prot_C-tenellus_contig10098.5.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10098.5.1
Unique Nameprot_C-tenellus_contig10098.5.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length452
Homology
BLAST of mRNA_C-tenellus_contig10098.5.1 vs. uniprot
Match: A0A6H5K3C7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C7_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.190e-11
Identity = 120/473 (25.37%), Postives = 168/473 (35.52%), Query Frame = 0
Query:    2 HGLEATKSA--AGRDG-RVPVLPIVIA------EEANWKTGWPLPP--ERARASGVLGVIPQPSHLQVSSSRLFSPEEGWKPIAKSAVAAISKSSLGGGGTMVVEVDAMSSGRPQSLLLPLYVDPEGDEGERKSVKEKIIAMLAMLRFACFYLASRSTSGTSPRTLRMDTIGGDRLPQGMLGMDQAMWGLMALREAWNGRVAVSILSGAMR-PSVMKNERTRNYGSHVAGMGEEVVLIDARAAILSSVLTWAQQCKQDEEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHAKQHRSSVPSGGGVGMREERNGDSQDVTAHVGSAEVWGGSGWLRGDGERNGIKGGEGVVTTRPDTQLLDAMGLVGQTLRKVLSPGWLLLGGVVRPIGSACDWLGSNWRKGVRDGGGNRTDEDKVLQKVLVYDTDDAGSF-----------WYVKEQVRCLKGRLRN 451
             GLE    A  AGR G R P+LP+V++          W++  P P        S V  V P+P + ++   R+F  +E W+P+  SA+A    +S      +V+E DA+SS  PQ+L+ P                                          PR +     GG+    G LG DQA+WGL  LR A   R       GA R  SV+  ER            E  V IDARAA+L SVL WA QC+ D++                                               A        + G V   EE   D+  V           G    R D +  G      V       ++L  +  +G+ +R   +    +   + R +G+   WL  N R+         T  D  +++VLVYDT D  SF           W V+ Q      RLRN
Sbjct:   57 RGLEPALVAPVAGRGGYRTPILPVVVSGGGFRHRSGGWRSSDPAPCFLSEGALSAVAKVSPRPCYYRIGGDRVFC-QEAWQPVV-SALAEAGATSDSRERVLVMEADAVSSDAPQALMSP------------------------------------------PREVE----GGE----GRLGEDQAVWGLAMLRRALEERRREQ---GAGRLASVLLAERR-------LVCAEGSVSIDARAALLLSVLCWAGQCQGDDDA--------------------------------------LADEATTAAAVAGVLGTTEGSVAPGEESGADTAAVAEEEEDTMGVDGDATARADDDEQGRPASTAV-------RVLVVLERMGRGVRVAAARLGQVRSAMGRSLGAVSAWLAKNARR-------RPTTPDAAIKRVLVYDTHDDESFRWLAAKMLKVGWTVERQT---SERLRN 412          
BLAST of mRNA_C-tenellus_contig10098.5.1 vs. uniprot
Match: D8LF10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF10_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.370e-10
Identity = 80/260 (30.77%), Postives = 110/260 (42.31%), Query Frame = 0
Query:    2 HGLEATKSA--AGRDG-RVPVLPIVIA------EEANWKTGWPLPP--ERARASGVLGVIPQPSHLQVSSSRLFSPEEGWKPIAKSAVAAISKSSLGGGGTMVVEVDAMSSGRPQSLLLPLYVDPEGDEGERKSVKEKIIAMLAMLRFACFYLASRSTSGTSPRTLRMDTIGGDRLPQGMLGMDQAMWGLMALREAWNGRVAVSILSGAMR-PSVMKNERTRNYGSHVAGMGEEVVLIDARAAILSSVLTWAQQCKQDEE 249
             GLE    A  AGR G R P+LP+V++          W++  P          S V  V P+P + ++   R+F   E W+P+  SA+A    +S      +V+E DA+SS  PQ+L+ P                                          PR ++    GG+    G LG DQA+WGL  LR A   R       GA R  SV+  ER         G     V IDARAA+L SVL+WA+QC  D++
Sbjct:  167 RGLEPALVAPMAGRGGYRTPILPVVVSGGGFGHRSGGWRSSDPASSFLSEGALSAVAKVSPRPCYYRIGGDRVFC-REAWQPVV-SALAEAGATSDSREIVLVMEADAVSSDAPQTLMSP------------------------------------------PREVK----GGE----GRLGEDQAVWGLAMLRRALEERRRER---GAGRLASVLLAERRLVCAE---GSTTTTVSIDARAALLLSVLSWAEQCHGDDD 368          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10098.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3C7_9PHAE6.190e-1125.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF10_ECTSI2.370e-1030.77Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 255..275
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..323
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 146..451
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10098contigC-tenellus_contig10098:1315..2670 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10098.5.1mRNA_C-tenellus_contig10098.5.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10098 1291..3846 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10098.5.1 ID=prot_C-tenellus_contig10098.5.1|Name=mRNA_C-tenellus_contig10098.5.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=452bp
MHGLEATKSAAGRDGRVPVLPIVIAEEANWKTGWPLPPERARASGVLGVI
PQPSHLQVSSSRLFSPEEGWKPIAKSAVAAISKSSLGGGGTMVVEVDAMS
SGRPQSLLLPLYVDPEGDEGERKSVKEKIIAMLAMLRFACFYLASRSTSG
TSPRTLRMDTIGGDRLPQGMLGMDQAMWGLMALREAWNGRVAVSILSGAM
RPSVMKNERTRNYGSHVAGMGEEVVLIDARAAILSSVLTWAQQCKQDEER
EIEARARAKAEVMAAKAKAAEARAAAAAASATAAAAAAGGGGGGVHAKQH
RSSVPSGGGVGMREERNGDSQDVTAHVGSAEVWGGSGWLRGDGERNGIKG
GEGVVTTRPDTQLLDAMGLVGQTLRKVLSPGWLLLGGVVRPIGSACDWLG
SNWRKGVRDGGGNRTDEDKVLQKVLVYDTDDAGSFWYVKEQVRCLKGRLR
N*
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