prot_C-tenellus_contig7112.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig7112.1.1
Unique Nameprot_C-tenellus_contig7112.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length44
Homology
BLAST of mRNA_C-tenellus_contig7112.1.1 vs. uniprot
Match: D8LR38_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR38_ECTSI)

HSP 1 Score: 63.2 bits (152), Expect = 1.860e-10
Identity = 26/41 (63.41%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    3 REKLIRESLSIPNFERVLQSSISCQHSKRKAWGSKYGSGIR 43
            R++LI+E LSIPNF R LQ++I C H++ KAWG KYGSG+R
Sbjct: 1492 RDRLIKEELSIPNFGRALQANIGCSHTRTKAWGDKYGSGLR 1532          
BLAST of mRNA_C-tenellus_contig7112.1.1 vs. uniprot
Match: A0A662XCN2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCN2_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 5.710e-6
Identity = 21/41 (51.22%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    4 EKLIRESLSIPNFERVLQSS-ISCQHSKRKAWGSKYGSGIR 43
            E+  +++L IPNF RV+ SS + C+H + KAWG KYGSG++
Sbjct:  267 ERRAKDALCIPNFHRVVDSSRVECEHRELKAWGGKYGSGLK 307          
BLAST of mRNA_C-tenellus_contig7112.1.1 vs. uniprot
Match: A0A662X607_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X607_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 7.820e-6
Identity = 22/40 (55.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    5 KLIRESLSIPNFERVLQSS-ISCQHSKRKAWGSKYGSGIR 43
            K  +E L IPNF RV+ SS + C+H + KAWG KYGSG++
Sbjct:  970 KRAKEVLCIPNFHRVIDSSRVECEHRELKAWGGKYGSGLK 1009          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig7112.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LR38_ECTSI1.860e-1063.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A662XCN2_9STRA5.710e-651.22Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A662X607_9STRA7.820e-655.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig7112contigC-tenellus_contig7112:107..238 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig7112.1.1mRNA_C-tenellus_contig7112.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig7112 107..238 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig7112.1.1 ID=prot_C-tenellus_contig7112.1.1|Name=mRNA_C-tenellus_contig7112.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=44bp
KKREKLIRESLSIPNFERVLQSSISCQHSKRKAWGSKYGSGIR*
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