prot_C-tenellus_contig9768.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9768.3.1
Unique Nameprot_C-tenellus_contig9768.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length200
Homology
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A5E4G8E0_PRUDU (PREDICTED: Retrovirus-related Pol poly from transposon TNT (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4G8E0_PRUDU)

HSP 1 Score: 126 bits (316), Expect = 2.180e-32
Identity = 86/217 (39.63%), Postives = 123/217 (56.68%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPRVYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRGE--AEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI---RFG-----------------MATCNSSTTPADPHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAV 195
            KTK KSD S+ + KARLVA+G+TQ  G+D   TFAPV+++       L+KA+YGL+Q+PRAW+  L   L S+    S+ D  ++ + E  +++I+ +YV+D+ ITGSN   I   K  L Q+F +++LG  ++ LGI I   R G                 M        P D  +       LLS  D+ +YQ LVG L+YL+I TRPDI+HAV
Sbjct:   39 KTKFKSDGSLERHKARLVAKGFTQTFGVDYKETFAPVAKMNT-----LHKAIYGLKQSPRAWYAKLSSVLESVKFQRSSADSSLFVKDENGSKLIVLIYVDDIIITGSNLAEITKLKLFLHQKFAIKDLGSLKYFLGIEIAASRKGLFLNQRKYVLDLLKETRMMETKPIANPIDVKKKLGLDGELLS--DVGYYQRLVGKLIYLTI-TRPDIAHAV 247          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: Q25AL5_ORYSA (H0102C09.1 protein n=1 Tax=Oryza sativa TaxID=4530 RepID=Q25AL5_ORYSA)

HSP 1 Score: 124 bits (310), Expect = 3.520e-29
Identity = 80/221 (36.20%), Postives = 119/221 (53.85%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPRVYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHV--YTRGEAEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI--------------------RFGMATCNSSTTPADPHE-LSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQL 198
            K KRK+D S+ + KARLVA+G+ Q  GI+  +TF+PV          L+KALYGL+QAPRAW+  L   L  L   PS  D  +  Y++G+  I + +YV+D+ +  S  D      + L + F +++LG   + LGI                      R  M  C   +TP  P E LS H   +L P+D  +Y+++VG+L YL++ TRPDIS +V ++
Sbjct:  929 KIKRKADGSLDRYKARLVAKGFKQRYGINYEDTFSPV----------LDKALYGLKQAPRAWYSRLSTKLQELGFMPSKADTSLFFYSKGDVIIFVLIYVDDIIVASSMPDATTALLQDLNKSFALKDLGELHYFLGIEATKVCDGILLSQEKYVKDLLKRINMDKCKPVSTPLSPTEKLSIHQGDVLGPNDATNYRSIVGALQYLTL-TRPDISFSVNKV 1138          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A5E4GQ34_PRUDU (PREDICTED: Retrovirus-related Pol poly from (Fragment) n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A5E4GQ34_PRUDU)

HSP 1 Score: 115 bits (289), Expect = 1.950e-28
Identity = 83/217 (38.25%), Postives = 116/217 (53.46%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPRVYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRGEAEIILFV--YVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI--------------------RFGMATCNSSTTPADPHE-LSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHA 194
            KTK   D S+ K KA LVA+GY+Q PGID + TFAPV+RL       L KALYGL+QAPRAW++ ++          S  +  +YT+     IL V  YV+D+  TGS+ +++   K  + +Q+EM +LG     LG+ +                    +FG+  C S  TP   +E LS    S L+   +  Y+ +VGSLLYL+  TRPDI  A
Sbjct:   36 KTKLNLDGSVQKNKAWLVAKGYSQKPGIDFNETFAPVARLDT-----LKKALYGLKQAPRAWYEEINSYFIKTGFYRSPSEATLYTKMSTSGILIVSLYVDDIIYTGSSKEMMAAFKNDMMRQYEMTDLGLLHHFLGLGVLQIDTCIFLYQKKYAKTLLDKFGLKDCKSVATPLAVNEKLSKVDGSELADETL--YRQMVGSLLYLT-ATRPDIMFA 244          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: UPI001036A24C (putative disease resistance protein RGA4 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036A24C)

HSP 1 Score: 120 bits (302), Expect = 4.040e-28
Identity = 81/225 (36.00%), Postives = 116/225 (51.56%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLP----RVYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRGEAEIILFV--YVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI--------------------RFGMATCNSSTTPADPHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            +TK  +D+SI K KARLV +GY QI G D   TFAP     +     +VY L KALY L+QAP+AW+  +   L SL  T S  +  +Y + +   +L V  YV+D+ +TG NA +I   K+ + Q FEM +LG   + LG+ +                    +F M  C +  TP    E  +  E   S  D  +Y++L+G L+YL+  TRPDI   V  L+
Sbjct:  948 RTKLNADNSINKHKARLVVKGYAQIFGADYSETFAPPEGFVVQGEEDKVYLLKKALYSLKQAPKAWYSRIDEHLLSLGFTKSLSEATLYVKQKGSYVLIVSLYVDDLLVTGDNAQMIEEFKQEMMQVFEMTDLGLMTYFLGLEVQQSQNEVFICQKKYAKEILKKFQMEECKAINTPMGQKEKLSK-EDGASKVDEGYYRSLIGCLMYLT-ATRPDILFVVSLLS 1170          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A8J6HPC5_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HPC5_TENMO)

