prot_C-tenellus_contig10276.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10276.1.1
Unique Nameprot_C-tenellus_contig10276.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length262
Homology
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: D7G8Q3_ECTSI (Mitochondrial ribosomal protein L46 isoform 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q3_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 3.240e-105
Identity = 150/262 (57.25%), Postives = 198/262 (75.57%), Query Frame = 0
Query:    1 WSIKDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDL-RKTSTQFLWVTKHEIGEYLGSDAGTYFSHMI 261
            ++IKD RP RPR AK  R++YL  R  AF  E +KA  LGLDW I+S+++LERLPVI+ E+TDWQ+D W+LQ +Q+ YG ++P E+G   +D   LTM+Q++EQS +P+APRRTPADE +DRT+L+RAL+ RL+LIVK  +   W LPESAW+ GETIRQ AERTA+QLL ++A   GQ D+VAQLHFVGNCPAGW WRT  +++  +   +G+KVF NRVQLI G+P + ++ + + LWVTKHEIGEYLG   G Y  H+I
Sbjct:   47 FTIKDRRPPRPRVAKQKRKQYLAERKDAFEAEQEKATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMGFKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVKPRSGDEWRLPESAWEPGETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQHEKFGDKVFINRVQLICGQPTVVKRQAAEHLWVTKHEIGEYLGESMGVYLKHLI 308          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A835YXA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 7.680e-47
Identity = 100/272 (36.76%), Postives = 146/272 (53.68%), Query Frame = 0
Query:    4 KDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFY-GREYPPELGIM--DNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAG----------ETIRQAAERTARQLLRRTAIVFGQPDNVAQLHF-VGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYLGSDAGTYFSHMI 261
            K  RPKRPR    +RE +L  RS    + ++  +  GLDW   ++++LERLPV++PE  DW+    +  ++  +  GR+YP EL I   D D P  +  +  E   IP+APR T AD   DRT+L+RAL+ R+ L+ +     PW    +A + G          ET+R AAER     LR        PD     ++ VGN PAG  WR  G++ER   G +GEKVF  R Q++ G+P   +   Q +WV K E+ EY G++ G Y+  ++
Sbjct:    6 KQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALR--------PDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI001B88B56C (39S ribosomal protein L46, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B56C)

HSP 1 Score: 102 bits (253), Expect = 3.470e-22
Identity = 81/236 (34.32%), Postives = 105/236 (44.49%), Query Frame = 0
Query:   40 GLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSF-YGREYPPELGIMDN-----------------DVPLLTMDQL-----MEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDL-RKTSTQFLWVTKHEIGEYL 249
            G  W + S++ LER PVI  E T+ ++ M +L  +    Y      EL   ++                 D   LT   L      E  N   A R T AD+ DDRTS+ R L+ +LILIVK+  G +S W  P+  WK GE++RQ AER  +             D      F GN P G     L K +  R    G K+FF R     G  DL  K  + FLWVTK E+ EYL
Sbjct:   34 GRQWQLASAVCLERHPVITSEKTELEQKMSKLMERMELEYSLLSDHELRHKEDLLLAQKRKQEDYEETEIDASRLTALDLEDKWEAELKNFTPASRNTDADKSDDRTSVQRKLDRKLILIVKQQLGDQSHWVFPQGLWKDGESMRQTAERVLQDC----------SDGKLDARFEGNAPCG-----LHKYKFKRESENGVKIFFFRASYAKGNIDLTNKRVSDFLWVTKDELTEYL 254          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A7S2F346_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F346_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.690e-22
Identity = 60/201 (29.85%), Postives = 105/201 (52.24%), Query Frame = 0
Query:   33 DKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFYG-REYPPELGI---MDNDVPLLTMDQLMEQSNIPV-----APRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLI 224
            +++A ++ L W++KS+ V+ER P+++P+  DW+++  E+QA   +Y  R+YPP +G+    + D   +  DQ  +     V     APR T ADE++D  S+ RAL   L L+VK+ +   W  P++  K  E + +AA+R   +       +F         HF    P G++     +  + + G YG K+FF   Q++
Sbjct:   61 ERRAADMNLGWLLKSTAVVERPPIVLPDMPDWKREFLEIQASLEYYKLRDYPPGIGVPHPSEPDEDDMVSDQNEDSDGEQVMKYEPAPRVTQADEDNDLRSMERALPESLYLVVKQKSTGTWAFPQTTVKEDEMLGKAAQRAIDETCSELPELF---------HFHRQ-PFGFIPIAFDEPTQQQLGAYGAKLFFYNAQVV 251          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI0006D92279 (39S ribosomal protein L46, mitochondrial n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D92279)

