTCCATTACACGATTGGGACTTCCGAAACACTGACTTGGATT GCATCAAGTCATCCTGGAGTCATGCCGAACACAGACTAAATGTGACTGCA AGCTCTTTTCTAGGTAGGCGTGTTATCAAGGCAAGTGTTCAAGCTGCTGA AGGATCATTTGGTGACAGATTCTACATGCCAGGTCCTGAAGGATGGACCA ATCTACCTGGTGCAACAGAGTCCCACAATGCAACAGCCACGTTCCATCTC TATGAACGGAGGTTGCCATTTATGAAGTTGGTCTTGGTAGAGGAGGCAGT GGTAACAATGTCAGTCCTTGAATTTGGGGGTGAATTTGTAGATCCCTCAC ACTTGCATGGTAGGTGTGAGGTAGAGATAGAGCCCACTGGAGATCTTCCT TGATTCGATGACTGTATGTTCAACTCCTGTAATATTCCTACCTGCTGGAT AGATGCAAGTTCTGATAAAGGGCCTTACCCACCAATATCGCTTTTTCAAA TGCGAGGAATCCCATTTTTTTCTCTTTCATCTACGCCTGATTGTAAACTC CGGTTAGCTGCTCAGTGATGGCGGCAAGAACATACAGTTCAAGACTCCCA AGGATGCAACATACTCATGTTAGCAGTATTTTTTTAAATTCTAATCTATA
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Coding sequence (CDS) from alignment at C-tenellus_contig668:11302..13601-

>mRNA_C-tenellus_contig668.6.3 ID=mRNA_C-tenellus_contig668.6.3|Name=mRNA_C-tenellus_contig668.6.3|organism=Choristocarpus tenellus KU2346|type=CDS|length=1242bp|location=Sequence derived from alignment at C-tenellus_contig668:11302..13601- (Choristocarpus tenellus KU2346)
ATGCGAATCTCACATGCGATTCTTGGGGTCTTTATAGCATGGCTTGGTTT
CTCCGCTGCATCACCTTTCAGTCCACACCCTTTGGGATCTCTCAAGCAGG
CATTTTTTGAGGGATGGTTCCTGAGGATAGTAGACCACGAGAAGCAAATA
TCGTTGGTTGTCATCATTTCTTCATACCGTAGAGCTGGAGCTGACTCTGA
GGATCTGGAGCACTACTGCTCGCTGGGATATCAGAAGCCACCAAATGGTG
ATGAAAAAGGACAACGAATCCAAACTTGGCATGTTTTTAGAGAGGATGAT
AAAGGGGGACCGACGATACCACCTTCTCCACCAGACCGAATATCGGATCC
TGATTTTACCTGGGCGGCAGACGGAGTCGGGTCGGTGACCATCTCTGGGG
ACGTCGGGCAAATCGATATGGTCGTGGAAGAGCTTAGCATCTCTGCCAAC
TTTTCGACCCGTGTTCCATGGTCCAAGGACCAGCCAAATAACTACGGCCC
AGAAGGCTGGCTAGGACAGACAGACCTTTTGCCCCTCAGGTATTTCATCC
ATTCGTTTGGGTCAGATGTAACCTACACTGTTACGCCTGCGGGAAGCCTT
CCAATATCTGGAAGGGGCTTGATGCACATCGAGGCTAACTATGGTCGTGC
TTGTTTCCCCAAGGGATGGGTCTGGGCAGAGGGCATGGATAGCACCCAAG
GCCTCAATGGGGGAACATTTGTTAATGGGAAAAACATTGAGGATGGGGAG
ACAAAGATGAAAACAGGAGGGATCAAGTTTATTATGACAGGGGGCAAGTT
TATCATTGGTCCTATCACTACAAACTCCTTTGTGATAGGTTATCGGTCTC
CATTACACGATTGGGACTTCCGAAACACTGACTTGGATTGCATCAAGTCA
TCCTGGAGTCATGCCGAACACAGACTAAATGTGACTGCAAGCTCTTTTCT
AGGTAGGCGTGTTATCAAGGCAAGTGTTCAAGCTGCTGAAGGATCATTTG
GTGACAGATTCTACATGCCAGGTCCTGAAGGATGGACCAATCTACCTGGT
GCAACAGAGTCCCACAATGCAACAGCCACGTTCCATCTCTATGAACGGAG
GTTGCCATTTATGAAGTTGGTCTTGGTAGAGGAGGCAGTGGTAACAATGT
CAGTCCTTGAATTTGGGGGTGAATTTGTAGATCCCTCACACTTGCATGGT
AGGTGTGAGGTAGAGATAGAGCCCACTGGAGATCTTCCTTGA
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