prot_C-tenellus_contig9949.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9949.1.1
Unique Nameprot_C-tenellus_contig9949.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length86
Homology
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BLAST of mRNA_C-tenellus_contig9949.1.1 vs. uniprot
Match: A0A6H5KJI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI0_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 8.650e-5
Identity = 25/36 (69.44%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    1 DPFLAQLQARLAGTEHGLQESLGRRRALLSGFGHQG 36
            D FLA+LQARLAG +H L++SLGRR ALLS FG  G
Sbjct: 3488 DSFLARLQARLAGADHTLRQSLGRREALLSRFGTDG 3523
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9949.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJI0_9PHAE8.650e-569.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..86
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9949contigC-tenellus_contig9949:2988..3245 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9949.1.1mRNA_C-tenellus_contig9949.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9949 2988..3245 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9949.1.1 ID=prot_C-tenellus_contig9949.1.1|Name=mRNA_C-tenellus_contig9949.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=86bp
DPFLAQLQARLAGTEHGLQESLGRRRALLSGFGHQGGETGGEGSLGISEG
DELSSDIPSTSAAMSIASLSASSLSPPASARRRSGS
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