HSP 1 Score: 99.0 bits (245), Expect = 8.110e-22
Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 0
Query:  110 APRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 249
            A R T AD++DDRTSLNR L  RL+L+VKE  G E  W LP+  W++GET+RQ AER        TA      DN  +  F GN P G       KD R      G KV F + +L+ G     K   Q LWV+K E+ EYL
Sbjct:   41 AERITEADKKDDRTSLNRKLRERLVLLVKEKLGDEEVWLLPQVEWRSGETMRQTAERAL-----ATA-----SDNGVEAVFFGNVPCGVYKYKYPKDMRTDSSQ-GAKVVFFKARLLAGDLTKSKAKGQHLWVSKSELKEYL 171          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A2P6VD62_9CHLO (Serine threonine-kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VD62_9CHLO)

HSP 1 Score: 102 bits (254), Expect = 6.430e-21
Identity = 75/205 (36.59%), Postives = 106/205 (51.71%), Query Frame = 0
Query:   48 SIVLERLPVIMPEFTDWQKDMWELQ-AQQSFYGREYPPELGIMDNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTS--TQFLWVTKHEIGEYL 249
            ++V ERLPV++PE  +W+++ +E Q      Y +E P E      D+    M +    S  P APR T AD  +DR SL R L+ RL ++V++  +  W LP+     GET+RQ AER     +   A+         + +FVGN PAG     LG             +FF+R QLI G P LR  S  ++ +WVTK E+GEYL
Sbjct:   52 AVVFERLPVVVPEDPEWEREYFEWQDGLAGKYRKELPREF----TDLKDSEMKEDAGASYEP-APRVTAADHANDRRSLKRRLDQRLFMLVRQ--KGGWTLPQQENAEGETMRQTAERALADAVELEAV---------RPYFVGNAPAGHA--PLGD---------AGTLFFHRCQLIQGVPALRGGSGYSEHVWVTKEELGEYL 229          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI0018F78750 (39S ribosomal protein L46, mitochondrial isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F78750)

HSP 1 Score: 99.0 bits (245), Expect = 7.690e-21
Identity = 70/193 (36.27%), Postives = 97/193 (50.26%), Query Frame = 0
Query:   61 FTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQS--NIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 249
            F D +K  W    Q   Y  E   ++G   + V    ++ + EQ       A R   AD++DDR++LNR L+ +L L+VKE  G E  W LP+S WK GET+RQ AER    L  R         N  Q  F+GN PAG+      K  R    + G KVFF +  L+ G  + R+    ++WVTK E+ +YL
Sbjct:   98 FEDEEKIRWR---QAEDYDSEEEEDVG--QDIVTAQDLEDMWEQKLRQFRAADREQEADKKDDRSTLNRRLDEKLTLLVKEKVGDEDIWLLPQSEWKPGETMRQTAERALSALSGR---------NELQTAFLGNAPAGFYKYKYPKAMRTS-DNVGAKVFFFKAWLVNGDLEARRKG-DYVWVTKSELKDYL 274          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A401PD20_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PD20_SCYTO)

HSP 1 Score: 97.4 bits (241), Expect = 4.540e-20
Identity = 70/193 (36.27%), Postives = 95/193 (49.22%), Query Frame = 0
Query:   61 FTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQS--NIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 249
            F D +K  W    Q   Y  E   ++G   + V    ++ + EQ       A R   AD++DDR++LNR L+ +L L+VKE  G E  W LP+S WK GET+RQ AERT   L            N  Q  F+GN PAG+      K  R      G KVFF +  L+ G    R+    ++WVTK E+ +YL
Sbjct:  129 FEDEEKIRWR---QAEDYDSEEEEDVG--QDIVTAQDLEDMWEQKLRQFRAADREQEADKKDDRSTLNRRLDEKLTLLVKEKVGDEEIWLLPQSEWKPGETMRQTAERTLSAL----------SGNELQAAFLGNAPAGFYKYKYPKAMRTS-DTLGAKVFFFKALLVNGDLKARRKG-DYVWVTKSELKDYL 304          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A401S5P1_CHIPU (Uncharacterized protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401S5P1_CHIPU)

