prot_C-tenellus_contig10892.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10892.1.2
Unique Nameprot_C-tenellus_contig10892.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length977
Homology
BLAST of mRNA_C-tenellus_contig10892.1.2 vs. uniprot
Match: A0A6H5LGK6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LGK6_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 6.390e-67
Identity = 306/979 (31.26%), Postives = 401/979 (40.96%), Query Frame = 0
Query:   10 SRSVGVISIPVPARPLLQHLVGRGKHQQQKVGGSKTSGRTGGLERVTTRGAGSRQMAQSMLRVRRGFGAADLMVGETALLEEMVCAVHVSDACVQRWMDASVEFLLVDGKSKGAGAKGGEGQKGLQGREIRSGSQRLVTQDEGWGLDRKQGPLGLGHHRGSEAPTVDPGDQVVGVARLQLRDVILSPELGVVSTLDLTEVLDFWDVEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSRGSVGGESASGDHDRPLILGDRAIGALTVSLELVPAEGDSWTPNTSAATEDEHYSVPAVVEVLRDCGGRNQRGLGQHATIENRQEPGEVSQHVGFETRPVGTATGTGGMIPTLDSTRQFWSHQSGAEVILASVPSHDKSAGGAQVDLGGTQRHKGDASDLSVIQEVKGGVSSGDRGA-----FGSRLVDAPRAVEQGEDLMGLLREAREVMSCEVVVGLECAVITSG--------GTSLEGVKVAYSCNQ--GLVHPSDRVVQHSARGKPILQRSLPSVEGTGGAVALPSSARSFALKHQIVTPAAVTQEVLHMW-EDAIQVFEVWGLPTSCELSFETEKEGVGTAGTAPGMRSGVCSEAQGNVLLGLAKVRLSAFASFGKIMGGGTKATATTAADGPILITNPFSGLVVGELTVLLLLREAVS-SMLLSAGGEXXXXXXXXXXXTVTSHLEPLQGLKDQGLLEAGKAPKENEEVEEETCEEGW---KSKVDRHSE-EGAVTKSSSAVPLTLPAYCPSVNDSAEDLSRLLNPKRGEELDSHGQRPRSSPESEKPALGQERTSGEFLGLVRHVVELSAVGKVP--LGEGAD-----ADDPYGLTGCIVEYSLPGDQTCATSSREGHGDSDLSNRSGNVNCSSLANTGHRAHTLWWDADSAILNSRTRHAVKVKALGGSMTDLGLGSPSLSDQKGDWRGGIT-TAGDFDHGNEVHEGSGEGELGKLLDCIFGPNNITFLIY 959
            +R+  V+S+PVP R     L G+GK       G  T+        +TT    SR  A S+LRVRRGFGA DL+VGET+LLEE+VCAV V D CV +WMD +VEFLLVDG++ GA                     RL  ++      RK+            + TV PGD+V  VA   LRD++LS +LGV +TLDL EV DFW  EDA                               R   GG  A     RPL+LGDRA+GAL + LELVP E D            EH S P V E    C    Q+G    A                      G        +P L +            V     PS D   GG   ++GG         D    +   GG + G  G       GS     P     G D  G  +EA   ++ + +      V+  G        G   E V+VAYS  Q  GL   +  V   S RG P          G GGA       + FA  HQ V PA       H+    A +VFEVWG   +   S        G++G   G         Q   LLGLAKV L  FA+     G    +  +  ADGP+ + +PF+G  VG+L +LL L  + + + L   GG+                    +G ++ G          NE+ + E  +EGW   +    R +E EG    +  A P       P+++DS  +LS LLNP R E        P++SP          R+S  F GLVRHVVELSAVG++P  LG+G       A +P G   C +EY L   Q       +G                +      + H LWWDADS ILNSR RH VKV    G + D     P+     G   GG   ++GD          +  G L  LLDC+FG  ++   ++
Sbjct:  673 ARNARVVSVPVPPRVPASTL-GKGKAAPAVRRGRSTA------PGMTTTATSSRS-ATSVLRVRRGFGACDLVVGETSLLEELVCAVDVDDTCVAQWMDTAVEFLLVDGRTDGAPRP------------------RLPAKNHNHPHLRKK----------QRSSTVGPGDRVAAVATFPLRDLVLSADLGVAATLDLIEVSDFWATEDARAAAAGRTGRGGRPLRNPY------------RSDDGGGGA-----RPLVLGDRAVGALAIVLELVPGEPD---------VSPEH-SRPEV-ERWTKCS--RQQGT---AXXXXXXXXXXXXXXXXXXXXXXGVIRTEASSLPPLPA----------GGVGTRREPSAD--GGGGACEVGG---------DACSAEAEPGGWAEGGPGGEKHEPSGSLTATMP----PGLDGHGDWKEASGAVAVDPLDTSFAVVLRIGDLTLAPPLGPGAEQVRVAYSFTQVEGL---TPTVTHRSVRGHP---------SGDGGAQ---QRFKRFAFNHQEVFPAPTESSTWHLGGAGANRVFEVWGCSATGPES--------GSSGGGLG---------QAEALLGLAKVSLRPFAACEGRTG---DSRLSVGADGPVSVVDPFTGKAVGDLHLLLALGASPTIAALAGKGGDAEAGSGAMGDPPTLGGGSNAKGGRETG----------NEKRDRELEDEGWAGLRGGPARGAEGEGGGGMAHEAEP-------PALDDSVAELSMLLNPGRVEG-------PKASPA---------RSSSGFTGLVRHVVELSAVGELPVVLGDGISVGGEGAQEPVG---CAIEYVLRSSQAGLDQDIDG--------------TDTPPTAAGQTHELWWDADSGILNSRARHTVKVP---GGILD----KPATPGSAGSAGGGAAQSSGDAGTDTVAATTTEVGSLNNLLDCMFGREDVVLSLF 1465          
