mRNA_C-tenellus_contig10276.1.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: D7G8Q3_ECTSI (Mitochondrial ribosomal protein L46 isoform 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Q3_ECTSI) HSP 1 Score: 316 bits (810), Expect = 3.240e-105 Identity = 150/262 (57.25%), Postives = 198/262 (75.57%), Query Frame = 1 Query: 1 WSIKDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDL-RKTSTQFLWVTKHEIGEYLGSDAGTYFSHMI 783 ++IKD RP RPR AK R++YL R AF E +KA LGLDW I+S+++LERLPVI+ E+TDWQ+D W+LQ +Q+ YG ++P E+G +D LTM+Q++EQS +P+APRRTPADE +DRT+L+RAL+ RL+LIVK + W LPESAW+ GETIRQ AERTA+QLL ++A GQ D+VAQLHFVGNCPAGW WRT +++ + +G+KVF NRVQLI G+P + ++ + + LWVTKHEIGEYLG G Y H+I Sbjct: 47 FTIKDRRPPRPRVAKQKRKQYLAERKDAFEAEQEKATSLGLDWGIRSALILERLPVIVEEYTDWQRDFWDLQTKQAHYGAKFPAEMGFKYDDEKSLTMEQVLEQSPVPLAPRRTPADESNDRTTLDRALDERLVLIVKPRSGDEWRLPESAWEPGETIRQTAERTAQQLLLKSATRKGQRDDVAQLHFVGNCPAGWFWRTADEEQGGQHEKFGDKVFINRVQLICGQPTVVKRQAAEHLWVTKHEIGEYLGESMGVYLKHLI 308
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A835YXA6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA6_9STRA) HSP 1 Score: 166 bits (420), Expect = 7.680e-47 Identity = 100/272 (36.76%), Postives = 146/272 (53.68%), Query Frame = 1 Query: 10 KDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFY-GREYPPELGIM--DNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAG----------ETIRQAAERTARQLLRRTAIVFGQPDNVAQLHF-VGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYLGSDAGTYFSHMI 783 K RPKRPR +RE +L RS + ++ + GLDW ++++LERLPV++PE DW+ + ++ + GR+YP EL I D D P + + E IP+APR T AD DRT+L+RAL+ R+ L+ + PW +A + G ET+R AAER LR PD ++ VGN PAG WR G++ER G +GEKVF R Q++ G+P + Q +WV K E+ EY G++ G Y+ ++ Sbjct: 6 KQGRPKRPRIRLTNRETWLGGRSFEMKKAEEAREASGLDWEYHAAVLLERLPVVVPEPEDWEVAWMDFMSEFRWNCGRQYPAELDIWREDRDAPAPSFREQHEACPIPLAPRVTEADASGDRTTLHRALDRRIFLLERASDAEPWRFVTAAVQRGGXXXXXXXXXETLRAAAERALAAALR--------PDVPGFKYWHVGNGPAGVDWRIFGEEERAARGAFGEKVFLMRAQIVVGEPAFARRGVQRVWVAKEELAEYFGAERGQYYVKLL 269
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI001B88B56C (39S ribosomal protein L46, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88B56C) HSP 1 Score: 102 bits (253), Expect = 3.470e-22 Identity = 81/236 (34.32%), Postives = 105/236 (44.49%), Query Frame = 1 Query: 118 GLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSF-YGREYPPELGIMDN-----------------DVPLLTMDQL-----MEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDL-RKTSTQFLWVTKHEIGEYL 747 G W + S++ LER PVI E T+ ++ M +L + Y EL ++ D LT L E N A R T AD+ DDRTS+ R L+ +LILIVK+ G +S W P+ WK GE++RQ AER + D F GN P G L K + R G K+FF R G DL K + FLWVTK E+ EYL Sbjct: 34 GRQWQLASAVCLERHPVITSEKTELEQKMSKLMERMELEYSLLSDHELRHKEDLLLAQKRKQEDYEETEIDASRLTALDLEDKWEAELKNFTPASRNTDADKSDDRTSVQRKLDRKLILIVKQQLGDQSHWVFPQGLWKDGESMRQTAERVLQDC----------SDGKLDARFEGNAPCG-----LHKYKFKRESENGVKIFFFRASYAKGNIDLTNKRVSDFLWVTKDELTEYL 254
