mRNA_C-tenellus_contig10126.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: D7FVB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB0_ECTSI) HSP 1 Score: 105 bits (262), Expect = 4.840e-23 Identity = 101/193 (52.33%), Postives = 116/193 (60.10%), Query Frame = 1 Query: 4 GSGLGFNASHNTSPAAGSGGS---PL--GFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFGG-PNSSEGEGGPRFGVRTCTPAAAXXXXXXXXXXGG-------SAVPM--GFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETPKSGSTSGVA 537 GSG G S + AAG+ + P+ GFDMSKFRKPGEWKC AC V+N P+ KCLSCE KPGA XXXXXXXXXXXXXXXXX F+FG P++ XXXXXXXXXX S P GFDMSKFRKPGEWKC ACLV+N + +KCLSCE P+ G + G + Sbjct: 2172 GSGGGAKTSEPSKVAAGAAAASSAPITNGFDMSKFRKPGEWKCGACLVRNPPDATKCLSCEVPKPGASAX-----XXXXXXXXXXXXXXXXXTPKFTFGVVPDAGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTAPTAGGFDMSKFRKPGEWKCAACLVRNPPDATKCLSCEVPRPGVSDGAS 2359
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A6H5L7J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7J5_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 2.790e-17 Identity = 81/156 (51.92%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 100 PGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFG--------GPNSSEGEGGPRFGVRTCTPAAAXXXXXXXXXXGGSAVPM--GFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETPKSGSTSGVA 537 PGEWKC AC V+N P+ KCLSCE KPGA + XXXXXXXXXXXXXXXXX F+FG XXXXXXXX S P GFDMSKFRKPGEWKC ACLV+N + +KCLSCE PK G++ G + Sbjct: 2457 PGEWKCGACLVRNPPDATKCLSCEVPKPGASPAA-----XXXXXXXXXXXXXXXXXPKFTFGVVPDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTSTAPTAGGFDMSKFRKPGEWKCDACLVRNPPDATKCLSCEVPKPGASGGAS 2607
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: UPI0018ED945A (ranBP2-like and GRIP domain-containing protein 3 isoform X4 n=7 Tax=Micropterus TaxID=27705 RepID=UPI0018ED945A) HSP 1 Score: 65.5 bits (158), Expect = 3.830e-9 Identity = 43/156 (27.56%), Postives = 56/156 (35.90%), Query Frame = 1 Query: 43 PAAGSGGSPLGFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFGGPNSSEGEGGPRFGVRTCTPAAAXXXXXXXXXXGGSAVPMGFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETP 510 P+ + GS G SK KPG+W C C V+N DKC+SC+A K T T A GSAV GF +KPG+W C C V+N T KC++C++P Sbjct: 1513 PSISAMGSGFGAQFSK--KPGQWDCDICEVRNEASTDKCISCKALKA----------------------------------------------LPKTTATAQTAPAADAPAVQPSGSAVGSGFGAQFSKKPGQWDCDVCEVRNEASTDKCVACKSP 1620
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A210QD00_MIZYE (RANBP2-like and GRIP domain-containing protein 8 n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QD00_MIZYE) HSP 1 Score: 65.1 bits (157), Expect = 5.170e-9 Identity = 43/141 (30.50%), Postives = 59/141 (41.84%), Query Frame = 1 Query: 103 GEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFGGPNSSEGEGGPRFGVRTCTPAAAXXXXXXXXXXGGSAVPMGFDMSKFRKP--GEWKCQACLVKNGLETSKCLSCETPKSG 519 G W+C CYV N P+ KC++C+A KPG + S +GF FG S G GG +FG GG P +S+ +P G W+C+ C V N + KC++C T K G Sbjct: 1544 GSWECNGCYVSNKPDVQKCVACQALKPGLKSS---------------DVKSSPASSGFKFG---VSSG-GGFKFGKAPAESETKTTPSVSKPAAGGK--PGQQSLSEMFRPASGNWECEGCYVSNKADVQKCVACSTLKPG 1663