HSP 1 Score: 119 bits (299), Expect = 9.980e-28
Identity = 88/267 (32.96%), Postives = 124/267 (46.44%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPRVY--------------------------------------CL-NKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRGEAE--IILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI----------------------RFGMATCNSSTTPADPHE-----LSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            +TK K D S+ +RKARLVA+ +TQ PGID + TFAPV+RLG  R++                                      CL  KALYGL+Q+ R  ++ L   L    L P   DP VY   E    +I+ +YV+D+ +   N   +   K  L + FEM++LG   + LGI                        RF M  C   TTP + +E     +    E    P ++  +Q+LVGSL+YL++ TRPDI+HAV  L+
Sbjct:  676 RTKFKKDGSVDRRKARLVAKDFTQKPGIDFNETFAPVARLGSIRLFMAIAVELGLQVHQLDFTSAYLNGEIEEEVFMEVPRNKVCLIRKALYGLKQSGRQGYKKLDEKLKQQKLKPLNSDPCVYINKEDGNIVIVVIYVDDLMVASDNPKKLQRLKLELSKSFEMKDLGPLSFCLGIEFTQNVEKQTITMSQSKYIKEILSRFNMENCKGVTTPINLNEKLSKEMCPKTEEEKKPVELLPHQSLVGSLMYLAVSTRPDIAHAVSMLS 942          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A6H5KRT7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT7_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.520e-27
Identity = 68/181 (37.57%), Postives = 99/181 (54.70%), Query Frame = 0
Query:   45 VYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDP--HVYTRGEAEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI----------------------RFGMATCNSSTTPADPHELSTHP--ESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            VY L ++LYGL Q+P  W  TL  +LT      +  DP  +VYT G   +IL VYV+D+ ITG +  L++  K+ L  +FEM ++G  + ILGI +                      RFGM   N  +TP    E+ T    + +L P D+K YQ++ GS+LYL+ CTR D+S+A +QL+
Sbjct:    2 VYKLERSLYGLSQSPALWSDTLDKSLTVFGWKRTQSDPCVYVYTSGNIIVILTVYVDDILITGRDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNALLERFGMQEANPVSTPGYGAEIYTDQPQDQILGPTDMKIYQSMTGSILYLAQCTRFDLSYAALQLS 182          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A1P8YYM3_MAIZE (Reverse transcriptase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1P8YYM3_MAIZE)

HSP 1 Score: 118 bits (295), Expect = 3.560e-27
Identity = 88/268 (32.84%), Postives = 128/268 (47.76%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPR-----------------------------------------------VYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRG--EAEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRI--------------------RFGMATCNSSTTPADPHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            K KR  +D+I+K KARLVA+GY Q PG+D    FAPV+R    R                                               V  L+KALYGL+QAPRAW+Q L   L +L       +  +YTRG  EA +I+ VYV+D+ ITG +A  +   K ++Q+ F+M +LG   + LG+ +                    + G+A CN+S TP +P +L    E      D+  Y++L+GSL YL   +RPD+++ V  L+
Sbjct: 1152 KVKRDENDNIVKYKARLVAKGYVQQPGVDFDEVFAPVARQESVRLLLAIAAHYGWGVHHMDVKSAFLNGELQEEVYVQQPPGFVDERHKYKVLRLHKALYGLRQAPRAWNQKLDAELLALGFARCVNEHGMYTRGKGEARLIVGVYVDDLIITGGDAGAVAKFKVQMQKIFKMSDLGLLSYYLGLEVTQGAQGITLRQSAYATKVLEKAGLAGCNASATPMEP-KLKLLKEGTTPSVDVTEYRSLIGSLRYLCN-SRPDLAYPVGYLS 1417          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A6S7JPX1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=10 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JPX1_PARCT)

HSP 1 Score: 117 bits (292), Expect = 8.800e-27
Identity = 84/263 (31.94%), Postives = 118/263 (44.87%), Query Frame = 0
Query:   14 KARLVARGYTQIPGIDVHNTFAPVSRLGLPRVYC-------------------------------------------------LNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTR---GEAE--IILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRIR--------------------FGMATCNSSTTPAD---PHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            KAR VA+GY+Q+PG+D H TFAP +RL   RV                                                   LNK+LYGL+Q+ R W+ TLH+ L       S  DP VY R   G+A   IIL ++V+D+ I+ SN+DL+ T K  L ++F+M++LG   W LG   +                    FGM  C   TTP+       +      L  P+    Y+ +VGSL+Y+   TRPD+ H V +L+
Sbjct:  862 KARYVAKGYSQVPGVDYHETFAPTARLSSIRVLMQHAVQNDMIVHQMDVKAAYLNATIDCDIFVEQPKGYEKVGGNGKKLVCKLNKSLYGLKQSGRNWNATLHNYLVKEGFMQSQADPCVYHRFVDGDASKCIILIIWVDDLLISASNSDLLQTVKGNLSERFKMKDLGVLHWFLGTEFKCSDGMIEMNQTRYIEKVLEKFGMNNCKPKTTPSVLGFDKVIDMESPVLEDPNS---YRQIVGSLIYVMTGTRPDLCHIVTKLS 1121          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A2K3LSQ2_TRIPR (Putative copia-type protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LSQ2_TRIPR)

