prot_C-tenellus_contig692.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig692.1.2
Unique Nameprot_C-tenellus_contig692.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length205
Homology
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BLAST of mRNA_C-tenellus_contig692.1.2 vs. uniprot
Match: D7FM23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM23_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 8.950e-24
Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 0 
Query:   42 SGKEASVVVERLGGNMMSLHAEPAPDRDSGTMGEGVGEY---SELAFQTETMKADGDAQPLLVQYFKSIVRAAANP-----------------EELHDCIVCLGPMEVPRSLLQALAAPLHD 143
            SGKE+++VVER GGNMM+L+AEP     S  MG G G     SEL+F T  MKAD DA+ LL +YF+SIVRA+++P                 +EL DCIVC+G M+VP SLLQ LAAPL D
Sbjct:  153 SGKESALVVERYGGNMMTLNAEP-----SAVMGGGDGPVPPESELSFTTHVMKADDDARTLLGRYFQSIVRASSDPSPQAYSRYCRVTSSRVSKELQDCIVCIGAMDVPLSLLQELAAPLPD 269
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig692.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM23_ECTSI8.950e-2452.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig692contigC-tenellus_contig692:3012..5497 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig692.1.2mRNA_C-tenellus_contig692.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig692 2249..6670 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig692.1.2 ID=prot_C-tenellus_contig692.1.2|Name=mRNA_C-tenellus_contig692.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=205bp
MSSPHWVKVSGGGVPASVFRPLVGHSLRRLPNVVCPLRSSQSGKEASVVV
ERLGGNMMSLHAEPAPDRDSGTMGEGVGEYSELAFQTETMKADGDAQPLL
VQYFKSIVRAAANPEELHDCIVCLGPMEVPRSLLQALAAPLHDVTGREVK
RVSSPACKPSLQTGCAGFMYCPPPTTLPREPRSYDGATPMASPHSLHQGH
PPPS*
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