prot_C-tenellus_contig9405.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9405.2.1
Unique Nameprot_C-tenellus_contig9405.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length69
Homology
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BLAST of mRNA_C-tenellus_contig9405.2.1 vs. uniprot
Match: A0A6H5L4Q3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q3_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 9.620e-12
Identity = 31/61 (50.82%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:    4 RFPQLAAKIKAFVSQSEDEELILGTDMRPAERLAAHCLCLDEGLGHESRGEEPYKRLHIWK 64
            +FP++AA+++ F +QSED EL+  + +   ER AAH L   EGLGHESRG+E  + LH+WK
Sbjct:  753 KFPKIAAQVREF-AQSEDRELVFPSGLSARERNAAHSLAAGEGLGHESRGDEGNRALHLWK 812
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9405.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4Q3_9PHAE9.620e-1250.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001374R3H domainPFAMPF01424R3Hcoord: 7..64
e-value: 6.5E-10
score: 38.8
IPR001374R3H domainPROSITEPS51061R3Hcoord: 2..66
score: 10.991
IPR036867R3H domain superfamilyGENE3D3.30.1370.50coord: 1..68
e-value: 4.8E-9
score: 37.9
IPR036867R3H domain superfamilySUPERFAMILY82708R3H domaincoord: 7..65
NoneNo IPR availableCDDcd02325R3Hcoord: 7..62
e-value: 1.78582E-7
score: 41.0606

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9405contigC-tenellus_contig9405:594..1304 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9405.2.1mRNA_C-tenellus_contig9405.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9405 594..2699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9405.2.1 ID=prot_C-tenellus_contig9405.2.1|Name=mRNA_C-tenellus_contig9405.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=69bp
MDSRFPQLAAKIKAFVSQSEDEELILGTDMRPAERLAAHCLCLDEGLGHE
SRGEEPYKRLHIWKVGRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001374R3H_dom
IPR036867R3H_dom_sf