HSP 1 Score: 114 bits (284), Expect = 9.960e-27
Identity = 80/221 (36.20%), Postives = 119/221 (53.85%), Query Frame = 0
Query:    1 KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLG-----LPRVYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTR--GEAEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRIRFG-----------------MATCNSSTTPADPHELSTH--PESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAV 195
            K K KSD S+ + KARLVA+G++Q  G+D   TFA V+++      +     L KALYG++QAPRAW +     + SL    S  D  ++ R      I+L +YV+DM ITG + + I+  K +L + FEM++LG   + LGI + +                   A  + + +   PHEL+    P   +   D   Y+TLVGSL+YL+I TRPDI++ V
Sbjct:   90 KIKTKSDGSVERYKARLVAKGFSQQYGMDYEETFAHVAKMTTICTLIVVASVLKKALYGMKQAPRAWFEKFSTVIPSLGFRSSDHDSALFLRTSSHGRILLSLYVDDMIITGDDVNGIDELKLQLAKFFEMKDLGTLRYCLGIEVAYSPRGYLLSQSKYIANILEQARISDTRSTDSPHELNVKYAPSDGVLLSDPTFYRTLVGSLVYLTI-TRPDIAYEV 309          
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Match: A0A2G8RPZ2_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RPZ2_9APHY)

HSP 1 Score: 113 bits (282), Expect = 2.290e-26
Identity = 64/159 (40.25%), Postives = 91/159 (57.23%), Query Frame = 0
Query:   45 VYCLNKALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYT----RGEAEIILFVYVNDMGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRIRFGMATCNSSTTPADPHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT 199
            V  L KA+YGL+QA R W+  +H +L  L  T +  D  VY     RG +  I+ +YV+D+ + G + + I T KR L +Q++M +LG  E+I  +  RF MA CN S TP     +    +   S  D K YQ+L+GSL+Y  + TRPDIS AV  L+
Sbjct:   33 VCLLKKAIYGLKQASRQWNVKIHQSLLDLGFTRTYSDAGVYVYRQQRGNSITIVVLYVDDLLLFGDDKNHIKTVKRTLSRQYKMTDLGAEEYIQSVLERFQMADCNPSNTPLPSGAVLVSYDGTASDADRKRYQSLIGSLMYAMLGTRPDISFAVTHLS 191          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9768.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E4G8E0_PRUDU2.180e-3239.63PREDICTED: Retrovirus-related Pol poly from transp... [more]
Q25AL5_ORYSA3.520e-2936.20H0102C09.1 protein n=1 Tax=Oryza sativa TaxID=4530... [more]
A0A5E4GQ34_PRUDU1.950e-2838.25PREDICTED: Retrovirus-related Pol poly from (Fragm... [more]
UPI001036A24C4.040e-2836.00putative disease resistance protein RGA4 n=1 Tax=C... [more]
A0A8J6HPC5_TENMO9.980e-2832.96Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KRT7_9PHAE1.520e-2737.57Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1P8YYM3_MAIZE3.560e-2732.84Reverse transcriptase n=1 Tax=Zea mays TaxID=4577 ... [more]
A0A6S7JPX1_PARCT8.800e-2731.94Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2K3LSQ2_TRIPR9.960e-2736.20Putative copia-type protein n=1 Tax=Trifolium prat... [more]
A0A2G8RPZ2_9APHY2.290e-2640.25Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..139
e-value: 4.4E-23
score: 82.1
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 45..139
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 9..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9768contigC-tenellus_contig9768:4387..5198 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9768.3.1mRNA_C-tenellus_contig9768.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9768 3866..5198 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9768.3.1 ID=prot_C-tenellus_contig9768.3.1|Name=mRNA_C-tenellus_contig9768.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=200bp
KTKRKSDDSILKRKARLVARGYTQIPGIDVHNTFAPVSRLGLPRVYCLNK
ALYGLQQAPRAWHQTLHHTLTSLHLTPSAVDPHVYTRGEAEIILFVYVND
MGITGSNADLINTTKRRLQQQFEMEELGRAEWILGIRIRFGMATCNSSTT
PADPHELSTHPESLLSPHDIKHYQTLVGSLLYLSICTRPDISHAVMQLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR043502DNA/RNA_pol_sf