BLAST of mRNA_C-tenellus_contig10892.1.2 vs. uniprot
Match: A0A835YTA2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA2_9STRA)

HSP 1 Score: 106 bits (264), Expect = 2.060e-19
Identity = 89/245 (36.33%), Postives = 112/245 (45.71%), Query Frame = 0
Query:   42 GSKTSGRTGGLERVTTRGAGSRQMAQSMLRVRRGFGAADLMVGETALLEEMVCAVHVSDACVQRWMDASVEFLLVDGKSKGAGAKGGEGQKGLQGREIRSGSQRLVTQDEGWGLDRKQGPLGLGHHRGSEAPTVDPGDQVVGVARLQLRDVILSPELGVVSTLDLTEVLDFWDVEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVSRGSVGGESASGDHDRPLILGDRAIGALTVSLELVPAE 286
            GS+  GR G       RG   RQ  Q MLRVRR +GAADL +GET L EE VCA+ + DA   RWMDA+++ LLVDG  KG                +                     PL                D+VVG+AR+ LR+++LSPEL V ++ D+ EV+DFW                  XXXXXX            RG        G  D  L+LG RA+GAL  +LEL+P E
Sbjct:  274 GSRPGGRVG-------RGKERRQAPQPMLRVRRSYGAADLTIGETTLYEETVCAIELDDATCCRWMDATLDVLLVDGAHKG----------------LPXXXXXXXXXXXXXXXXXXXXPLAASQ------------DRVVGLARVPLRNLLLSPELRVAASADIIEVIDFWG-------------EGGGXXXXXXRRAQQPPLHNPYRGK-------GLEDTDLMLGKRAVGALAATLELLPGE 463          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10892.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LGK6_9PHAE6.390e-6731.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTA2_9STRA2.060e-1936.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 755..776
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 696..728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..143
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 751..790
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..265
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 672..732

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10892contigC-tenellus_contig10892:38..5422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10892.1.2mRNA_C-tenellus_contig10892.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig10892 38..5422 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10892.1.2 ID=prot_C-tenellus_contig10892.1.2|Name=mRNA_C-tenellus_contig10892.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=977bp
QIWGGGKDGSRSVGVISIPVPARPLLQHLVGRGKHQQQKVGGSKTSGRTG
GLERVTTRGAGSRQMAQSMLRVRRGFGAADLMVGETALLEEMVCAVHVSD
ACVQRWMDASVEFLLVDGKSKGAGAKGGEGQKGLQGREIRSGSQRLVTQD
EGWGLDRKQGPLGLGHHRGSEAPTVDPGDQVVGVARLQLRDVILSPELGV
VSTLDLTEVLDFWDVEDARTAAGMGGREGHRGRSGRSLRNPRRRRRQVSR
GSVGGESASGDHDRPLILGDRAIGALTVSLELVPAEGDSWTPNTSAATED
EHYSVPAVVEVLRDCGGRNQRGLGQHATIENRQEPGEVSQHVGFETRPVG
TATGTGGMIPTLDSTRQFWSHQSGAEVILASVPSHDKSAGGAQVDLGGTQ
RHKGDASDLSVIQEVKGGVSSGDRGAFGSRLVDAPRAVEQGEDLMGLLRE
AREVMSCEVVVGLECAVITSGGTSLEGVKVAYSCNQGLVHPSDRVVQHSA
RGKPILQRSLPSVEGTGGAVALPSSARSFALKHQIVTPAAVTQEVLHMWE
DAIQVFEVWGLPTSCELSFETEKEGVGTAGTAPGMRSGVCSEAQGNVLLG
LAKVRLSAFASFGKIMGGGTKATATTAADGPILITNPFSGLVVGELTVLL
LLREAVSSMLLSAGGEGEGAGAGAGAGTVTSHLEPLQGLKDQGLLEAGKA
PKENEEVEEETCEEGWKSKVDRHSEEGAVTKSSSAVPLTLPAYCPSVNDS
AEDLSRLLNPKRGEELDSHGQRPRSSPESEKPALGQERTSGEFLGLVRHV
VELSAVGKVPLGEGADADDPYGLTGCIVEYSLPGDQTCATSSREGHGDSD
LSNRSGNVNCSSLANTGHRAHTLWWDADSAILNSRTRHAVKVKALGGSMT
DLGLGSPSLSDQKGDWRGGITTAGDFDHGNEVHEGSGEGELGKLLDCIFG
PNNITFLIYWSAGDGTGDGAKMGAGLH
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