prot_C-tenellus_contig7809.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7809.2.1
Unique Nameprot_C-tenellus_contig7809.2.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length104
Homology
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BLAST of mRNA_C-tenellus_contig7809.2.1 vs. uniprot
Match: A0A6H5K937_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K937_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 3.350e-6
Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 0 
Query:    1 MLYADDPGIFSNTQGGWPKM-TVIVKVVRSFPPAMA-LNTEAMCLRRPNQAAAIMQIQALGQTCKQADKFVYLGDTLS 76
            MLYADD  I S +     KM ++IV+V   F   ++ L  E MC+           + A+GQTCKQ D+FVY G T+S
Sbjct:  247 MLYADDAAIVSRSPESLEKMMSIIVRVAGLFGLMVSELKMEIMCMLPKGIEERPFTVSAVGQTCKQTDRFVYFGRTIS 324
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7809.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K937_9PHAE3.350e-641.03Reverse transcriptase domain-containing protein (F... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7809contigC-tenellus_contig7809:3198..3680 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7809.2.1mRNA_C-tenellus_contig7809.2.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7809 3129..4346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7809.2.1 ID=prot_C-tenellus_contig7809.2.1|Name=mRNA_C-tenellus_contig7809.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=104bp
MLYADDPGIFSNTQGGWPKMTVIVKVVRSFPPAMALNTEAMCLRRPNQAA
AIMQIQALGQTCKQADKFVYLGDTLSDKPAIIAEISQTIQKAWSCFCKYR
VQH*
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