prot_C-tenellus_contig9771.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9771.2.1
Unique Nameprot_C-tenellus_contig9771.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length90
Homology
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A6H5KX88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX88_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.030e-46
Identity = 82/90 (91.11%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 MENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            M++DFGLDRRL+KA AKMGFVYPTLVQ+KCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRKEAEP L RGVRAVVLVPTRELCEQ
Sbjct:   46 MQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLTRGVRAVVLVPTRELCEQ 135          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: D7FNE7_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNE7_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 5.250e-45
Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
Query:    1 MENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            M++DFGLDRRL+KA AKMGFVYPTLVQ+KCIPLAL+GKDLLVRARTGSGKTAAFALPLLQKILRRKEAEP L RGVRAVVLVPTRELC+Q
Sbjct:   48 MQHDFGLDRRLVKAVAKMGFVYPTLVQNKCIPLALRGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPGLPRGVRAVVLVPTRELCDQ 137          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A835ZDE1_9STRA (DEAD box helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 6.510e-44
Identity = 78/89 (87.64%), Postives = 84/89 (94.38%), Query Frame = 0
Query:    2 ENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            ++DFGLDRRLIKACAK GF+YPTLVQSKCIPLAL+GKDLLVRARTGSGKTAAF LPLLQK+L R+EAEPDLA  VRAVVLVPTRELCEQ
Sbjct:   15 QHDFGLDRRLIKACAKAGFIYPTLVQSKCIPLALKGKDLLVRARTGSGKTAAFGLPLLQKLLARREAEPDLAAAVRAVVLVPTRELCEQ 103          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A7S3H840_9STRA (ATP-dependent RNA helicase (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H840_9STRA)

HSP 1 Score: 123 bits (309), Expect = 6.110e-33
Identity = 55/90 (61.11%), Postives = 76/90 (84.44%), Query Frame = 0
Query:    1 MENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            M+ DFGLDRRL+KA +K+GF YPTLVQ+KCIP+ +QGKD+LVRA+TGSGKT AF+LP+LQKIL  KE++   ++ ++ ++L PT+EL +Q
Sbjct:   23 MQRDFGLDRRLVKALSKLGFTYPTLVQAKCIPIIVQGKDVLVRAKTGSGKTIAFSLPILQKILSGKESQSANSQSIKCIILAPTKELIKQ 112          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A482SEZ2_9ARCH (DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEZ2_9ARCH)

HSP 1 Score: 120 bits (301), Expect = 2.250e-31
Identity = 57/90 (63.33%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 MENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            ++N + LDRRL+KA +K+GF YPTLVQ+KC+PLAL+GKDL+VRARTGSGKT AFA+P +QKIL  K+A P    GV+ V+L PT+EL +Q
Sbjct:   54 LQNAYQLDRRLLKAISKLGFTYPTLVQAKCVPLALEGKDLMVRARTGSGKTLAFAIPAIQKILLNKDANPSQT-GVQCVILAPTKELIKQ 142          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: H3GBC9_PHYRM (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=H3GBC9_PHYRM)

HSP 1 Score: 124 bits (310), Expect = 5.000e-31
Identity = 66/89 (74.16%), Postives = 72/89 (80.90%), Query Frame = 0
Query:    2 ENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            E +FGLDRRL KA AKM FV+ TLVQ  CIPLALQGKDLLVRARTGSGKTAAFALPLL KIL+ K+  P     VRA+VLVPT+EL EQ
Sbjct:   19 ECEFGLDRRLTKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDPAVRALVLVPTKELVEQ 107          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A3M6VU95_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU95_9STRA)

