prot_C-tenellus_contig9719.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9719.2.1
Unique Nameprot_C-tenellus_contig9719.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length176
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9719.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 96..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 77..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..29
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..76
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..175
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9719contigC-tenellus_contig9719:778..1305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9719.2.1mRNA_C-tenellus_contig9719.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9719 607..1305 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9719.2.1 ID=prot_C-tenellus_contig9719.2.1|Name=mRNA_C-tenellus_contig9719.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=176bp
MEGIARHRNEPLKITYCTSSILVIVVLLIPTHPLISDTSLQGLEFAEQRS
FFNEARRLVLLTQSAMFFLLGVWQSLHLDGGLASFIGADKWPSSTGLAVA
LGLYQCGLFTSIFVFFGCNRTVHTGIKFTGVQSLVVLMYLLKRIAMGTGL
GLYQSVVIAWLCGMIGLCSYYGRQL*
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