mRNA_C-tenellus_contig9668.2.1 (mRNA) Choristocarpus tenellus KU2346

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-tenellus_contig9668.2.1
Unique NamemRNA_C-tenellus_contig9668.2.1
TypemRNA
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Homology
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 9.720e-60
Identity = 114/250 (45.60%), Postives = 149/250 (59.60%), Query Frame = 1
Query:    1 AVNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYTVRGED-LFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            AVN + E  P PMP+LE  M +L  A C+  LD+ +GYW  PL+   QEI+T+ G   L+SP  VPQG LNATS+ Q  M+ +L  L+   C++WVDDI+ WG   +DL+N LD +L R  HHG++ A  K   +TT     GK+Y+   + HD   L GL +LR  E   ELMQFLQAVNWL+  LP MSE V PL   LE  +AG   ++KRVAS   I    W+   +  W  AQ M++  V L HP
Sbjct:  720 AVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHP 966          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 7.180e-58
Identity = 111/249 (44.58%), Postives = 151/249 (60.64%), Query Frame = 1
Query:    7 NSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYTVRG-EDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHPR 744
            N + E  P  +P+ E  +  LQGA CF KLDL +GYWQ PL+E  +EI+++   E LF PT VPQ  LNAT + QA M+++L GL+   C +WVDD I WG D  DL+N LD +L RL  +GI+AA  K   F T+    GK+Y+G  V  DP  LQGL D+R  E   +LMQFLQAV WL+  L  ++E +EP+  LLE  +A    Q+K +A    I    W+   +  W +AQ +++  V LSHP+
Sbjct:  473 NLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPK 718          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 4.690e-57
Identity = 111/250 (44.40%), Postives = 148/250 (59.20%), Query Frame = 1
Query:    1 AVNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYTVRGED-LFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            A N + E  P  MPN E  + +L  A  +  LDL + YWQ PL+   QEI+T+     L++P  VPQG LNATS+ QA ++++L GL+   C +WVDD++ WG D DDL++ LD +L RL   G+Y A  K   F T  T  GK+Y+   V HDP  L GL  +R  E   ELMQFLQAVNWL+  LP M+E V PL   LE+ L G K ++KRVA    I     +   +  WT AQ ++++ V LSHP
Sbjct:  818 AANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHP 1064          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 149 bits (376), Expect = 2.650e-37
Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 1
Query:  202 ALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQ 720
            A+      +A M+++L GL+   CM+WVDD++ WG D  DL N LD +L RL   GI+AA    L F T+    GK+Y+G  V HDP  LQGL D+R  E   ELMQ LQAVNWL+  LP ++E VEPL  LLE  +A    ++KR+AS   I    W+      WT+AQ ++ Q
Sbjct:  598 AMAVPKRGRAVMTEILQGLN---CMVWVDDVVWWGIDETDLPNALDEILRRLEDKGIFAAAHMCLFFDTKIKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVNWLRTSLPRLAEVVEPLRRLLEEHMASAPRRTKRIASNRAIKSEAWTAGMAKAWTSAQDLVPQ 769          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 149 bits (375), Expect = 3.740e-37
Identity = 82/249 (32.93%), Postives = 134/249 (53.82%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RTEA P+PMP LE ++  L+GA  F  LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++   L     ++W+DDI+ +    ++L+  LD +L R   +G+     K   F  E    GK+ +   VRH P  +QGL++++  +   +L QFL AVNW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     + ++ ++V L+HP
Sbjct:  518 VNERTEAMPWPMPVLEVVLSALEGAQVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLHAVLEEAMKAAGSRKKVKLAKFPLDKIGWGDPQLADLAAVKAVLLEMVPLAHP 766          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6A3GM82_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3GM82_9STRA)

HSP 1 Score: 139 bits (351), Expect = 4.050e-35
Identity = 80/249 (32.13%), Postives = 129/249 (51.81%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RTE+ P+PMP LE ++  L+GA     LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++   L     + W+DDI+ +    D+L+  LD +L R   +G+     K   F  E    GK  +   VRH    +QGL++++  +   +L QFL AVNW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     +  + ++V L+HP
Sbjct:  159 VNERTESMPWPMPVLEVVLGALEGAKVVFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDLLGNGILAWLDDILGYAESEDELLQLLDQVLARCEVYGLKLHAKKCEFFEIEVKWCGKTVSAAGVRHCSDRVQGLVEMQPPQTAGDLQQFLCAVNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHP 407          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6G0MLJ8_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MLJ8_9STRA)

