prot_C-tenellus_contig9356.1.3 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9356.1.3
Unique Nameprot_C-tenellus_contig9356.1.3
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length324
Homology
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BLAST of mRNA_C-tenellus_contig9356.1.3 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 5.210e-6
Identity = 35/93 (37.63%), Postives = 48/93 (51.61%), Query Frame = 0 
Query:  239 GNVDEAEPLFRQGIDELESALGPDHPDVAAVLSHLAALLND---------------------QGRNREARGLLERALATVERVYGPSHPVAVQ 310
            G   EAEPL+R+  +  E+ALGP+HP +A  L++ A LL++                     QG+  EA  L ER+LA  E+V GP HP   Q
Sbjct:  736 GKFAEAEPLYRRATEIWETALGPEHPQMATALNNRAGLLSNVPPHSLSSFHSSNTHHVFITFQGKYEEAGPLYERSLAIREKVLGPDHPDVAQ 828
[Close]
BLAST of mRNA_C-tenellus_contig9356.1.3 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.400e-5
Identity = 37/97 (38.14%), Postives = 48/97 (49.48%), Query Frame = 0 
Query:  236 ILSGNVDEAEPLFRQGIDELESALGPDHPDVAAVLSHLAALLNDQ---------------GRNREARGLLERALATVERVYGPSH-PVAVQLRTVLG 316
            +  G   EAEPL+ +     E+ALGP+HP+VA  L++ A LL DQ               G+  EA  L   +LA  E+VYGP H  VA  L    G
Sbjct:   28 VSQGKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQRRQTNFSPPLPVTFQGKYEEAEPLYMLSLAIDEKVYGPDHLEVAEDLNNCAG 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9356.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJK0_9PHAE5.210e-637.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5H9_9PHAE1.400e-538.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 116..133
score: 48.89
coord: 160..180
score: 40.95
coord: 51..69
score: 41.58
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 162..195
e-value: 410.0
score: 0.8
coord: 120..153
e-value: 0.45
score: 19.6
coord: 78..111
e-value: 1.6
score: 17.8
coord: 267..300
e-value: 44.0
score: 9.3
coord: 36..69
e-value: 9.3
score: 15.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..87
e-value: 4.3E-22
score: 81.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 88..221
e-value: 7.7E-43
score: 148.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 227..316
e-value: 4.6E-20
score: 73.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 72..218
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 235..316
NoneNo IPR availablePFAMPF13374TPR_10coord: 6..34
e-value: 0.005
score: 16.7
NoneNo IPR availablePFAMPF13424TPR_12coord: 119..191
e-value: 6.9E-17
score: 61.5
coord: 40..109
e-value: 1.6E-15
score: 57.2
coord: 233..298
e-value: 4.8E-11
score: 42.8
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 113..218
coord: 233..311
coord: 9..144
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 36..153
score: 11.45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9356contigC-tenellus_contig9356:372..5024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9356.1.3mRNA_C-tenellus_contig9356.1.3Choristocarpus tenellus KU2346mRNAC-tenellus_contig9356 348..5810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9356.1.3 ID=prot_C-tenellus_contig9356.1.3|Name=mRNA_C-tenellus_contig9356.1.3|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=324bp
MQMMINAGKPTEAQELGRRALSIVESAYGPAHPELATCLNNLSALLHAQK
RDSEAEPLCRRALDISESVYGPQHPKVATCLNNLATQVQARGELEEAEDL
FSRALDIGRSAYGSSHPNVATGLSNLAGLLRCQGKLDEAEPLYRRAVEIG
DETLGPDHPDLATWLNNLATLVRDKGDVDGAEPLQRRAVAIGRRTLEAGH
PDLAAQIINLASLLGAQGVILAGGGVLDSVLISFYILSGNVDEAEPLFRQ
GIDELESALGPDHPDVAAVLSHLAALLNDQGRNREARGLLERALATVERV
YGPSHPVAVQLRTVLGPDGGYGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom