prot_C-tenellus_contig9753.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9753.1.1
Unique Nameprot_C-tenellus_contig9753.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length157
Homology
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Match: D8LSJ9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ9_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 5.860e-38
Identity = 74/112 (66.07%), Postives = 90/112 (80.36%), Query Frame = 0
Query:   49 EVAAEVTAE---NPIQKLQQLLTKAKERGMSAEELFEHFAPVGKARTSITPAMFETALQKLGKEAFQFNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPWKAERARR 157
            E AA V A    +P++KLQ LLTKAKERGMSAE LFEHFAP G+A  S+TP MFE+AL+KLG+ AF  + +ELEH+V  FD+D NGT+E+ EFM FCLSIPSLPW+AE+ARR
Sbjct:   97 EAAAAVEAAGDVSPVEKLQVLLTKAKERGMSAERLFEHFAPGGEA--SVTPLMFESALRKLGQRAFDLDEMELEHLVTVFDTDGNGTVELDEFMTFCLSIPSLPWRAEKARR 206          
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Match: A0A835YNE5_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNE5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.790e-25
Identity = 64/128 (50.00%), Postives = 85/128 (66.41%), Query Frame = 0
Query:   37 GIKDVAKEVLMQEVAAEVTAEN-------PIQKLQQLLTKAKERGMSAEELFEHFAPVGKARTSITPAMFETALQKLGKEAFQFNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPWKAERARR 157
            G+ D  + V+M  +    TAE        P++KLQ LLT AKERGMSAE LFE FAP G A  ++T   FE AL++L  + F  ++ EL+ ++  FD++ NG IE+ EFMEFC++IPSL WKAERARR
Sbjct:    4 GVTDSVRAVVMTALN---TAEGEGQLKGTPLEKLQALLTAAKERGMSAERLFEFFAPAGSA--TMTADDFERALRELSPQHFPLSAAELDELMAHFDANRNGRIELSEFMEFCMAIPSLAWKAERARR 126          
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Match: W7TW51_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TW51_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.050e-8
Identity = 31/96 (32.29%), Postives = 55/96 (57.29%), Query Frame = 0
Query:   62 KLQQLLTKAKERGMSAEELFEHFAPVGKARTSITPAMFETALQKLGKEAFQFNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPWKAERARR 157
            KLQ++  +AKE GM+ +++F+ F    +  ++I+   F  AL+KL  + F     ++  +V  F+ +E+  + + E   F L+IP + WK ER RR
Sbjct:   82 KLQEIFIRAKESGMTYDDIFKKFCLKHEVTSTISSKAFVAALRKLSPDIFCLTETDVGLLVRKFEVNEDKVVSLDELKTFALAIPHVSWKVERIRR 177          
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Match: A0A7S2BJX7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BJX7_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.320e-7
Identity = 36/98 (36.73%), Postives = 51/98 (52.04%), Query Frame = 0
Query:   60 IQKLQQLLTKAKERGMSAEELFEHFAPVGKARTSITPAMFETALQKLGKEAFQ-FNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPWKAERAR 156
            I+K+  ++TKAKE GMS +++F  F       + I P  F+  L  LG    +     EL  +    D D  GTI++ EF   C +IP L WKAE+ R
Sbjct:   21 IKKMWTVMTKAKESGMSVDQIFTFFKS-SSGGSEIGPLDFQEGLAALGPAITKTITEDELSEIFQDLDDDGGGTIDVDEFKAHCYNIPRLAWKAEKIR 117          
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Match: D7G5R3_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5R3_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 3.970e-6
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   94 ITPAMFETALQKLGKEAFQFNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPWKAERARR 157
            IT A F+  L  LG   F  ++ E   + +  D++ +G+I++ EF  FCL IPS+ WKAERARR
Sbjct:  297 ITSASFQHGLATLG---FNISTEETAKMFDQLDANGDGSIDLAEFTRFCLEIPSMTWKAERARR 357          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9753.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSJ9_ECTSI5.860e-3866.07EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YNE5_9STRA1.790e-2550.00EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
W7TW51_9STRA5.050e-832.29Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S2BJX7_9STRA2.320e-736.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D7G5R3_ECTSI3.970e-643.75EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..80
NoneNo IPR availableGENE3D1.10.238.10coord: 46..155
e-value: 9.2E-8
score: 34.0
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 126..138
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 113..148
score: 8.962
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 77..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9753contigC-tenellus_contig9753:4136..5459 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9753.1.1mRNA_C-tenellus_contig9753.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9753 4136..5459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9753.1.1 ID=prot_C-tenellus_contig9753.1.1|Name=mRNA_C-tenellus_contig9753.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=157bp
HGQGHKPTEDELIEKSARARSARRRSSLLQMGVANAGIKDVAKEVLMQEV
AAEVTAENPIQKLQQLLTKAKERGMSAEELFEHFAPVGKARTSITPAMFE
TALQKLGKEAFQFNSLELEHVVNTFDSDENGTIEMCEFMEFCLSIPSLPW
KAERARR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair