prot_C-tenellus_contig9320.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig9320.1.1
Unique Nameprot_C-tenellus_contig9320.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length386
Homology
BLAST of mRNA_C-tenellus_contig9320.1.1 vs. uniprot
Match: A0A6H5KU27_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KU27_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 7.260e-60
Identity = 122/211 (57.82%), Postives = 138/211 (65.40%), Query Frame = 0
Query:    1 MTDRTAEFQGVVKVFRRSIPVDE------LARPPPS---RDTSDFFRTAASIALGFEGTSKLIDRVKKLVGRKGFSNNPAAEINVVMNLFESDMADLQRDIEILSLQIHASTNLNVKGTSLSLSLASTTSRYTDGNSKGGPRPNSQHQKHCLHIVTTLRNAAKEHTKAFRDALLLRAAVEKQQNDRQRIFSHSRGVAPMAQLDYPLFGGGG 202
            MTDRT EF G V  FR ++          L R       R TS+F + AAS+A+GFEGTS+LI R+KKLVGRKGFSNNPAAEI+ VM LFE DMA LQ+DI   SLQ                       RY DG ++G P  NSQ Q HC  IVTTLR +A+EHTKAFRDAL+LRAAVEKQQN+RQR FSHSRGVAP  QLDYPLFG  G
Sbjct:    3 MTDRTKEFHGAVSAFRPTVTAVNNSGEAALIRAQTDLGYRKTSEFLQLAASVAVGFEGTSRLIGRLKKLVGRKGFSNNPAAEISDVMKLFEGDMAGLQKDIS--SLQ-----------------------RYADGGTRGSPPANSQRQMHCAFIVTTLRRSAQEHTKAFRDALMLRAAVEKQQNERQRKFSHSRGVAPATQLDYPLFGSSG 188          
BLAST of mRNA_C-tenellus_contig9320.1.1 vs. uniprot
Match: A0A835Z5V3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5V3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.790e-27
Identity = 69/200 (34.50%), Postives = 107/200 (53.50%), Query Frame = 0
Query:    1 MTDRTAEFQGVVKVFRRSIPVDELARPPPSRDTSDFFRTAASIALGFEGTSKLIDRVKKLVGRKGFSNNPAAEINVVMNLFESDMADLQRDIEILSLQIHASTNLNVKGTSLSLSLASTTSRYTDGNS--KGGPRPNSQHQKHCLHIVTTLRNAAKEHTKAFRDALLLRAAVEKQQNDRQRIFSHSRGVAPMAQLDYPLF 198
            M DRTAEFQG ++V  +     +      +   +DF +  +++AL  EGT+KLI+++ +LVGRKG SN+P  EI  V  LF+ DM  +Q+++  L                           + DG S  +G P P SQ  KH L+++  L+  A+E   AF+ AL  R AV ++ NDR++++S +R V    Q++ PLF
Sbjct:    1 MIDRTAEFQGCIRVLHQHDGRPDQRPQYEAPQPTDFTKAVSALALSLEGTAKLIEQLMRLVGRKGTSNDPTMEITDVSRLFKGDMDAVQQELSALQA-------------------------FIDGRSGKRGAPAPGSQRHKHSLYMLDALKQLAQEQVAAFQAALKQRNAVMRELNDRRKVYSTTRSVGLSVQMNSPLF 175          
BLAST of mRNA_C-tenellus_contig9320.1.1 vs. uniprot
Match: A0A4D9CWV4_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.280e-24
Identity = 81/211 (38.39%), Postives = 111/211 (52.61%), Query Frame = 0
Query:    1 MTDRTAEFQGVVKVFR-RSIPVDE-------------LARPPPSRDTSDFFRTAASIALGFEGTSKLIDRVKKLVGRKGFSNNPAAEINVVMNLFESDMADLQRDIEILSLQIHASTNLNVKGTSLSLSLASTTSRYTDGNSKGGPRPNSQHQKHCLHIVTTLRNAAKEHTKAFRDALLLRAAVEKQQNDRQRIFSHSRGVAPMAQLDYPL 197
            M DR+ EFQG++K+F    +P +E                PPPS  TSDF   AA IA G+ GT +L+ R+++LV RKG  N+P AEI  V  +F+ D+A LQ DIE  SL  HA  +  + G                G+ KGG     +H +HC  +V TLR  A EH +AF+ AL  R  + ++Q DR++ F+HS    P    D PL
Sbjct:    1 MMDRSREFQGLLKLFGITDLPPEEDESDPFEPFPSPTSTAPPPS--TSDFGLAAARIAQGYSGTWRLVQRLQRLVTRKGMHNDPTAEIEDVTAVFKKDLAGLQGDIE--SLLRHAGRHYRLAGVD-----GGRKDNVDRGHEKGGCHDQQRH-RHCTCVVDTLRTRAGEHARAFQAALQTRQHILQEQADRRKRFTHSA-PGPRLAYDSPL 200          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig9320.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KU27_9PHAE7.260e-6057.82t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835Z5V3_9STRA2.790e-2734.50Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A4D9CWV4_9STRA1.280e-2438.39t-SNARE coiled-coil homology domain-containing pro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 78..98
NoneNo IPR availableGENE3D1.20.58.70coord: 30..247
e-value: 4.1E-7
score: 31.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 202..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 332..357
IPR010989SNARESUPERFAMILY47661t-snare proteinscoord: 32..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig9320contigC-tenellus_contig9320:2309..4324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig9320.1.1mRNA_C-tenellus_contig9320.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig9320 2309..4324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig9320.1.1 ID=prot_C-tenellus_contig9320.1.1|Name=mRNA_C-tenellus_contig9320.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=386bp
MTDRTAEFQGVVKVFRRSIPVDELARPPPSRDTSDFFRTAASIALGFEGT
SKLIDRVKKLVGRKGFSNNPAAEINVVMNLFESDMADLQRDIEILSLQIH
ASTNLNVKGTSLSLSLASTTSRYTDGNSKGGPRPNSQHQKHCLHIVTTLR
NAAKEHTKAFRDALLLRAAVEKQQNDRQRIFSHSRGVAPMAQLDYPLFGG
GGGGNSGLKRRDRYKSRVGEHSTKGASSGVAEGGLGNDQQLRRPPEQLKA
TTIPKLEQGQGPENTPLPFPGANTDVGKTGTNGFDPNGHVELFSTAHPAM
DRETRRTGIATVGETGERITAPRLPGVLAPPAQPSSRNNLSLDSGATYGS
AWSNGGGNSGVAGKGRSHSGSTQGVGGSFGLRKRGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010989SNARE