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A673XYI3_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XYI3_SALTR) HSP 1 Score: 65.1 bits (157), Expect = 5.170e-9 Identity = 41/146 (28.08%), Postives = 58/146 (39.73%), Query Frame = 1 Query: 94 RKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFG------GPNSSEGEGGPRFGVRTC-TPAAAXXXXXXXXXXGGSAVPMGFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETP 510 +K EW C C V+N + +C+SC+ + P +G GF+FG SS G G FG +C TP + + GF +KPG+W C C V+N + CLSC+TP Sbjct: 1311 KKYEEWDCNVCCVRNAAKVMQCVSCQTANPNVPSNGAASV------------------GGFTFGFGADSSKDTSSSGSIGKGFGCLSCQTPNPSGKPAAGGPALATLSNGSGFGAQFSKKPGQWDCDTCAVRNEASANSCLSCQTP 1438
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A7L1RQL7_9PASS (NU153 protein (Fragment) n=1 Tax=Locustella ochotensis TaxID=187437 RepID=A0A7L1RQL7_9PASS) HSP 1 Score: 64.3 bits (155), Expect = 9.150e-9 Identity = 58/182 (31.87%), Postives = 78/182 (42.86%), Query Frame = 1 Query: 25 ASHNTSPAAGSGGSPLGFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFG-GPNSSEGEGGPRFGVRTC-TPAAAXXXXXXXXXXGGSAVPM-------------GF-DMSKFRKP-GEWKCQACLVKNGLETSKCLSCETPKSG 519 +S T P AG+ LGFD P W C C V+N PE KC++CE KPG XXXXX + G G + +G V A G++VP+ GF D+ KF+KP G W+C+ACLV+N E +KC++C+ K G Sbjct: 665 SSKTTVPTAGT----LGFDDKFKPAPNTWDCDTCLVQNKPEATKCIACETPKPGTGVMPALTMPTVTDSLVTVTSXXXXXGTTVTLGFGDKFKQPKGSWNCSVCLLQNKAEDSKCVACQSEKPGTSVPVTSSSVSAFSASSGGFLDLDKFKKPEGSWECEACLVQNKAEATKCIACDNAKPG 842
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: UPI0015AB4EAB (E3 SUMO-protein ligase RanBP2 isoform X2 n=1 Tax=Anguilla anguilla TaxID=7936 RepID=UPI0015AB4EAB) HSP 1 Score: 64.3 bits (155), Expect = 9.600e-9 Identity = 42/153 (27.45%), Postives = 56/153 (36.60%), Query Frame = 1 Query: 70 LGFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFGGPNSSEGEGGPRFGVRTCTPAAAXXXXXXXXXXGGSAVPMGFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETPKSGSTS 528 L F +K GEW C C ++N P +C++C+ P AE G G SS P FG P S+ P+GF +KPG+W C C V+N C+SC+TP S S Sbjct: 1330 LDFGAVFAKKEGEWDCSVCCIRNTPTAVQCVACQNPNPAAESQPDGRFAATMPAATVPAAGTFTFGFGKEISKDTSSASSTQP-FGSFAQIPTTFKFGTSDA-----SSKPIGFGTQFEKKPGQWDCNTCAVRNEASAGHCVSCQTPNPSSKS 1476
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A060XIH3_ONCMY (Uncharacterized protein n=5 Tax=Oncorhynchus TaxID=8016 RepID=A0A060XIH3_ONCMY) HSP 1 Score: 63.2 bits (152), Expect = 2.390e-8 Identity = 43/152 (28.29%), Postives = 63/152 (41.45%), Query Frame = 1 Query: 94 RKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFG-GPNSSE-----GEGGPRFGVRTCTPAAAXXXXXXXXXXGGSA-----VPMGFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETPKS 516 +K GEW C C V+N + +C++C+ + P A GF+FG G +SS+ G G FG ++ G A + GF +KPG+W+C CLV+N S C+SC+TP S Sbjct: 1346 KKYGEWDCDVCCVRNAAKVMQCVACQTANPNAPSK----LDSAPATDIKGFTSGAASVGGFTFGFGADSSKDTSSAGSIGKGFGSFGAQIPSSFTFGTRKPAVGAPALATLSIGSGFGAQFGKKPGQWECDTCLVRNEESASSCVSCQTPNS 1493
