prot_C-tenellus_contig10237.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10237.3.1
Unique Nameprot_C-tenellus_contig10237.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length82
Homology
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: A0A6H5KHI5_9PHAE (Val_tRNA-synt_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHI5_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 6.380e-31
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            QV++QLRG+VDFDVEI KLQKQLDTK+E Q+  L KKMEAPGY +KVP AVRE N KK AEF AQ+DS+LKA++QF  LKI
Sbjct:   31 QVYVQLRGMVDFDVEIKKLQKQLDTKIEPQITMLVKKMEAPGYEDKVPEAVRETNSKKKAEFEAQKDSVLKAMQQFEGLKI 111          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: D8LT18_ECTSI (Valine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT18_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 1.310e-27
Identity = 58/81 (71.60%), Postives = 68/81 (83.95%), Query Frame = 0
Query:    1 QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            QV++QLRG+VDFDVEI KLQKQLDTK+E Q+  L KKMEAPGY+ KVP AVRE N KK AEF AQ+DS+LKA++QF  LKI
Sbjct:  992 QVYVQLRGMVDFDVEIKKLQKQLDTKIEPQITMLVKKMEAPGYVNKVPEAVRETNSKKKAEFEAQKDSVLKAMQQFEGLKI 1072          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: A0A835ZF04_9STRA (Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF04_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.320e-17
Identity = 42/80 (52.50%), Postives = 60/80 (75.00%), Query Frame = 0
Query:    2 VHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            +++QL+GLVDFD EI KL+ QL+TKV+  +  L+KKM   GYM KVP ++R+ N KKL E  AQ D I+KAI+ F+++K+
Sbjct:  995 LYVQLKGLVDFDAEIAKLEGQLETKVKPAIEQLQKKMAMEGYMVKVPESIRDTNTKKLEELQAQADGIIKAIDNFKTMKL 1074          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: A0A6V1PAS2_HETAK (Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PAS2_HETAK)

HSP 1 Score: 70.1 bits (170), Expect = 3.430e-12
Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 0
Query:    1 QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSL 79
            QVHI LRGLV+F+ E+ KL+ QL  K+   + +L +KM A GY +KVP  V+  N++K+ E+ AQ ++I KAIE F+SL
Sbjct: 1011 QVHILLRGLVNFEEEVAKLEAQLADKLRPLMENLDRKMNAAGY-DKVPDKVKANNQQKMDEYKAQEENINKAIENFKSL 1088          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: L8HGI8_ACACA (Valine--tRNA ligase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HGI8_ACACA)

HSP 1 Score: 65.9 bits (159), Expect = 1.060e-10
Identity = 33/80 (41.25%), Postives = 61/80 (76.25%), Query Frame = 0
Query:    1 QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLK 80
            ++HI L+GL+D DVE+ KL+K+L     +Q+ +L+KKM+AP Y +KVP AV++ N +++ + + + ++I +AIE+F+++K
Sbjct:  944 EIHIFLKGLIDPDVEVKKLEKKLGEST-TQLETLEKKMKAPMYEDKVPAAVKQSNTERVGKLNQEIEAIKQAIEKFKAMK 1022          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: A0A6A7G606_9CRUS (Valine--tRNA ligase n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G606_9CRUS)

HSP 1 Score: 61.6 bits (148), Expect = 3.280e-9
Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    1 QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            +VHI L+GLVDF  ++ KL KQ  +K+E  + SLK K++ P Y+EKVP +V+E + +K      +   +L++I+Q  SL++
Sbjct:  954 EVHIVLKGLVDFQAQLKKLAKQ-HSKIEGSIKSLKAKLDNPKYLEKVPVSVQEADREKYESRKEESIKLLESIQQLESLQL 1033          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: N4TP51_FUSC1 (Valine--tRNA ligase n=58 Tax=Fusarium TaxID=5506 RepID=N4TP51_FUSC1)

HSP 1 Score: 61.2 bits (147), Expect = 4.490e-9
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 VHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            V + ++G VD D EI K QK+LD K +S +   +K +  PGY+EKV  AVRE +EK+LA+   + +S  + I+QF  LK+
Sbjct: 1013 VFLHVKGRVDLDAEIAKAQKKLD-KAKSSIQKQEKILNDPGYLEKVSDAVRETDEKRLADAKQELNSFEETIKQFEQLKL 1091          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: N1RHF0_FUSC4 (Valine--tRNA ligase n=1 Tax=Fusarium oxysporum f. sp. cubense (strain race 4) TaxID=2502994 RepID=N1RHF0_FUSC4)

