prot_C-tenellus_contig6921.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6921.1.1
Unique Nameprot_C-tenellus_contig6921.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length252
Homology
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BLAST of mRNA_C-tenellus_contig6921.1.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.370e-7
Identity = 42/105 (40.00%), Postives = 54/105 (51.43%), Query Frame = 0 
Query:  153 GTGQEQPSGPTGMDLEVMPMSELWFGYRKYRLVVCLDMSSSMLEQQCWTCVLDQERRGMPLMHLLEASMDIIQGVVAPMGLADGNLGNAAG-----GVCEELYVS 252
            GTG   P       LEV   S LWF +RKYRLVVCLD+S+SM   + W         G+P+   +  +M  IQ +VAP+  A    G A       G+ EE+YVS
Sbjct:  232 GTGASSP-------LEVSSRSVLWFAHRKYRLVVCLDLSTSMCTGRWW---------GIPVELFVNNTMKYIQALVAPITDARQQQGAAQSPSSRMGIAEEVYVS 320
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BLAST of mRNA_C-tenellus_contig6921.1.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-6
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 0 
Query:  167 LEVMPMSELWFGYRKYRLVVCLDMSSSMLEQQCWTCVLDQERRGMPLMHLLEASMDIIQGVVAPMGLADGNLGNAAG-----GVCEELYVS 252
            LEV   S LWF +RKYRLVVCLD+S+SM   + W         G+P+   ++ +M  IQ +VAP+  A    G A       G+ EE++VS
Sbjct:  235 LEVSSRSALWFAHRKYRLVVCLDLSTSMCTGRWW---------GIPVELFVKNTMKYIQALVAPITDARQQQGAAQSPSSRMGIAEEVHVS 316
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BLAST of mRNA_C-tenellus_contig6921.1.1 vs. uniprot
Match: A0A836C7M7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7M7_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 4.370e-5
Identity = 50/186 (26.88%), Postives = 74/186 (39.78%), Query Frame = 0 
Query:   53 IKEAIVLVSDASLFAVRERAQWHLGCMHA-SPFGRRTRTSEDQPKQAHLPSAHLAGDFDIGGNLSLVETLMCDLVPPGRRRRQRGHTESASLAAD--------------------------------GSDKSFGTGQEQPSGPTGMDLEVMPMSELWFGYRKYRLVVCLDMSSSMLEQQCWTCVLD 205
            + EA+VLV D+S + V ERA WHL C+   SP          Q     +    LAGD     +L L++  +       RRR +R    +   +AD                                       +G +     +   L ++P S+LWF + KYR+V  LD+S+SML Q  W   +D
Sbjct:   17 VAEAVVLVPDSSRYGVNERALWHLRCLQTPSPI-------VQQGDGDCVLVNKLAGD-----DLHLLDVQLRAGASAVRRRGRRADVRNRHSSADLRAVAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGGDSSITASSTSLAIVPGSQLWFVFAKYRIVFALDLSTSMLAQNHWALPID 190
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6921.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHK8_ECTSI3.370e-740.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ7_9PHAE2.100e-640.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836C7M7_9STRA4.370e-526.88Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..161
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6921contigC-tenellus_contig6921:3927..5645 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6921.1.1mRNA_C-tenellus_contig6921.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6921 3819..5645 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6921.1.1 ID=prot_C-tenellus_contig6921.1.1|Name=mRNA_C-tenellus_contig6921.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=252bp
MAIESMDVVLKSPARNRRRPPLDSPSRRRARAHGAGRQEQTSAGDDDASQ
LAIKEAIVLVSDASLFAVRERAQWHLGCMHASPFGRRTRTSEDQPKQAHL
PSAHLAGDFDIGGNLSLVETLMCDLVPPGRRRRQRGHTESASLAADGSDK
SFGTGQEQPSGPTGMDLEVMPMSELWFGYRKYRLVVCLDMSSSMLEQQCW
TCVLDQERRGMPLMHLLEASMDIIQGVVAPMGLADGNLGNAAGGVCEELY
VS
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