prot_C-tenellus_contig9786.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9786.1.2
Unique Nameprot_C-tenellus_contig9786.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length107
Homology
[Close]
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Match: I0YK58_COCSC (EF-hand n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YK58_COCSC)

HSP 1 Score: 53.1 bits (126), Expect = 1.740e-6
Identity = 24/75 (32.00%), Postives = 44/75 (58.67%), Query Frame = 0 
Query:   28 VKDVFKQLDNNNDGRVDREEVREALQALVLPARAKDVDELFATFDLNQDGVILYDEFEALALHRRYGVSRVWEGV 102
            ++ +F  LD N DG++DR E++EALQ L LP     ++++F  +D++ DGV+   EF +    +   + R +  +
Sbjct:    8 IQSIFNNLDINRDGKLDRHELKEALQKLGLPPTDHYINDIFRQYDIDGDGVVHEREFRSYVQRKEAAMRRAFRSL 82
[Close]
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Match: A0A813AZT1_9DINO (Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AZT1_9DINO)

HSP 1 Score: 52.8 bits (125), Expect = 7.170e-6
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 0 
Query:   31 VFKQLDNNNDGRVDREEVREALQALVLPARAKDVDELFATFDLNQDGVILYDEF 84
            V + +D+N +G++DREE+R  L    L    K +D+LF TFDLN+DG I  DEF
Sbjct:   20 VLRVMDDNGNGKIDREELRSGLLDFGLDMTNKQLDKLFDTFDLNKDGQINMDEF 73
[Close]
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Match: A0A7S3XWU7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWU7_HETAK)

HSP 1 Score: 49.3 bits (116), Expect = 3.700e-5
Identity = 27/74 (36.49%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:   21 LEKFKVVVKDVFKQLDNNNDGRVDREEVREALQALVLPARAKDVDELFATFDLNQDGVILYDEFEA-LALHRRY 93
            ++ +++ +KD+F+Q+D N  G +D +E+R AL+ L LP     +  L A  D   DG++  DE EA L  +RR+
Sbjct:   24 MQHYQLRIKDLFRQVDTNQSGEIDAQELRAALRLLRLPLGDPQLFSLVAFLDAGGDGLVEGDELEAALRDYRRF 97
[Close]
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Match: S8BCR6_PENO1 (Mitochondrial thiamine pyrophosphate carrier 1 n=2 Tax=Penicillium TaxID=5073 RepID=S8BCR6_PENO1)

HSP 1 Score: 50.4 bits (119), Expect = 6.700e-5
Identity = 30/94 (31.91%), Postives = 48/94 (51.06%), Query Frame = 0 
Query:    3 LQRTFTASKDEPTDDAVDLEKFKVVVKD-------VFKQLDNNNDGRVDREEVREALQALVLPARAKDVDELFATFDLNQDGVILYDEFEALAL 89
            L RTF    D   D  +D  +F+  + +       +F+ +D NN+G +D+EE+R A     +   +  +DE FA  D N+DGV+ Y E+    L
Sbjct:   51 LLRTFLRDVDINRDGQIDYNEFRKFINNTETGLWQMFQHIDRNNNGVIDKEELRSAFAGSGVIVSSAKLDEFFAEVDKNEDGVLSYAEWRDFLL 144
[Close]
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Match: A0A152A889_9MYCE (EF-hand domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A889_9MYCE)

HSP 1 Score: 50.1 bits (118), Expect = 8.900e-5
Identity = 22/72 (30.56%), Postives = 42/72 (58.33%), Query Frame = 0 
Query:   28 VKDVFKQLDNNNDGRVDREEVREALQALVLPARAKDVDELFATFDLNQDGVILYDEFEALALHRRYGVSRVW 99
            +KD+FK+LD NNDGR+ + E+++    L +P+  + ++      D ++DG I + EFE    +    + +V+
Sbjct:    9 IKDLFKKLDVNNDGRLSKSEIKDGFFKLKIPSNDESINNFIQNVDDDKDGTISFSEFEKFTNNNLIQLKKVF 80
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9786.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
I0YK58_COCSC1.740e-632.00EF-hand n=1 Tax=Coccomyxa subellipsoidea (strain C... [more]
A0A813AZT1_9DINO7.170e-648.15Calmodulin n=1 Tax=Symbiodinium sp. KB8 TaxID=2309... [more]
A0A7S3XWU7_HETAK3.700e-536.49Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
S8BCR6_PENO16.700e-531.91Mitochondrial thiamine pyrophosphate carrier 1 n=2... [more]
A0A152A889_9MYCE8.900e-530.56EF-hand domain-containing protein n=1 Tax=Tieghemo... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 27..55
e-value: 2.0E-4
score: 30.7
coord: 63..91
e-value: 0.55
score: 19.3
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 27..87
e-value: 9.7E-15
score: 54.8
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 59..94
score: 10.413
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 23..58
score: 13.035
IPR002048EF-hand domainCDDcd00051EFhcoord: 28..84
e-value: 5.92901E-11
score: 51.3945
NoneNo IPR availableGENE3D1.10.238.10coord: 1..96
e-value: 2.3E-18
score: 68.5
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 36..48
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 21..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9786contigC-tenellus_contig9786:925..2460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9786.1.2mRNA_C-tenellus_contig9786.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9786 356..2579 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9786.1.2 ID=prot_C-tenellus_contig9786.1.2|Name=mRNA_C-tenellus_contig9786.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=107bp
MVLQRTFTASKDEPTDDAVDLEKFKVVVKDVFKQLDNNNDGRVDREEVRE
ALQALVLPARAKDVDELFATFDLNQDGVILYDEFEALALHRRYGVSRVWE
GVLYEE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair