prot_C-tenellus_contig9862.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9862.1.1
Unique Nameprot_C-tenellus_contig9862.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length117
Homology
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: D8LST0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST0_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 1.310e-47
Identity = 78/115 (67.83%), Postives = 89/115 (77.39%), Query Frame = 0
Query:    1 MATTLNKHIIHNAAWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEEASVLQRCL 115
            MATTLN+ I H A WHLIDA GQ        IVGRLAAQIAPI+RGKHKPTFCPN+DCGD VVVVNA  VEF+G KW  K+YRWH+G+PGGL+ER A DQ  RKPEE  +L+R +
Sbjct:    1 MATTLNRIINHKAKWHLIDASGQ--------IVGRLAAQIAPIIRGKHKPTFCPNDDCGDVVVVVNANAVEFTGNKWQKKVYRWHSGFPGGLKERPADDQLVRKPEE--ILRRAV 105          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A3F2S0U4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0U4_9STRA)

HSP 1 Score: 137 bits (345), Expect = 2.550e-39
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 0
Query:   15 WHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEE 107
            WH++DA+GQ        ++GRLA+Q+APILRGKHKPT+ PN DCGDYVVV+NAK +E +G KW +KLYRWHTG PGGL++R+A D  +RKPEE
Sbjct:   12 WHVVDAKGQ--------VLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIELTGNKWNNKLYRWHTGHPGGLKQRTAKDLFERKPEE 96          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: K3W736_GLOUD (Uncharacterized protein n=3 Tax=Oomycota TaxID=4762 RepID=K3W736_GLOUD)

HSP 1 Score: 137 bits (344), Expect = 3.210e-39
Identity = 60/94 (63.83%), Postives = 75/94 (79.79%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEE 107
            AWH++DA+GQ        ++GRLA+Q+APILRGKHKPTF PN DCGDYVVV+NAK +  +G KW +KLYRWHTG PGGL++RSA +  +RKPEE
Sbjct:   11 AWHVVDAKGQ--------VLGRLASQLAPILRGKHKPTFAPNVDCGDYVVVINAKDIVLTGNKWNNKLYRWHTGHPGGLKQRSAKELFERKPEE 96          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A7S4ABF1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ABF1_9STRA)

HSP 1 Score: 134 bits (338), Expect = 1.570e-38
Identity = 62/94 (65.96%), Postives = 73/94 (77.66%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEE 107
            AWHL+DA  Q         VGRLA QI+ IL+GKHKPTF PN+D GD+VVV+NA+ V+FSG+KW DKLYRWHTG+PGGL+ERSA D   RKPEE
Sbjct:   11 AWHLVDASNQT--------VGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHTGYPGGLKERSAKDMLARKPEE 96          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A7S4HN68_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HN68_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.380e-38
Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 0
Query:   15 WHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEEASVLQRCL 115
            WHLIDA  Q         VGRLAA +APILRGKHKPT+ PN DCGD+VV+VNA+ V FSG KW DKLYRWHTG+PGGL+ER A    +RKPE  SVLQ+ +
Sbjct:   12 WHLIDAADQT--------VGRLAATVAPILRGKHKPTYRPNADCGDFVVIVNAEKVHFSGNKWKDKLYRWHTGYPGGLKERPADMMLERKPE--SVLQKAI 102          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A2D4BZ50_PYTIN (Mitochondrial/chloroplast ribosomal protein L13 n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4BZ50_PYTIN)

HSP 1 Score: 133 bits (335), Expect = 7.940e-38
Identity = 60/101 (59.41%), Postives = 78/101 (77.23%), Query Frame = 0
Query:   15 WHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEEASVLQRCL 115
            WH++DA+GQ        ++GRLA+Q+APILRGKHKPT+ PN DCGDYVVV+NAK +  +G KW  KLYRWHTG PGGL++R+A +  +RKPEE  VL+R +
Sbjct:   14 WHVVDAKGQ--------VLGRLASQLAPILRGKHKPTYAPNVDCGDYVVVINAKDIVLTGDKWDQKLYRWHTGHPGGLKQRTAREMFERKPEE--VLRRAV 104          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A448Z8K8_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8K8_9STRA)