HSP 1 Score: 123 bits (308), Expect = 9.470e-31
Identity = 65/87 (74.71%), Postives = 71/87 (81.61%), Query Frame = 0
Query:    4 DFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            +FGLDRRL KA AKM FV+ TLVQ  CIPLALQGKDLLVRARTGSGKTAAFALPLL KIL+ K+  P     VRA+VLVPT+EL EQ
Sbjct:   21 EFGLDRRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQHKQDAPASDSAVRALVLVPTKELVEQ 107          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: M4BKX7_HYAAE (Uncharacterized protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=M4BKX7_HYAAE)

HSP 1 Score: 122 bits (305), Expect = 2.460e-30
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
Query:    5 FGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            FGLDRRL KA AKM FV+ TLVQ  CIPLALQGKDLLVRARTGSGKTAAFALPLL KIL+ K  +   A  VRA+VLVPT+EL EQ
Sbjct:   22 FGLDRRLTKAVAKMQFVHATLVQLHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQTKVQDAAAAAAVRALVLVPTKELVEQ 107          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A397AWM6_9STRA (Helicase ATP-binding domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AWM6_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.690e-30
Identity = 59/87 (67.82%), Postives = 70/87 (80.46%), Query Frame = 0
Query:    4 DFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            DFGLD+RL KACAKM FV+ TLVQ  CIPLALQGKDLLVRARTGSGKTAAF LP+LQK+L      P   + ++A++LVPT+EL +Q
Sbjct:   20 DFGLDKRLSKACAKMQFVHATLVQKHCIPLALQGKDLLVRARTGSGKTAAFCLPVLQKLLAAHS--PTTKKSIKALILVPTKELVDQ 104          
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Match: A0A484DTQ8_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTQ8_BRELC)

HSP 1 Score: 121 bits (303), Expect = 4.520e-30
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 0
Query:    2 ENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGKTAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ 90
            E +FGLD RL KA AKM FV+ TLVQ  CIPLALQGKDLLVRARTGSGKTAAFALPLL KIL++K+  P     VRA+VLVPT+EL EQ
Sbjct:   19 ECEFGLDLRLSKAVAKMRFVHATLVQVHCIPLALQGKDLLVRARTGSGKTAAFALPLLHKILQQKKDTPVCEPAVRALVLVPTKELVEQ 107          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9771.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KX88_9PHAE4.030e-4691.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNE7_ECTSI5.250e-4590.00DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835ZDE1_9STRA6.510e-4487.64DEAD box helicase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S3H840_9STRA6.110e-3361.11ATP-dependent RNA helicase (Fragment) n=1 Tax=Spum... [more]
A0A482SEZ2_9ARCH2.250e-3163.33DEAD/DEAH box helicase n=1 Tax=archaeon TaxID=1906... [more]
H3GBC9_PHYRM5.000e-3174.16Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A3M6VU95_9STRA9.470e-3174.71Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4BKX7_HYAAE2.460e-3075.58Uncharacterized protein n=4 Tax=Peronosporaceae Ta... [more]
A0A397AWM6_9STRA3.690e-3067.82Helicase ATP-binding domain-containing protein (Fr... [more]
A0A484DTQ8_BRELC4.520e-3073.03Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..90
e-value: 5.5E-33
score: 116.1
NoneNo IPR availablePANTHERPTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDcoord: 4..90
NoneNo IPR availablePANTHERPTHR47959:SF1ATP-DEPENDENT RNA HELICASE RHLEcoord: 4..90
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 25..90
e-value: 3.3E-19
score: 69.3
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 1..28
score: 8.922
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 31..90
score: 12.93
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9771contigC-tenellus_contig9771:4368..5061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9771.2.1mRNA_C-tenellus_contig9771.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9771 4353..5061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9771.2.1 ID=prot_C-tenellus_contig9771.2.1|Name=mRNA_C-tenellus_contig9771.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=90bp
MENDFGLDRRLIKACAKMGFVYPTLVQSKCIPLALQGKDLLVRARTGSGK
TAAFALPLLQKILRRKEAEPDLARGVRAVVLVPTRELCEQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014014RNA_helicase_DEAD_Q_motif
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase