prot_C-tenellus_contig103.2.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig103.2.2
Unique Nameprot_C-tenellus_contig103.2.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length184
Homology
BLAST of mRNA_C-tenellus_contig103.2.2 vs. uniprot
Match: A0A6H5JS60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS60_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 3.380e-80
Identity = 129/173 (74.57%), Postives = 144/173 (83.24%), Query Frame = 0
Query:   14 ASAAPPDLVELDAQIMLFKEIFIPTLQYLKAQQFDAARTNTNYITRFLNLKKTIDTFIVTASDVVDDPD---LMEKAVDMAQEVDALFTNFDSSVYTIIFIPGDADGVLPPGAEKYLKQAYGFYDSVLKLLDFYITLVPPETQDKAKAILPAKMAALPKFLFKENSVVMKAKM 183
            A AA   L EL+A IM+ KE+F PTLQYLKA+QFDAARTNTNYITRF NLKK ID+FIV ASDVVDDPD    +EKA DMAQEV+ALFTNFDSSVYTIIFIP DA+GVLPPGAEKYLKQAYGFYD + K+LDFYI LVPPET+  A+ +LPAK A LP FLFKE S +MK K+
Sbjct:   95 AEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVDDPDTASFIEKAFDMAQEVEALFTNFDSSVYTIIFIPADAEGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPGFLFKEKSTLMKEKV 267          
BLAST of mRNA_C-tenellus_contig103.2.2 vs. uniprot
Match: D7FL66_ECTSI (TPT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL66_ECTSI)

HSP 1 Score: 255 bits (651), Expect = 5.160e-78
Identity = 130/169 (76.92%), Postives = 143/169 (84.62%), Query Frame = 0
Query:   14 ASAAPPDLVELDAQIMLFKEIFIPTLQYLKAQQFDAARTNTNYITRFLNLKKTIDTFIVTASDVVDDPDLMEKAVDMAQEVDALFTNFDSSVYTIIFIPGDADGVLPPGAEKYLKQAYGFYDSVLKLLDFYITLVPPETQDKAKAILPAKMAALPKFLFKENSVVMKAK 182
            A AA   L EL+A IM+ KE+F PTLQYLKA+QFDAARTNTNYITRF NLKK ID+FIV ASDVV+DPD MEKA DMAQEV+ALFTNFDSSVYTIIFIP DADGVLPPGAEKYLKQAYGFYD + K+LDFYI LVPPET+  A+ +LPAK A LP FLFKE S +MK K
Sbjct:   97 AEAAAQSLEELEADIMICKEVFKPTLQYLKAEQFDAARTNTNYITRFFNLKKKIDSFIVQASDVVEDPDTMEKAFDMAQEVEALFTNFDSSVYTIIFIPADADGVLPPGAEKYLKQAYGFYDDINKVLDFYIDLVPPETKAAAEKLLPAKRAPLPSFLFKEKSTLMKEK 265          
BLAST of mRNA_C-tenellus_contig103.2.2 vs. uniprot
Match: A0A835YWX6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWX6_9STRA)

HSP 1 Score: 140 bits (352), Expect = 1.560e-38
Identity = 72/163 (44.17%), Postives = 106/163 (65.03%), Query Frame = 0
Query:   14 ASAAPPDLVELDA--QIMLFKEIFIPTLQYLKAQQFDAARTNTNYITRFLNLKKTIDTFIVTASDVVDDPDLMEKAVDMAQEVDALFTNFDSSVYTIIFIPGDADGVLPPGAEKYLKQAYGFYDSVLKLLDFYITLVPPETQDKAKAILPAKMAALPKFLFKE 174
            A AA P+    DA   +M+ K +  P+ +Y K  QFD+ARTN NYITR L ++K I   I+    + DD  L+E+A D+A   D+ F+N+DSS+YT+IFIP   DG LP G++KY  QA  +YD  + +LD +I+L P + +++A+A   A++  LP+FLFKE
Sbjct:   33 AQAAAPEQTFEDAVATLMVCKAVLEPSHKYFKLNQFDSARTNVNYITRQLGVRKAIGKVIIEGGAICDDEALVEEASDLAATADSTFSNYDSSIYTVIFIPPGEDGSLPKGSDKYFNQADVYYDQSVHMLDVFISLAPEDVRERARAKAEARVKELPRFLFKE 195          
BLAST of mRNA_C-tenellus_contig103.2.2 vs. uniprot
Match: A0A2V3IGD1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGD1_9FLOR)

HSP 1 Score: 62.4 bits (150), Expect = 2.970e-9
Identity = 39/124 (31.45%), Postives = 67/124 (54.03%), Query Frame = 0
Query:   37 PTLQYLKAQQFDAARTNTNYITRFLNLKKTIDTFI--VTASDVVDDPDLMEKAVDMAQEVDALFTNFDSSVYTIIFIPGDADGVLPPGAEKYLKQAYGFYDSVLKLLDFYITLVPPETQDKAKA 158
            P  +Y+    +D  RTN NY TR L L+K +      ++  D  D       A+D+  ++D   T  D+S+YT +FIP D DGV    A KY +QA  +Y + L  ++ +++ +P +  ++A++
Sbjct:    3 PVRRYIDEGAWDKGRTNVNYCTRMLALRKNMKKVAEQLSGDDYYD-------ALDITADLDNTMTQLDASLYTPLFIPAD-DGVSVEQA-KYQRQASEYYSNALDYIESFLSKLPTDVLERAQS 117          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig103.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JS60_9PHAE3.380e-8074.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL66_ECTSI5.160e-7876.92TPT domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YWX6_9STRA1.560e-3844.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3IGD1_9FLOR2.970e-931.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig103contigC-tenellus_contig103:5267..7408 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig103.2.2mRNA_C-tenellus_contig103.2.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig103 3708..7631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig103.2.2 ID=prot_C-tenellus_contig103.2.2|Name=mRNA_C-tenellus_contig103.2.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=184bp
MGLSLATVVDTDTASAAPPDLVELDAQIMLFKEIFIPTLQYLKAQQFDAA
RTNTNYITRFLNLKKTIDTFIVTASDVVDDPDLMEKAVDMAQEVDALFTN
FDSSVYTIIFIPGDADGVLPPGAEKYLKQAYGFYDSVLKLLDFYITLVPP
ETQDKAKAILPAKMAALPKFLFKENSVVMKAKM*
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