HSP 1 Score: 95.1 bits (235), Expect = 5.110e-20
Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 0
Query:  110 APRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLH--FVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 249
            A R   ADE++DR++LNR L+ +LIL+VKE  G E  W LP+S WK GET+RQ AER         + V G      +LH  F+GN PAG+      KD RN     G KVFF +  L+ G    R+    ++WVTK E+ +YL
Sbjct:   71 AERIQEADEKNDRSTLNRQLDKKLILLVKEKVGDEEIWLLPQSEWKPGETMRQTAERAL-------STVSGN-----ELHAVFLGNAPAGFYKYKYPKDLRNS-SIVGAKVFFFKALLMNGDLKTRRKG-DYVWVTKSELKDYL 200          
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A3R7GV70_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GV70_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 7.130e-20
Identity = 76/241 (31.54%), Postives = 113/241 (46.89%), Query Frame = 0
Query:   38 ELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQ----------AQQSFYGREYPPELGIMDNDVPLLTMDQLMEQ---SNIPVAPRRTPADEEDDRTSLNRALEHRLILIVK---EGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRK-TSTQFLWVTKHEIGEYLGSDAGTYFSHMI 261
            E G  W I S+ VLERLPV+ P+  DW+ D   +Q           ++ F+  E P    IM  + P        E+   +   +APR T  D  ++R SLNRAL+ R+ L+VK   + A+  W  P+   +  E +R AA       LR+     G    V+    VG  P G++      D        G KVFF + QL+ G  +L    ++ +LWVT+ E+ EYL S+   Y + M+
Sbjct:  345 EDGKKWRILSAAVLERLPVVQPDLKDWEMDFEVMQHEKALREDQRLEEDFWFME-PGTTHIMPEEAPWPNAKDDPEEIVGAGFHLAPRETEDDATNNRKSLNRALKGRMFLLVKNDQKDAKFQWFFPQGEKQEEEKMRDAA-------LRQVTETVGAEVEVSP---VGFAPIGYVKYLHDNDSE----FDGTKVFFYKSQLVYGDVELNAGKASDYLWVTRDELAEYLDSEIADYVTKMV 570          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8Q3_ECTSI3.240e-10557.25Mitochondrial ribosomal protein L46 isoform 2 n=2 ... [more]
A0A835YXA6_9STRA7.680e-4736.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001B88B56C3.470e-2234.3239S ribosomal protein L46, mitochondrial-like n=1 ... [more]
A0A7S2F346_9STRA7.690e-2229.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI0006D922798.110e-2243.6639S ribosomal protein L46, mitochondrial n=1 Tax=L... [more]
A0A2P6VD62_9CHLO6.430e-2136.59Serine threonine-kinase n=1 Tax=Micractinium condu... [more]
UPI0018F787507.690e-2136.2739S ribosomal protein L46, mitochondrial isoform X... [more]
A0A401PD20_SCYTO4.540e-2036.27Uncharacterized protein n=1 Tax=Scyliorhinus toraz... [more]
A0A401S5P1_CHIPU5.110e-2043.06Uncharacterized protein n=1 Tax=Chiloscyllium punc... [more]
A0A3R7GV70_9STRA7.130e-2031.54Nudix hydrolase domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 121..261
e-value: 1.8E-29
score: 104.2
NoneNo IPR availablePANTHERPTHR13124:SF1239S RIBOSOMAL PROTEIN L46, MITOCHONDRIALcoord: 19..261
IPR04000839S ribosomal protein L46, mitochondrialPANTHERPTHR1312439S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATEDcoord: 19..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10276contigC-tenellus_contig10276:724..3747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10276.1.1mRNA_C-tenellus_contig10276.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10276 724..3747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10276.1.1 ID=prot_C-tenellus_contig10276.1.1|Name=mRNA_C-tenellus_contig10276.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=262bp
WSIKDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIV
LERLPVIMPEFTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQ
LMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPES
AWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRT
LGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYLG
SDAGTYFSHMI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040008MRPL46