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A7S2F346_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F346_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.690e-22 Identity = 60/201 (29.85%), Postives = 105/201 (52.24%), Query Frame = 1 Query: 97 DKKAKELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQAQQSFYG-REYPPELGI---MDNDVPLLTMDQLMEQSNIPV-----APRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLI 672 +++A ++ L W++KS+ V+ER P+++P+ DW+++ E+QA +Y R+YPP +G+ + D + DQ + V APR T ADE++D S+ RAL L L+VK+ + W P++ K E + +AA+R + +F HF P G++ + + + G YG K+FF Q++ Sbjct: 61 ERRAADMNLGWLLKSTAVVERPPIVLPDMPDWKREFLEIQASLEYYKLRDYPPGIGVPHPSEPDEDDMVSDQNEDSDGEQVMKYEPAPRVTQADEDNDLRSMERALPESLYLVVKQKSTGTWAFPQTTVKEDEMLGKAAQRAIDETCSELPELF---------HFHRQ-PFGFIPIAFDEPTQQQLGAYGAKLFFYNAQVV 251
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI0006D92279 (39S ribosomal protein L46, mitochondrial n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0006D92279) HSP 1 Score: 99.0 bits (245), Expect = 8.110e-22 Identity = 62/142 (43.66%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 328 APRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 747 A R T AD++DDRTSLNR L RL+L+VKE G E W LP+ W++GET+RQ AER TA DN + F GN P G KD R G KV F + +L+ G K Q LWV+K E+ EYL Sbjct: 41 AERITEADKKDDRTSLNRKLRERLVLLVKEKLGDEEVWLLPQVEWRSGETMRQTAERAL-----ATA-----SDNGVEAVFFGNVPCGVYKYKYPKDMRTDSSQ-GAKVVFFKARLLAGDLTKSKAKGQHLWVSKSELKEYL 171
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A2P6VD62_9CHLO (Serine threonine-kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VD62_9CHLO) HSP 1 Score: 102 bits (254), Expect = 6.430e-21 Identity = 75/205 (36.59%), Postives = 106/205 (51.71%), Query Frame = 1 Query: 142 SIVLERLPVIMPEFTDWQKDMWELQ-AQQSFYGREYPPELGIMDNDVPLLTMDQLMEQSNIPVAPRRTPADEEDDRTSLNRALEHRLILIVKEGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTS--TQFLWVTKHEIGEYL 747 ++V ERLPV++PE +W+++ +E Q Y +E P E D+ M + S P APR T AD +DR SL R L+ RL ++V++ + W LP+ GET+RQ AER + A+ + +FVGN PAG LG +FF+R QLI G P LR S ++ +WVTK E+GEYL Sbjct: 52 AVVFERLPVVVPEDPEWEREYFEWQDGLAGKYRKELPREF----TDLKDSEMKEDAGASYEP-APRVTAADHANDRRSLKRRLDQRLFMLVRQ--KGGWTLPQQENAEGETMRQTAERALADAVELEAV---------RPYFVGNAPAGHA--PLGD---------AGTLFFHRCQLIQGVPALRGGSGYSEHVWVTKEELGEYL 229
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: UPI0018F78750 (39S ribosomal protein L46, mitochondrial isoform X1 n=2 Tax=Scyliorhinus canicula TaxID=7830 RepID=UPI0018F78750) HSP 1 Score: 99.0 bits (245), Expect = 7.690e-21 Identity = 70/193 (36.27%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 181 FTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQS--NIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 747 F D +K W Q Y E ++G + V ++ + EQ A R AD++DDR++LNR L+ +L L+VKE G E W LP+S WK GET+RQ AER L R N Q F+GN PAG+ K R + G KVFF + L+ G + R+ ++WVTK E+ +YL Sbjct: 98 FEDEEKIRWR---QAEDYDSEEEEDVG--QDIVTAQDLEDMWEQKLRQFRAADREQEADKKDDRSTLNRRLDEKLTLLVKEKVGDEDIWLLPQSEWKPGETMRQTAERALSALSGR---------NELQTAFLGNAPAGFYKYKYPKAMRTS-DNVGAKVFFFKAWLVNGDLEARRKG-DYVWVTKSELKDYL 274
