prot_C-tenellus_contig6916.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig6916.1.1
Unique Nameprot_C-tenellus_contig6916.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length465
Homology
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: A0A6H5L389_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L389_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 5.510e-100
Identity = 187/408 (45.83%), Postives = 247/408 (60.54%), Query Frame = 0
Query:   82 NPVDDCMNLGAAGFGWCMLLWVFGCLSLLLNFARQSDYDEGNSTSTRSSGFRWGIFHV----QDSDGPPWLAFAPFWLGDIVGFAFLVRLICKVAGVRLAGPTR-RGTRRYGTREDSGGASGDL-------------RL----VNVDYFPLLQRVVVTWISSLLLLITLTVEQVLVCLQWGGGSEAPG---SLAVATPLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALRSNPTAPF--------LEDVPWLECLAPLWALNLLFLAAAGYLLANICLRRYLLTRVQTVCFTLYCISLVASIFAQVLLIGDERLGVSDLEV---QIFRLDLPLLLGLFALTVFCLASYLSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRAGPRV 453
            NPV+DC+  GAAG GWC+L W  G + L+L +A+                 RWG   +    +  + P WL F+PFW+GD +    LVR++ KV  +R   PTR RG RR   R  S G+  DL             RL    + +DYFPLLQRV+ T + + L+L+  T +QVL+CL+WG  ++APG    L +A PLL++E   LLRVVLIR  GW SGLT LLL  LT+LVALRS   +          L+  PW ECLAPLWA++LL+   AGY+ AN    R+++   Q +CFTL   +LV S  A++LL GD RL     +V   +  RLDLPLLL + +L  FCLA +LSVEH++S LI +HGY+DP+PL +T SGWEWSGAG   WGLLGD+S+RA  +V
Sbjct:   83 NPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAK-----------------RWGAHRLTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPTRSRGARRGVARSRSTGSLNDLSGPGSSAGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVIAAPLLLVEAFFLLRVVLIRTCGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWRECLAPLWAVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFTLLLAALVGSTVAEMLLTGDHRLYKPSDKVPRLEYLRLDLPLLLAVASLMAFCLAVFLSVEHSVSMLINTHGYDDPLPLCETPSGWEWSGAGKASWGLLGDVSVRAEKKV 473          
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: D7G0H7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H7_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 3.170e-98
Identity = 184/404 (45.54%), Postives = 246/404 (60.89%), Query Frame = 0
Query:   82 NPVDDCMNLGAAGFGWCMLLWVFGCLSLLLNFARQSDYDEGNSTSTRSSGFRWGIFHVQDSDGPPWLAFAPFWLGDIVGFAFLVRLICKVAGVRLAGPTR-RGTRRYGTREDSGGASGDL-------------RL----VNVDYFPLLQRVVVTWISSLLLLITLTVEQVLVCLQWGGGSEAPG---SLAVATPLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALRSNPTAPF--------LEDVPWLECLAPLWALNLLFLAAAGYLLANICLRRYLLTRVQTVCFTLYCISLVASIFAQVLLIGDERLG-VSDL--EVQIFRLDLPLLLGLFALTVFCLASYLSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRAGPRV 453
            NPV+DC+  GAAG GWC+L W  G + L+L +A++              G   G    +  + P WL F+PFW+GD +    LVR++ KV  +R   P R RG RR   R  S G+  DL             RL    + +DYFPLLQRV+ T + + L+L+  T +QVL+CL+WG  ++APG    L VA PLL++E   LLRVVLIR +GW SGLT LLL  LT+LVALRS   +          L+  PWLECLAPLW ++LL+   AGY+ AN    R+++   Q +CF L   +L  S  A++LL GD RL  +SD    ++  RLD+PLLL + +L  FCLA +LSVEH++S LI +HGY+DP+PL +T SGWEWSGAG   WGLLGD+S+RA  +V
Sbjct:   84 NPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRW-------------GAHRGTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPARSRGARRGDARSRSTGSLNDLSGHGSNAGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVVAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSGDDADGASGGLQSYPWLECLAPLWVVDLLYAGVAGYVAANTMAGRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHRLHKLSDKVPRLEYLRLDMPLLLAVASLMAFCLAVFLSVEHSVSMLINTHGYDDPLPLCETPSGWEWSGAGKASWGLLGDVSVRAEKKV 474          