HSP 1 Score: 134 bits (338), Expect = 8.530e-38
Identity = 61/94 (64.89%), Postives = 74/94 (78.72%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEE 107
            AWHL+DA+ Q         VGRLA QI+ IL+GKHKPTF PN+D GD+VVV+NA+ V+FSG+KW DKLYRWH+G+PGGL+ERSA D   RKPEE
Sbjct:   11 AWHLVDAKNQT--------VGRLAGQISQILKGKHKPTFRPNKDMGDHVVVINAEKVQFSGKKWNDKLYRWHSGYPGGLKERSARDMMARKPEE 96          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A1E7F5Z3_9STRA (Ribosomal protein L13 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F5Z3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 1.980e-37
Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEEASVLQRCL 115
            AWHL+DA  Q         VGRLA QI+ IL+GKHKPTF PN+D GD+V+V+NA+ V FSG+KWTDK+YRWHTG+PGGL+ERSA +  +R+PEE  VL++ +
Sbjct:   11 AWHLVDASNQT--------VGRLAGQISQILKGKHKPTFRPNKDMGDHVIVINAEKVHFSGKKWTDKVYRWHTGYPGGLKERSAKEMMERRPEE--VLKKAI 102          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: H3G8X3_PHYRM (Uncharacterized protein n=24 Tax=Peronosporaceae TaxID=4777 RepID=H3G8X3_PHYRM)

HSP 1 Score: 132 bits (331), Expect = 3.030e-37
Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEE 107
            AWH++DA+GQ        ++GRLA+Q+APILRGKHKPT+ PN DCGD+VVV+NAK +  +G KW +KLYRWHTG PGGL++R+A +  +RKPE+
Sbjct:   11 AWHVVDAKGQ--------VLGRLASQLAPILRGKHKPTYAPNVDCGDFVVVINAKDIVLTGNKWNNKLYRWHTGHPGGLKQRTAKELFERKPED 96          
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Match: A0A7S2HZS3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HZS3_9STRA)

HSP 1 Score: 133 bits (334), Expect = 3.340e-37
Identity = 65/102 (63.73%), Postives = 76/102 (74.51%), Query Frame = 0
Query:   14 AWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKPTFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQRQRKPEEASVLQRCL 115
            AWHLIDA  Q         VGRLAA IAPIL+GKHKPT+ PN DCGD+VVV+NA  V FSG+KWTDKLYR HTG+PGGL+ R A D  QRKPE  S+L++ +
Sbjct:   11 AWHLIDASSQT--------VGRLAATIAPILKGKHKPTYRPNADCGDFVVVINADKVHFSGKKWTDKLYRHHTGYPGGLKSRRALDVLQRKPE--SILRKAV 102          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9862.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LST0_ECTSI1.310e-4767.83Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A3F2S0U4_9STRA2.550e-3963.44Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
K3W736_GLOUD3.210e-3963.83Uncharacterized protein n=3 Tax=Oomycota TaxID=476... [more]
A0A7S4ABF1_9STRA1.570e-3865.96Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S4HN68_9STRA7.380e-3864.36Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A2D4BZ50_PYTIN7.940e-3859.41Mitochondrial/chloroplast ribosomal protein L13 n=... [more]
A0A448Z8K8_9STRA8.530e-3864.89Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7F5Z3_9STRA1.980e-3759.80Ribosomal protein L13 n=1 Tax=Fragilariopsis cylin... [more]
H3G8X3_PHYRM3.030e-3759.57Uncharacterized protein n=24 Tax=Peronosporaceae T... [more]
A0A7S2HZS3_9STRA3.340e-3763.73Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005822Ribosomal protein L13PIRSFPIRSF002181RPL13p_RPL13Aa_RPL16e_RPL13ocoord: 1..113
e-value: 3.3E-31
score: 106.1
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 14..107
e-value: 2.2E-31
score: 108.4
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 8..107
IPR005822Ribosomal protein L13CDDcd00392Ribosomal_L13coord: 15..114
e-value: 8.33251E-45
score: 139.562
IPR005823Ribosomal protein L13, bacterial-typeTIGRFAMTIGR01066TIGR01066coord: 11..107
e-value: 1.3E-30
score: 104.1
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10Ribosomal protein L13coord: 1..114
e-value: 9.0E-38
score: 131.2
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 2..107
NoneNo IPR availablePANTHERPTHR11545:SF239S RIBOSOMAL PROTEIN L13, MITOCHONDRIALcoord: 8..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9862contigC-tenellus_contig9862:2790..3883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9862.1.1mRNA_C-tenellus_contig9862.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9862 2790..3883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9862.1.1 ID=prot_C-tenellus_contig9862.1.1|Name=mRNA_C-tenellus_contig9862.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=117bp
MATTLNKHIIHNAAWHLIDARGQARNTIILAIVGRLAAQIAPILRGKHKP
TFCPNEDCGDYVVVVNAKHVEFSGRKWTDKLYRWHTGWPGGLRERSAADQ
RQRKPEEASVLQRCLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005822Ribosomal_L13
IPR005823Ribosomal_L13_bac-type
IPR036899Ribosomal_L13_sf