prot_C-tenellus_contig9668.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9668.2.1
Unique Nameprot_C-tenellus_contig9668.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length140
Homology
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 110 bits (274), Expect = 2.910e-25
Identity = 59/135 (43.70%), Postives = 75/135 (55.56%), Query Frame = 0
Query:    1 MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 133
            +L R  HHG++ A  K   +TT     GK+Y+   + HD   L GL +LR  E   ELMQFLQAVNWL+  LP MSE V PL   LE  +AG   ++KRVAS   I    W+   +  W  AQ M++  V L HP
Sbjct:  832 ILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHP 966          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.810e-25
Identity = 58/128 (45.31%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    1 MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQ 126
            +L RL   GI+AA    L F T+    GK+Y+G  V HDP  LQGL D+R  E   ELMQ LQAVNWL+  LP ++E VEPL  LLE  +A    ++KR+AS   I    W+      WT+AQ ++ Q
Sbjct:  642 ILRRLEDKGIFAAAHMCLFFDTKIKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVPQ 769          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 3.980e-25
Identity = 60/135 (44.44%), Postives = 76/135 (56.30%), Query Frame = 0
Query:    1 MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 133
            +L RL   G+Y A  K   F T  T  GK+Y+   V HDP  L GL  +R  E   ELMQFLQAVNWL+  LP M+E V PL   LE+ L G K ++KRVA    I     +   +  WT AQ ++++ V LSHP
Sbjct:  930 ILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHP 1064          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 1.050e-22
Identity = 55/136 (40.44%), Postives = 78/136 (57.35%), Query Frame = 0
Query:    1 MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHPR 134
            +L RL  +GI+AA  K   F T+    GK+Y+G  V  DP  LQGL D+R  E   +LMQFLQAV WL+  L  ++E +EP+  LLE  +A    Q+K +A    I    W+   +  W +AQ +++  V LSHP+
Sbjct:  583 ILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPK 718          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE2.910e-2543.70Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E0_9PHAE3.810e-2545.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE3.980e-2544.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE1.050e-2240.44CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9668contigC-tenellus_contig9668:4582..5001 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9668.2.1mRNA_C-tenellus_contig9668.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9668 4240..5001 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9668.2.1 ID=prot_C-tenellus_contig9668.2.1|Name=mRNA_C-tenellus_contig9668.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp
MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLR
SFEIVRELMQFLQAVNWLKIHLPHMSETVEPLLLERRLAGVKCQSKRVAS
THPIHGGDWSLEQLAVWTTAQKMISQVVELSHPRRSVLC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043502DNA/RNA_pol_sf