prot_C-tenellus_contig7274.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig7274.3.1
Unique Name	prot_C-tenellus_contig7274.3.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	51

Homology

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A6U3ULQ3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ULQ3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.750e-17
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARS+SNILR+SLGPKGMDKMLVSPDGDVTITNDGATI
Sbjct:   31 KSNILAARSISNILRTSLGPKGMDKMLVSPDGDVTITNDGATI 73

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A2A2M0N7_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2M0N7_9BILA)

HSP 1 Score: 76.6 bits (187), Expect = 7.010e-17
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +S+ILAARSVSN LRSSLGP+G+DKM+VSPDGDVTITNDGATI
Sbjct:   35 KSHILAARSVSNTLRSSLGPRGLDKMIVSPDGDVTITNDGATI 77

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.470e-16
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAARSVSNILRSSLGPKGMDKMLVSPDGDVTI+NDGATI
Sbjct:   31 KTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATI 73

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S0SVM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVM0_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-16
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNI+AARSVSN+LR+SLGPKGMDKMLVS DGDVTITNDGATI
Sbjct:   31 KSNIMAARSVSNLLRTSLGPKGMDKMLVSSDGDVTITNDGATI 73

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: B7G2T8_PHATC (T-complex protein 1 subunit epsilon n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2T8_PHATC)

HSP 1 Score: 79.7 bits (195), Expect = 3.750e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARS+SN+LR+SLGPKG+DKMLVSPDGDVTITNDGATI
Sbjct:   31 KSNILAARSISNMLRTSLGPKGLDKMLVSPDGDVTITNDGATI 73

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A1E7FRJ6_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRJ6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.760e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAARS+SNILR+SLGPKGMDK+LVSPDGDVTITNDGATI
Sbjct:   31 KANILAARSISNILRTSLGPKGMDKLLVSPDGDVTITNDGATI 73

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.000e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARSVS++LR+SLGPKGMDKM+VSPDGDVTITNDGATI
Sbjct:   32 KSNILAARSVSSLLRTSLGPKGMDKMMVSPDGDVTITNDGATI 74

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S2SPL3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPL3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.330e-16
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARSVSNILR+SLGPKGMDKMLV  DG VTITNDGATI
Sbjct:   60 KSNILAARSVSNILRTSLGPKGMDKMLVDQDGGVTITNDGATI 102

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A261BK46_9PELO (Uncharacterized protein (Fragment) n=3 Tax=Caenorhabditis TaxID=6237 RepID=A0A261BK46_9PELO)

HSP 1 Score: 73.9 bits (180), Expect = 9.180e-16
Identity = 35/43 (81.40%), Postives = 42/43 (97.67%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +S+ILAAR+V+N LR+SLGP+G+DKMLVSPDGDVTITNDGATI
Sbjct:   36 KSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATI 78

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BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S3PR08_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR08_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 9.560e-16
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0

Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAAR+VS +LRSSLGPKGMDKMLVSPDGDVTITNDGATI
Sbjct:   31 KANILAARTVSGVLRSSLGPKGMDKMLVSPDGDVTITNDGATI 73

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6U3ULQ3_9STRA	5.750e-17	93.02	T-complex protein 1 subunit epsilon n=1 Tax=Ditylu...	[more]
A0A2A2M0N7_9BILA	7.010e-17	86.05	Uncharacterized protein n=1 Tax=Diploscapter pachy...	[more]
D7FI32_ECTSI	1.470e-16	93.02	T-complex protein 1 subunit epsilon n=2 Tax=Ectoca...	[more]
A0A7S0SVM0_9STRA	1.810e-16	88.37	Hypothetical protein (Fragment) n=1 Tax=Chromulina...	[more]
B7G2T8_PHATC	3.750e-16	88.37	T-complex protein 1 subunit epsilon n=1 Tax=Phaeod...	[more]
A0A1E7FRJ6_9STRA	3.760e-16	88.37	T-complex protein 1 subunit epsilon n=3 Tax=Bacill...	[more]
A0A835ZI55_9STRA	7.000e-16	88.37	T-complex protein 1 subunit epsilon n=1 Tax=Tribon...	[more]
A0A7S2SPL3_9STRA	7.330e-16	88.37	Hypothetical protein (Fragment) n=2 Tax=Rhizochrom...	[more]
A0A261BK46_9PELO	9.180e-16	81.40	Uncharacterized protein (Fragment) n=3 Tax=Caenorh...	[more]
A0A7S3PR08_9STRA	9.560e-16	88.37	T-complex protein 1 subunit epsilon n=3 Tax=Aplano...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017998	Chaperone tailless complex polypeptide 1 (TCP-1)	PRINTS	PR00304	TCOMPLEXTCP1	coord: 20..36 score: 43.31 coord: 42..51 score: 31.19
IPR027413	GroEL-like equatorial domain superfamily	GENE3D	1.10.560.10		coord: 6..51 e-value: 1.3E-17 score: 65.8
IPR027413	GroEL-like equatorial domain superfamily	SUPERFAMILY	48592	GroEL equatorial domain-like	coord: 8..51
IPR002423	Chaperonin Cpn60/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 18..51 e-value: 3.1E-13 score: 49.2
None	No IPR available	PANTHER	PTHR11353	CHAPERONIN	coord: 9..51
None	No IPR available	PANTHER	PTHR11353:SF94	T-COMPLEX PROTEIN 1 SUBUNIT EPSILON	coord: 9..51
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..9
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 10..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 15..51
IPR002194	Chaperonin TCP-1, conserved site	PROSITE	PS00750	TCP1_1	coord: 23..35

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig7274	contig	C-tenellus_contig7274:4809..4961 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig7274.3.1	mRNA_C-tenellus_contig7274.3.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig7274 4809..4961 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig7274.3.1 ID=prot_C-tenellus_contig7274.3.1|Name=mRNA_C-tenellus_contig7274.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=51bp
MLVCAILFQSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGAT
I

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017998	Chaperone_TCP-1
IPR027413	GROEL-like_equatorial_sf
IPR002423	Cpn60/TCP-1
IPR002194	Chaperonin_TCP-1_CS