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: A0A836C9Z9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Z9_9STRA)

HSP 1 Score: 134 bits (338), Expect = 5.640e-31
Identity = 117/417 (28.06%), Postives = 184/417 (44.12%), Query Frame = 0
Query:   77 DSDFLNPVDDCMNLGAAGFGWCMLLWVFGCLSLLLNFARQSDYDEGNSTSTRSSGFRWGIFHVQDSDGPPWLAFAPFWLGDIVGFAFLVRLICKVAGVRLAGPTRRGT--RRYGT-----------REDSG---GASGDLRLVNVDYFPLLQRVVVTWISSLLLLITLTVEQVLVCLQWGG----GSEAPGS-------LAVATPLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALRSNPTAP-FLEDVPWLECLAPLWALNLLFLAAAGYL-LANICLRRYLLTRVQTVCFTLYCISLVASIFAQVLLIGDERLGVSDLEVQIFRLDLPLLLGLFALTVFCLASYLSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRAGPRVKTKPVSSRLLG 464
            D+  +  V   ++   AG  W + LW  G  +++L  AR                            G  W+AF PFWLGDI+G AF V+L+     +R   P +R    RRYG            +E +G   G  G     ++ Y PL+QRV    + ++ LL     +QVL CL+        + APG+       L   +PLL +E   L+R+++IR  G    +T  LLLL TL +  +++  +   L D PW   L P W L  L+L    ++ +     +R +L+  Q     LY ++L+A+     +++    L    +      +  PL     A  +FCL   L++E  ++RL+ + G+EDP+PLS+    W   G G   W LLG + L      K    ++  LG
Sbjct:   47 DAAQVEAVATILHSATAGVSWTLGLWCLGLGTVMLRAARPE-------------------LAADPITGTFWVAFVPFWLGDIMGMAFQVKLLSDAYPLRFITPEQRVLLERRYGAVGGGALSNTLPQELAGLGIGPLGKSIPCDMAYMPLVQRVAFAALVTVPLLALAIAQQVLACLELSSVAALNAAAPGAVLHRGNMLVTLSPLLAVEAAALVRMLIIRTRGPLPLITAALLLLGTLSIGAKADGVSGVLLSDAPWWAVLIPFWVLIALYLGVVAHIGMGEAFAKRVILSHAQRTSLLLYALALLAAGGGLGMVVARPILQGLPIWELALHVSAPLGALWSAAAMFCLGVCLAMEGAMARLLRTKGFEDPIPLSEVAGHWVKGGPGNENWALLGVVVLNRDNAAKEAQAAAATLG 444          
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: W7U2Q5_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2Q5_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.030e-17
Identity = 97/324 (29.94%), Postives = 152/324 (46.91%), Query Frame = 0
Query:  147 WLAFAPFWLGDIVGFAFLVRLICKVAGVRLAGPTRRGTRRYGTREDSGGASGDL-RLVNVDYFPLLQRVVVTWISSLLLLITLTVEQVL--VCLQWGGGSEAPG--SLAVAT-PLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALR-SNPTAPFLEDVPWLEC---------LAPLWALNLLFLAAAGYL-LANICLRRYLLTRVQTVCFTLYCISLVASIFAQVLLI---GDERLGVSD-LEVQIFRLDLPLLLGLFALTVFCLASYLSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRA 449
            WL F PFW  D+V +  ++  +     +R +G       ++ +R  +  +  +  + ++ +  PL Q V+   +++   L+ +T   +L  + LQ GGG+      SL +A  P+++ E   L+  + +R   +   L  LL+L  TL+V LR S+P  P L  +P +             P WAL +L LA   Y+ +   C RRY L+     C  LY  SL     A V+     G    G++  L +Q F   L  +  L A+    L  YL     +  L  SHGYEDP+PLS+T  GWE +GA  + W LLG +   A
Sbjct:  130 WLIFTPFWAADLVAWMVVLWALHWTCSLRTSGV------QHESRIMAPSSHREAQKTLSTEMLPLFQIVMRALLNATPFLLCITAAHILLFIFLQSGGGNFGRPWVSLWLAILPIVLWEMLALISAICLRTGSFSKALGWLLILFATLMVGLRFSSPPFP-LSSIPCIRAAHNAPLWVTFTPFWALEILLLATLVYVSIQACCARRYRLSSQHVSCIILYTSSLGFLALASVMFAWRHGTWESGLNHALRLQNFSDTLSGIATLCAVGFAELGFYLVAADEVEHLTTSHGYEDPMPLSRTARGWEPTGARVSNWLLLGRLEETA 446          
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: A0A7S3YCK5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YCK5_HETAK)

HSP 1 Score: 87.4 bits (215), Expect = 2.220e-15
Identity = 83/288 (28.82%), Postives = 120/288 (41.67%), Query Frame = 0
Query:   82 NPVDDCMNLGAAGFGWCMLLWVFGCLSLLLNFARQSDYDEGNSTSTRSSGFRWGIFHVQDSDGPPWLAFAPFWLGDIVGFAFLVRLICKVAGVRLAGPTRRGTRRYGTREDSGGASGDLRLVNVDYFPLLQRVVVTWISSLLLLITLTVEQVLVCLQWGG--GSEAPGSLAVATPLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALRSNPTAPFLEDVPWLECLAPLWALNLLFLAAAGYLLANICLRRYLLTRVQTVCFTLYCISLVASIFAQVLLIGDE 367
