prot_C-tenellus_contig9955.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9955.1.1
Unique Nameprot_C-tenellus_contig9955.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length104
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9955.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 57..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 97..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9955contigC-tenellus_contig9955:3803..4114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9955.1.1mRNA_C-tenellus_contig9955.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9955 3728..4225 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9955.1.1 ID=prot_C-tenellus_contig9955.1.1|Name=mRNA_C-tenellus_contig9955.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=104bp
MPCQRLLTRTLFMFLWNCTRVMLDVYPAIHQYKHVMKYNLVAGVYLFFLC
ILLQQYPNPITSNFRAYVKGPTRSTFVLRVLKVCTSAAVVSSYVMCKPML
NTH*
back to top