prot_C-tenellus_contig9695.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9695.1.2
Unique Nameprot_C-tenellus_contig9695.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length72
Homology
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BLAST of mRNA_C-tenellus_contig9695.1.2 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 4.820e-23
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = 0 
Query:    1 MYGEVGAASYPVDVLSWDSVSGRASLRVLESTIVPVHAALTLVGSYEGLPCAMTVLGISPFLAGLACERFL 71
            ++GEVG+ +YPVDVLSWD+VSG   LRV   ++VP+ AAL+ VGS   +PCA+ V  +SPFLAGLACER+L
Sbjct:   79 LHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149
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BLAST of mRNA_C-tenellus_contig9695.1.2 vs. uniprot
Match: UPI00145A102D (ribonuclease P protein subunit p14-like isoform X1 n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI00145A102D)

HSP 1 Score: 60.5 bits (145), Expect = 9.090e-10
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 0 
Query:    1 MYGEVGAASYPVDVLSWDSVSGRASLRVLESTIVPVHAALTLVGSYEGLPCAMTVLGISPFLAGLA 66
            +YGE+GAA  P DVL ++  +  A LRV  S +V + +ALTL+G Y+G PC + V+ ++PFL  L+
Sbjct:   80 LYGEIGAA-LPFDVLKFEENTLSAVLRVYSSALVRLWSALTLLGGYQGQPCGVRVVQVTPFLLALS 144
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BLAST of mRNA_C-tenellus_contig9695.1.2 vs. uniprot
Match: A0A8J5B2R9_9DIPT (Uncharacterized protein n=1 Tax=Bradysia odoriphaga TaxID=1564500 RepID=A0A8J5B2R9_9DIPT)

HSP 1 Score: 50.1 bits (118), Expect = 3.860e-6
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:    1 MYGEVGAASYPVDVLSWDSVSGRASLRVLESTIVPVHAALTLVGSYEGLPCAMTVLGISPFLAGL 65
            ++GE+G  +  VD+L +D  + RA LRV  S  V + AALTL+ S++ +PC + V   SP L  L
Sbjct:   36 VFGEIGGHT-TVDILKFDQNNQRAILRVPSSYYVKLRAALTLISSFQEIPCCIKVNTASPVLLSL 99
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9695.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LNR1_ECTSI4.820e-2360.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI00145A102D9.090e-1045.45ribonuclease P protein subunit p14-like isoform X1... [more]
A0A8J5B2R9_9DIPT3.860e-641.54Uncharacterized protein n=1 Tax=Bradysia odoriphag... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilyGENE3D3.30.70.3250Ribonuclease P, Pop5 subunitcoord: 1..71
e-value: 1.3E-6
score: 30.5
IPR038085RNase P subunit Pop5/Rpp14/Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 1..64
NoneNo IPR availablePANTHERPTHR15441RIBONUCLEASE P PROTEIN SUBUNIT P14coord: 1..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9695contigC-tenellus_contig9695:3093..3715 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9695.1.2mRNA_C-tenellus_contig9695.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig9695 2747..4495 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9695.1.2 ID=prot_C-tenellus_contig9695.1.2|Name=mRNA_C-tenellus_contig9695.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=72bp
MYGEVGAASYPVDVLSWDSVSGRASLRVLESTIVPVHAALTLVGSYEGLP
CAMTVLGISPFLAGLACERFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038085Rnp2-like_sf