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A673XRX8_SALTR (E3 SUMO-protein ligase RanBP2-like n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A673XRX8_SALTR) HSP 1 Score: 62.4 bits (150), Expect = 4.400e-8 Identity = 51/178 (28.65%), Postives = 68/178 (38.20%), Query Frame = 1 Query: 43 PAAG-------SGGSPLGFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFGGPNSSEGEGGPRFGVRTC------TPAAAXXXXXXXXXXGGSAVPMGFDMSKFRKPGEWKCQACLVKNGLETSKCLSCETPKSGSTSGVA 537 PAAG S GS G SK KPG+W C C V+N + CLSC+ P + + GG G FG + + E R T TP + GF +K G+W C C+V+N +S C+SC+TP + S VA Sbjct: 1410 PAAGGPALATLSNGSGFGAQFSK--KPGQWDCDTCAVRNEASANSCLSCQTPNPSGKAAAGG---------PALATLSTRSGFGAQFG-KKTGQWECDVRNDESTSSCVSCQTPNPPSTMPFGAPASATLSTGSGFGAQFSKKLGQWDCDTCVVRNEASSSSCVSCQTPNPSAKSTVA 1575
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Match: A0A7K4QR59_9TYRA (NU153 protein (Fragment) n=1 Tax=Neopipo cinnamomea TaxID=456388 RepID=A0A7K4QR59_9TYRA) HSP 1 Score: 62.0 bits (149), Expect = 5.720e-8 Identity = 56/178 (31.46%), Postives = 76/178 (42.70%), Query Frame = 1 Query: 43 PAAGSGGSPLGFDMSKFRKPGEWKCQACYVKNGPENDKCLSCEASKPGAEESGGGGXXXXXXXXXXXXXXXXXXXAGFSFG-GPNSSEGEGGPRFGVRTC---TPAAAXXXXXXXXXXGGSAVPM-------------GF-DMSKFRKP-GEWKCQACLVKNGLETSKCLSCETPKSG 519 PAAG+ LGF+ P W C C V N PE KC++CE KPG XXXXX + G G + +G + C A G +VP+ GF D+ KF++P G W+C+ CLV+N E +KC++CE+ KSG Sbjct: 666 PAAGT----LGFEDKFKPAPNTWDCDTCLVHNKPEATKCIACETPKPGTGVMPALTMPVVTDNSVTVTSXXXXXGTTVTLGFGDKFKQPKGS--WNCSMCLLPNKAEDSKCVACQSEKAGFSVPVTSSSVSAFSASSGGFLDLDKFKRPEGSWECEVCLVQNKAEATKCIACESAKSG 837 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10126.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10126.2.1 >prot_C-tenellus_contig10126.2.1 ID=prot_C-tenellus_contig10126.2.1|Name=mRNA_C-tenellus_contig10126.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=179bp SGSGLGFNASHNTSPAAGSGGSPLGFDMSKFRKPGEWKCQACYVKNGPENback to top mRNA from alignment at C-tenellus_contig10126:2106..2642- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10126.2.1 ID=mRNA_C-tenellus_contig10126.2.1|Name=mRNA_C-tenellus_contig10126.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=537bp|location=Sequence derived from alignment at C-tenellus_contig10126:2106..2642- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10126:2106..2642- >mRNA_C-tenellus_contig10126.2.1 ID=mRNA_C-tenellus_contig10126.2.1|Name=mRNA_C-tenellus_contig10126.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=537bp|location=Sequence derived from alignment at C-tenellus_contig10126:2106..2642- (Choristocarpus tenellus KU2346)back to top |