prot_C-tenellus_contig9941.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9941.1.1
Unique Nameprot_C-tenellus_contig9941.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length104
Homology
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BLAST of mRNA_C-tenellus_contig9941.1.1 vs. uniprot
Match: D7FMC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMC6_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 3.070e-24
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 0 
Query:    1 MKNRRTLDDAETFLAEGIYRSLKGGVRDVVAATDGLVETQEKLLTTMGGLLDDLRQYEIGEKAQDVNHGAEKIGQACLVLPRIRARVAALRERAQNLENDMTAD 104
            M   R+L+DAE  LAEGI+RSL GGV D++A TD L  TQ+ LL T  GLL++LR ++   +A  +   A+KI Q C  L R+  R+AALR RAQ LE ++ AD
Sbjct:    1 MSKARSLEDAEDMLAEGIFRSLIGGVTDMIATTDRLARTQDDLLATSRGLLEELRLHDTARQADAIEARADKIRQTCAALERVTDRLAALRRRAQVLEAELEAD 104
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BLAST of mRNA_C-tenellus_contig9941.1.1 vs. uniprot
Match: A0A6H5J974_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J974_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.850e-19
Identity = 45/95 (47.37%), Postives = 62/95 (65.26%), Query Frame = 0 
Query:   10 AETFLAEGIYRSLKGGVRDVVAATDGLVETQEKLLTTMGGLLDDLRQYEIGEKAQDVNHGAEKIGQACLVLPRIRARVAALRERAQNLENDMTAD 104
            AE    +GI+RSL GGV D++A TD L +TQ+ LL T  GLL++LR ++   +A  +   A+KI Q C  L R+  R+AALR RAQ LE ++ AD
Sbjct:    4 AEVARTQGIFRSLIGGVTDMIATTDSLAQTQDDLLATSRGLLEELRLHDTARQADAIETRADKIRQTCAALERVTDRLAALRRRAQVLEAELEAD 98
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9941.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMC6_ECTSI3.070e-2450.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J974_9PHAE1.850e-1947.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9941contigC-tenellus_contig9941:1509..2309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9941.1.1mRNA_C-tenellus_contig9941.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9941 1509..2309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9941.1.1 ID=prot_C-tenellus_contig9941.1.1|Name=mRNA_C-tenellus_contig9941.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=104bp
MKNRRTLDDAETFLAEGIYRSLKGGVRDVVAATDGLVETQEKLLTTMGGL
LDDLRQYEIGEKAQDVNHGAEKIGQACLVLPRIRARVAALRERAQNLEND
MTAD
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