HSP 1 Score: 61.2 bits (147), Expect = 4.530e-9
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0
Query:    2 VHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            V + ++G VD D EI K QK+LD K +S +   +K +  PGY+EKV  AVRE +EK+LA+   + +S  + I+QF  LK+
Sbjct: 1467 VFLHVKGRVDLDAEIAKAQKKLD-KAKSSIQKQEKILNDPGYLEKVSDAVRETDEKRLADAKQELNSFEETIKQFEQLKL 1545          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: A0A428TDU5_9HYPO (Valine--tRNA ligase n=1 Tax=Fusarium sp. AF-4 TaxID=1325735 RepID=A0A428TDU5_9HYPO)

HSP 1 Score: 58.9 bits (141), Expect = 2.850e-8
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    2 VHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            V + ++G VD D EITK QK+LD K  S +   +K +  PGY+EK   A+RE ++K+LA+   +  S  + I+QF  LK+
Sbjct:  500 VFLHVKGRVDIDAEITKAQKKLD-KARSSIQKQEKILNDPGYLEKASDAIRETDQKRLADAKQELTSFEETIKQFEQLKL 578          
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Match: C7YQE7_FUSV7 (Valine--tRNA ligase n=17 Tax=Fusarium TaxID=5506 RepID=C7YQE7_FUSV7)

HSP 1 Score: 57.0 bits (136), Expect = 1.400e-7
Identity = 32/80 (40.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    2 VHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPAVREGNEKKLAEFSAQRDSILKAIEQFRSLKI 81
            V + ++G VD D EI K QK+LD K  S +   +K +  PGY+EK   A+RE ++K+LA+   +  S  + I+QF  LK+
Sbjct: 1010 VFLHVKGRVDIDAEIVKAQKKLD-KARSSIQKQEKILNDPGYLEKASDAIRETDQKRLADAKQELTSFEETIKQFEQLKL 1088          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10237.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHI5_9PHAE6.380e-3171.60Val_tRNA-synt_C domain-containing protein n=1 Tax=... [more]
D8LT18_ECTSI1.310e-2771.60Valine--tRNA ligase n=1 Tax=Ectocarpus siliculosus... [more]
A0A835ZF04_9STRA1.320e-1752.50Valine--tRNA ligase n=1 Tax=Tribonema minus TaxID=... [more]
A0A6V1PAS2_HETAK3.430e-1249.37Valine--tRNA ligase n=1 Tax=Heterosigma akashiwo T... [more]
L8HGI8_ACACA1.060e-1041.25Valine--tRNA ligase n=1 Tax=Acanthamoeba castellan... [more]
A0A6A7G606_9CRUS3.280e-940.74Valine--tRNA ligase n=1 Tax=Hirondellea gigas TaxI... [more]
N4TP51_FUSC14.490e-943.75Valine--tRNA ligase n=58 Tax=Fusarium TaxID=5506 R... [more]
N1RHF0_FUSC44.530e-943.75Valine--tRNA ligase n=1 Tax=Fusarium oxysporum f. ... [more]
A0A428TDU5_9HYPO2.850e-841.25Valine--tRNA ligase n=1 Tax=Fusarium sp. AF-4 TaxI... [more]
C7YQE7_FUSV71.400e-740.00Valine--tRNA ligase n=17 Tax=Fusarium TaxID=5506 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019499Valyl-tRNA synthetase, tRNA-binding armPFAMPF10458Val_tRNA-synt_Ccoord: 11..75
e-value: 3.3E-13
score: 49.7
IPR037118Valyl-tRNA synthetase, tRNA-binding arm superfamilyGENE3D1.10.287.380coord: 4..76
e-value: 1.4E-16
score: 62.3
IPR010978Class I and II aminoacyl-tRNA synthetase, tRNA-binding armSUPERFAMILY46589tRNA-binding armcoord: 11..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10237contigC-tenellus_contig10237:1069..2897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10237.3.1mRNA_C-tenellus_contig10237.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10237 1069..2897 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10237.3.1 ID=prot_C-tenellus_contig10237.3.1|Name=mRNA_C-tenellus_contig10237.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=82bp
QVHIQLRGLVDFDVEITKLQKQLDTKVESQVISLKKKMEAPGYMEKVPPA
VREGNEKKLAEFSAQRDSILKAIEQFRSLKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019499Val-tRNA_synth_tRNA-bd
IPR037118Val-tRNA_synth_C_sf
IPR010978tRNA-bd_arm