prot_C-tenellus_contig7274.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7274.3.1
Unique Nameprot_C-tenellus_contig7274.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length51
Homology
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A6U3ULQ3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ULQ3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.750e-17
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARS+SNILR+SLGPKGMDKMLVSPDGDVTITNDGATI
Sbjct:   31 KSNILAARSISNILRTSLGPKGMDKMLVSPDGDVTITNDGATI 73          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A2A2M0N7_9BILA (Uncharacterized protein n=1 Tax=Diploscapter pachys TaxID=2018661 RepID=A0A2A2M0N7_9BILA)

HSP 1 Score: 76.6 bits (187), Expect = 7.010e-17
Identity = 37/43 (86.05%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +S+ILAARSVSN LRSSLGP+G+DKM+VSPDGDVTITNDGATI
Sbjct:   35 KSHILAARSVSNTLRSSLGPRGLDKMIVSPDGDVTITNDGATI 77          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.470e-16
Identity = 40/43 (93.02%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAARSVSNILRSSLGPKGMDKMLVSPDGDVTI+NDGATI
Sbjct:   31 KTNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTISNDGATI 73          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S0SVM0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVM0_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.810e-16
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNI+AARSVSN+LR+SLGPKGMDKMLVS DGDVTITNDGATI
Sbjct:   31 KSNIMAARSVSNLLRTSLGPKGMDKMLVSSDGDVTITNDGATI 73          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: B7G2T8_PHATC (T-complex protein 1 subunit epsilon n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2T8_PHATC)

HSP 1 Score: 79.7 bits (195), Expect = 3.750e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARS+SN+LR+SLGPKG+DKMLVSPDGDVTITNDGATI
Sbjct:   31 KSNILAARSISNMLRTSLGPKGLDKMLVSPDGDVTITNDGATI 73          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A1E7FRJ6_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FRJ6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 3.760e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAARS+SNILR+SLGPKGMDK+LVSPDGDVTITNDGATI
Sbjct:   31 KANILAARSISNILRTSLGPKGMDKLLVSPDGDVTITNDGATI 73          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.000e-16
Identity = 38/43 (88.37%), Postives = 43/43 (100.00%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARSVS++LR+SLGPKGMDKM+VSPDGDVTITNDGATI
Sbjct:   32 KSNILAARSVSSLLRTSLGPKGMDKMMVSPDGDVTITNDGATI 74          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S2SPL3_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPL3_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 7.330e-16
Identity = 38/43 (88.37%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +SNILAARSVSNILR+SLGPKGMDKMLV  DG VTITNDGATI
Sbjct:   60 KSNILAARSVSNILRTSLGPKGMDKMLVDQDGGVTITNDGATI 102          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A261BK46_9PELO (Uncharacterized protein (Fragment) n=3 Tax=Caenorhabditis TaxID=6237 RepID=A0A261BK46_9PELO)

HSP 1 Score: 73.9 bits (180), Expect = 9.180e-16
Identity = 35/43 (81.40%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            +S+ILAAR+V+N LR+SLGP+G+DKMLVSPDGDVTITNDGATI
Sbjct:   36 KSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATI 78          
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Match: A0A7S3PR08_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR08_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 9.560e-16
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    9 QSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGATI 51
            ++NILAAR+VS +LRSSLGPKGMDKMLVSPDGDVTITNDGATI
Sbjct:   31 KANILAARTVSGVLRSSLGPKGMDKMLVSPDGDVTITNDGATI 73          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7274.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U3ULQ3_9STRA5.750e-1793.02T-complex protein 1 subunit epsilon n=1 Tax=Ditylu... [more]
A0A2A2M0N7_9BILA7.010e-1786.05Uncharacterized protein n=1 Tax=Diploscapter pachy... [more]
D7FI32_ECTSI1.470e-1693.02T-complex protein 1 subunit epsilon n=2 Tax=Ectoca... [more]
A0A7S0SVM0_9STRA1.810e-1688.37Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
B7G2T8_PHATC3.750e-1688.37T-complex protein 1 subunit epsilon n=1 Tax=Phaeod... [more]
A0A1E7FRJ6_9STRA3.760e-1688.37T-complex protein 1 subunit epsilon n=3 Tax=Bacill... [more]
A0A835ZI55_9STRA7.000e-1688.37T-complex protein 1 subunit epsilon n=1 Tax=Tribon... [more]
A0A7S2SPL3_9STRA7.330e-1688.37Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A261BK46_9PELO9.180e-1681.40Uncharacterized protein (Fragment) n=3 Tax=Caenorh... [more]
A0A7S3PR08_9STRA9.560e-1688.37T-complex protein 1 subunit epsilon n=3 Tax=Aplano... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 20..36
score: 43.31
coord: 42..51
score: 31.19
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 6..51
e-value: 1.3E-17
score: 65.8
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 8..51
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 18..51
e-value: 3.1E-13
score: 49.2
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 9..51
NoneNo IPR availablePANTHERPTHR11353:SF94T-COMPLEX PROTEIN 1 SUBUNIT EPSILONcoord: 9..51
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..51
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 23..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7274contigC-tenellus_contig7274:4809..4961 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7274.3.1mRNA_C-tenellus_contig7274.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7274 4809..4961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7274.3.1 ID=prot_C-tenellus_contig7274.3.1|Name=mRNA_C-tenellus_contig7274.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=51bp
MLVCAILFQSNILAARSVSNILRSSLGPKGMDKMLVSPDGDVTITNDGAT
I
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial_sf
IPR002423Cpn60/TCP-1
IPR002194Chaperonin_TCP-1_CS