HSP 1 Score: 142 bits (358), Expect = 7.060e-35
Identity = 81/249 (32.53%), Postives = 130/249 (52.21%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RTEA P+PMP LE ++  L+GA  F  LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++         + W+DDI+ +    D+L+  LD +L R   +G+     K   F  E    GK+ +   VRH P   QGL++++  +   +L QFL A+NW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     +  + ++V L+HP
Sbjct:  426 VNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHP 674          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6A3VHD7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3VHD7_9STRA)

HSP 1 Score: 139 bits (351), Expect = 7.310e-35
Identity = 80/249 (32.13%), Postives = 130/249 (52.21%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RT+A P+PMP LE ++  L+GA  F  LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++         + W+DDI+ +    D+L+  LD +L R   +G+     K   F  E    GK+ +   VRH P   QGL++++  +   +L QFL A+NW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     +  + ++V L+HP
Sbjct:    8 VNERTKAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLVRCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMKTAGSRKKVKLAKFPLDQISWGDPQLADLAAVKAALLKMVPLAHP 256          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6A3Q7S3_9STRA (Uncharacterized protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q7S3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.390e-34
Identity = 80/249 (32.13%), Postives = 130/249 (52.21%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RTEA P+PMP LE ++  L+GA  F  LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++         + W+DDI+ +    D+L+  LD +L R   +G+     K   F  +    GK+ +   VRH P   QGL++++  +   +L QFL A+NW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     +  + ++V L+HP
Sbjct:  561 VNERTEAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLARCEAYGLKLHAKKCEFFEIDVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTSGLYAVLEEAMKAAGSRKKVKLAKFPLDQIGWGDPQLADLAAVKAALLKMVPLAHP 809          
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Match: A0A6G0JR09_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JR09_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.670e-34
Identity = 80/249 (32.13%), Postives = 130/249 (52.21%), Query Frame = 1
Query:    4 VNSRTEACPFPMPNLEPMMVKLQGAACFAKLDLFKGYWQFPLSELGQEIYT-VRGEDLFSPTCVPQGALNATSHSQAQMSQVLTGLSHTICMLWVDDIILWG*DADDLVNNLDPMLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLRSFEIVRELMQFLQAVNWLKIHLPHMSETVEPL--LLERRLAGVKCQSKRVASTHPIHGGDWSLEQLAVWTTAQKMISQVVELSHP 741
            VN RT+A P+PMP LE ++  L+GA  F  LD F+GYWQ PL E  QE++T +    +++PT VP GA +A ++ Q  + ++         + W+DDI+ +    D+L+  LD +L R   +G+     K   F  E    GK+ +   VRH P   QGL++++  +   +L QFL A+NW++  +P  +     L  +LE  +     + K   +  P+    W   QLA     +  + ++V L+HP
Sbjct:    8 VNERTKAMPWPMPVLEVVLGALEGAKVFFALDWFRGYWQLPLHEDSQELFTFITHRGMYTPTRVPMGATDAVAYCQGVVEEIFGDRLGNGILAWLDDILGYAESEDELLQLLDQVLVRCEAYGLKLHAKKCEFFEIEVKWCGKMVSAAGVRHCPDRGQGLVEMQPPQTAGDLQQFLCAMNWMRQSIPEYNRLTAGLYAVLEEAMKTAGSRKKVKLAKFPLDQISWGDPQLADLAAVKAALLKMVPLAHP 256          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9668.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE9.720e-6045.60Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE7.180e-5844.58CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K5A5_9PHAE4.690e-5744.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E0_9PHAE2.650e-3744.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4WWJ1_9STRA3.740e-3732.93Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A6A3GM82_9STRA4.050e-3532.13Reverse transcriptase domain-containing protein (F... [more]
A0A6G0MLJ8_9STRA7.060e-3532.53Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3VHD7_9STRA7.310e-3532.13Reverse transcriptase domain-containing protein n=... [more]
A0A6A3Q7S3_9STRA1.390e-3432.13Uncharacterized protein n=6 Tax=Phytophthora fraga... [more]
A0A6G0JR09_9STRA3.670e-3432.13Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9668contigC-tenellus_contig9668:4240..5001 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog164328.Phyra85588
PFAMsRVT_1,rve
Model size762
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.72e-08
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QEWS@4776|Peronosporales
Descriptiontransposition, RNA-mediated
Cds size420
COG categoryL
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790194.6905465-UTR-C-tenellus_contig9668:4239..45811680790194.6905465-UTR-C-tenellus_contig9668:4239..4581Choristocarpus tenellus KU2346UTRC-tenellus_contig9668 4240..4581 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680790194.7112877-CDS-C-tenellus_contig9668:4581..50011680790194.7112877-CDS-C-tenellus_contig9668:4581..5001Choristocarpus tenellus KU2346CDSC-tenellus_contig9668 4582..5001 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9668.2.1prot_C-tenellus_contig9668.2.1Choristocarpus tenellus KU2346polypeptideC-tenellus_contig9668 4582..5001 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-tenellus_contig9668.2.1