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A401PD20_SCYTO (Uncharacterized protein n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401PD20_SCYTO) HSP 1 Score: 97.4 bits (241), Expect = 4.540e-20 Identity = 70/193 (36.27%), Postives = 95/193 (49.22%), Query Frame = 1 Query: 181 FTDWQKDMWELQAQQSFYGREYPPELGIMDNDVPLLTMDQLMEQS--NIPVAPRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 747 F D +K W Q Y E ++G + V ++ + EQ A R AD++DDR++LNR L+ +L L+VKE G E W LP+S WK GET+RQ AERT L N Q F+GN PAG+ K R G KVFF + L+ G R+ ++WVTK E+ +YL Sbjct: 129 FEDEEKIRWR---QAEDYDSEEEEDVG--QDIVTAQDLEDMWEQKLRQFRAADREQEADKKDDRSTLNRRLDEKLTLLVKEKVGDEEIWLLPQSEWKPGETMRQTAERTLSAL----------SGNELQAAFLGNAPAGFYKYKYPKAMRTS-DTLGAKVFFFKALLVNGDLKARRKG-DYVWVTKSELKDYL 304
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A401S5P1_CHIPU (Uncharacterized protein n=1 Tax=Chiloscyllium punctatum TaxID=137246 RepID=A0A401S5P1_CHIPU) HSP 1 Score: 95.1 bits (235), Expect = 5.110e-20 Identity = 62/144 (43.06%), Postives = 82/144 (56.94%), Query Frame = 1 Query: 328 APRRTPADEEDDRTSLNRALEHRLILIVKE--GAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLH--FVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRKTSTQFLWVTKHEIGEYL 747 A R ADE++DR++LNR L+ +LIL+VKE G E W LP+S WK GET+RQ AER + V G +LH F+GN PAG+ KD RN G KVFF + L+ G R+ ++WVTK E+ +YL Sbjct: 71 AERIQEADEKNDRSTLNRQLDKKLILLVKEKVGDEEIWLLPQSEWKPGETMRQTAERAL-------STVSGN-----ELHAVFLGNAPAGFYKYKYPKDLRNS-SIVGAKVFFFKALLMNGDLKTRRKG-DYVWVTKSELKDYL 200
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Match: A0A3R7GV70_9STRA (Nudix hydrolase domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GV70_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 7.130e-20 Identity = 76/241 (31.54%), Postives = 113/241 (46.89%), Query Frame = 1 Query: 112 ELGLDWVIKSSIVLERLPVIMPEFTDWQKDMWELQ----------AQQSFYGREYPPELGIMDNDVPLLTMDQLMEQ---SNIPVAPRRTPADEEDDRTSLNRALEHRLILIVK---EGAESPWHLPESAWKAGETIRQAAERTARQLLRRTAIVFGQPDNVAQLHFVGNCPAGWLWRTLGKDERNRCGHYGEKVFFNRVQLITGKPDLRK-TSTQFLWVTKHEIGEYLGSDAGTYFSHMI 783 E G W I S+ VLERLPV+ P+ DW+ D +Q ++ F+ E P IM + P E+ + +APR T D ++R SLNRAL+ R+ L+VK + A+ W P+ + E +R AA LR+ G V+ VG P G++ D G KVFF + QL+ G +L ++ +LWVT+ E+ EYL S+ Y + M+ Sbjct: 345 EDGKKWRILSAAVLERLPVVQPDLKDWEMDFEVMQHEKALREDQRLEEDFWFME-PGTTHIMPEEAPWPNAKDDPEEIVGAGFHLAPRETEDDATNNRKSLNRALKGRMFLLVKNDQKDAKFQWFFPQGEKQEEEKMRDAA-------LRQVTETVGAEVEVSP---VGFAPIGYVKYLHDNDSE----FDGTKVFFYKSQLVYGDVELNAGKASDYLWVTRDELAEYLDSEIADYVTKMV 570 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10276.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10276.1.1 >prot_C-tenellus_contig10276.1.1 ID=prot_C-tenellus_contig10276.1.1|Name=mRNA_C-tenellus_contig10276.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=262bp WSIKDPRPKRPRTAKAHREEYLRRRSAAFLEEDKKAKELGLDWVIKSSIVback to top mRNA from alignment at C-tenellus_contig10276:724..3747+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10276.1.1 ID=mRNA_C-tenellus_contig10276.1.1|Name=mRNA_C-tenellus_contig10276.1.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3024bp|location=Sequence derived from alignment at C-tenellus_contig10276:724..3747+ (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10276:724..3747+ >mRNA_C-tenellus_contig10276.1.1 ID=mRNA_C-tenellus_contig10276.1.1|Name=mRNA_C-tenellus_contig10276.1.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=786bp|location=Sequence derived from alignment at C-tenellus_contig10276:724..3747+ (Choristocarpus tenellus KU2346)back to top |