            NPV+ C+ +   G G  +LLW  G L + L           N+    S  F                 F PFWLGDI+  A   R++      R     R   RRY   + +       R V+++Y PL+QRVV+    S+  L+ L   QVL+CL+  G  G+ +P + AVA PL + E   L    L+R H   S    LLL   T  +A +++         P+    AP WAL  L    A     +    R+ L R Q +   LY  +L  +  A+ +    E
Sbjct:   63 NPVELCLKIAVKGLGLTLLLWCIGLLFVALAVC--------NAAGRASWAF----------------IFTPFWLGDIMALAVQARVLAAACSFRFLPNERLALRRYLQDQST-------RAVDMNYLPLVQRVVLAVAVSVPALLLLVAFQVLLCLRLEGAAGAMSPSAAAVALPLFLAEGVGLAHFCLLRDHSLASASCWLLLFASTASLAHKADAGGA--AAFPFAAAFAPAWALTALLAGLAAGAWVDHARARHFLARRQRLALNLYAAALALAALAEAVTAAHE 317          
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Match: A0A4D9CW11_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW11_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 9.280e-5
Identity = 25/53 (47.17%), Postives = 31/53 (58.49%), Query Frame = 0
Query:  397 LASYLSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRA 449
            L  YL     +  L  SHGYEDP+PLS+T  GWE +GA  + W LLG +   A
Sbjct:   40 LGFYLVAADEVEHLTTSHGYEDPMPLSRTARGWEPTGARVSNWLLLGRLEETA 92          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig6916.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5L389_9PHAE5.510e-10045.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G0H7_ECTSI3.170e-9845.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9Z9_9STRA5.640e-3128.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U2Q5_9STRA2.030e-1729.94Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A7S3YCK5_HETAK2.220e-1528.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CW11_9STRA9.280e-547.17Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 385..403
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 269..274
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 115..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..333
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 345..365
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..248
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 334..344
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 404..464
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..293
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 294..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..268
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..114
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 366..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig6916contigC-tenellus_contig6916:2699..6028 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig6916.1.1mRNA_C-tenellus_contig6916.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig6916 2670..6962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig6916.1.1 ID=prot_C-tenellus_contig6916.1.1|Name=mRNA_C-tenellus_contig6916.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=465bp
MSIKPGYSSVRRPPASGGGVVVSGTASDAMTRGRASESSRLVYHRPNVIS
GRATAGSWGNYKSGRVSAVGRTTTSNDSDFLNPVDDCMNLGAAGFGWCML
LWVFGCLSLLLNFARQSDYDEGNSTSTRSSGFRWGIFHVQDSDGPPWLAF
APFWLGDIVGFAFLVRLICKVAGVRLAGPTRRGTRRYGTREDSGGASGDL
RLVNVDYFPLLQRVVVTWISSLLLLITLTVEQVLVCLQWGGGSEAPGSLA
VATPLLIIEFCCLLRVVLIRYHGWFSGLTCLLLLLLTLLVALRSNPTAPF
LEDVPWLECLAPLWALNLLFLAAAGYLLANICLRRYLLTRVQTVCFTLYC
ISLVASIFAQVLLIGDERLGVSDLEVQIFRLDLPLLLGLFALTVFCLASY
LSVEHTISRLIISHGYEDPVPLSKTVSGWEWSGAGTTRWGLLGDISLRAG
PRVKTKPVSSRLLG*
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