>prot_C-tenellus_contig9668.2.1 ID=prot_C-tenellus_contig9668.2.1|Name=mRNA_C-tenellus_contig9668.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=140bp
MLGRLAHHGIYAAGDKTLMFTTETTLYGKIYTGQTVRHDPVHLQGLIDLR
SFEIVRELMQFLQAVNWLKIHLPHMSETVEPLLLERRLAGVKCQSKRVAS
THPIHGGDWSLEQLAVWTTAQKMISQVVELSHPRRSVLC*
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mRNA from alignment at C-tenellus_contig9668:4240..5001+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-tenellus_contig9668.2.1 ID=mRNA_C-tenellus_contig9668.2.1|Name=mRNA_C-tenellus_contig9668.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=762bp|location=Sequence derived from alignment at C-tenellus_contig9668:4240..5001+ (Choristocarpus tenellus KU2346)
GCAGTGAACAGTCGCACAGAGGCATGCCCCTTCCCTATGCCCAACCTCGA GCCAATGATGGTCAAACTTCAAGGTGCGGCCTGCTTTGCCAAGCTTGATC TGTTCAAAGGTTACTGGCAGTTTCCATTGTCTGAACTGGGACAGGAAATC TATACGGTGAGGGGGGAAGACCTATTCTCCCCAACCTGTGTGCCACAGGG CGCGCTCAATGCTACCTCTCATTCCCAAGCACAGATGAGTCAAGTCTTAA CAGGTTTGTCGCACACGATCTGCATGCTGTGGGTTGATGACATCATCCTG TGGGGCTGAGACGCAGATGATCTGGTGAATAATCTCGATCCTATGCTTGG CAGGCTGGCCCACCATGGGATCTATGCTGCAGGTGACAAGACCCTGATGT TCACCACTGAGACAACATTGTATGGGAAGATCTATACAGGACAGACTGTC CGGCATGACCCTGTTCATCTGCAGGGGCTGATTGACCTTCGCAGTTTCGA GATAGTGAGGGAGCTGATGCAGTTCTTGCAGGCCGTAAACTGGCTGAAGA TACATCTACCTCATATGTCTGAGACAGTAGAGCCCCTTTTGCTGGAAAGG CGTCTGGCAGGTGTAAAATGCCAGTCCAAACGGGTAGCCTCCACCCACCC CATACATGGGGGGGATTGGTCCCTGGAGCAGCTGGCGGTCTGGACGACTG CGCAGAAAATGATCTCACAGGTGGTGGAGCTCTCACACCCCAGGAGGAGT GTGCTGTGCTGA
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Coding sequence (CDS) from alignment at C-tenellus_contig9668:4240..5001+

>mRNA_C-tenellus_contig9668.2.1 ID=mRNA_C-tenellus_contig9668.2.1|Name=mRNA_C-tenellus_contig9668.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=420bp|location=Sequence derived from alignment at C-tenellus_contig9668:4240..5001+ (Choristocarpus tenellus KU2346)
ATGCTTGGCAGGCTGGCCCACCATGGGATCTATGCTGCAGGTGACAAGAC
CCTGATGTTCACCACTGAGACAACATTGTATGGGAAGATCTATACAGGAC
AGACTGTCCGGCATGACCCTGTTCATCTGCAGGGGCTGATTGACCTTCGC
AGTTTCGAGATAGTGAGGGAGCTGATGCAGTTCTTGCAGGCCGTAAACTG
GCTGAAGATACATCTACCTCATATGTCTGAGACAGTAGAGCCCCTTTTGC
TGGAAAGGCGTCTGGCAGGTGTAAAATGCCAGTCCAAACGGGTAGCCTCC
ACCCACCCCATACATGGGGGGGATTGGTCCCTGGAGCAGCTGGCGGTCTG
GACGACTGCGCAGAAAATGATCTCACAGGTGGTGGAGCTCTCACACCCCA
GGAGGAGTGTGCTGTGCTGA
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