prot_C-tenellus_contig10140.1.2 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10140.1.2
Unique Nameprot_C-tenellus_contig10140.1.2
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length372
Homology
BLAST of mRNA_C-tenellus_contig10140.1.2 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 9.430e-107
Identity = 167/383 (43.60%), Postives = 234/383 (61.10%), Query Frame = 0
Query:    1 ADKVLVAQLVDTVVPIDIVDGGNCYGGCTREVHAAAHVSGSSTTPGCTLLTTTPFTSNDPGDGTLEVTVYCKDGTGALLAQGRDVCQFEVCVDFAWRSVENALEVGLGQILYDVVITRSTQPRGAHSVHIQLVDEYGDGWAGGSNGRYNSWTLSRVLADGSDIISEGTLPEDHASQTIKECLEDGSYVFSTTANAEWSYDMGWTVCNHIGKAGESVSFTVSNGVCEVTDATPLIVVA---EAVDASESYCTLPAE--------LTCTSLSDGLNLEGVGLYHDGRCGETDLTGCNARTIDNCRFCFYDREAWIATFPGERMPDWEDCPCCVADNVGAVCATAGGGSGGNMETFINIAIGVSCAVAISVCIACSCGTQMVRSVR 372
            A++VLVA LVD +   DIV  G C  GC R   A AHV+G+     C L T +PF S+ P  G L   +YC+D +G L+ QG   C F+VCVDF+W S +      L          ++ +   A+   I + DEYGDGW GG +G YN+W L+ +  D   + S+GTL ++H S TIKECL DG Y+F+TTA + ++ DMGW +C++ G AGE + FTV NG C+   A  LI  A   E  DA +SYC LPA          TCT+LS G+ ++GVGL++D RC   D +GC AR+I  CR CF+D++ W++ FP  R+PDWE CPCCVAD +G  CA+ GGG G +    I +++G++  +AI+ C++C+ G  +VR +R
Sbjct:   22 AEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEFNGTCEVQTCEEPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTD--TVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESA-ELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASGGGG-GTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLR 400          
BLAST of mRNA_C-tenellus_contig10140.1.2 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 327 bits (839), Expect = 2.660e-104
Identity = 170/422 (40.28%), Postives = 241/422 (57.11%), Query Frame = 0
Query:    1 ADKVLVAQLVDTVVPIDIVDGGNCYGGCTREVHAAAHVSGSSTTPGCTLLTTTPFTSNDPGDGTLEVTVYCKDGTGALLAQGRDVCQFEVCVDFAWRSVENALEVGLGQILYDVVITRSTQPRGAHSVHIQL---------------------------------------VDEYGDGWAGGSNGRYNSWTLSRVLADGSDIISEGTLPEDHASQTIKECLEDGSYVFSTTANAEWSYDMGWTVCNHIGKAGESVSFTVSNGVCEVTDATPLIVVA---EAVDASESYCTLPAE--------LTCTSLSDGLNLEGVGLYHDGRCGETDLTGCNARTIDNCRFCFYDREAWIATFPGERMPDWEDCPCCVADNVGAVCATAGGGSGGNMETFINIAIGVSCAVAISVCIACSCGTQMVRSVR 372
            A+++LVA LVD +   DIV  G C  GC R   A AHV+G+     C L T +PF S+ P  G L   +YC+D +G L+ QG   C F+VCVDF+W S +        ++ Y+V + R ++P   H++++ L                                        DEYGDGW GG +G YN+W L+ +  D   + S+GTL ++H S TIKECL DG Y+F+TTA + ++ DMGW +C++ G AGE + FTV NG C+   A  LI  A   E  DA +SYC LPA          TCT+LS G+ ++GVGL++D RC   D +GC AR+I  CR CF+D++ W++ FP  R+PDWE CPCCVAD +G  CA+ GGG G +    I I++G++  +AI+ C++C+ G  +VR  R
Sbjct:  130 AEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXX---ELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTD--TVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESA-ELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGGG-GTDDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFR 544          
BLAST of mRNA_C-tenellus_contig10140.1.2 vs. uniprot
Match: A0A6H5KLX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX8_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 7.740e-54
Identity = 133/371 (35.85%), Postives = 169/371 (45.55%), Query Frame = 0
Query:   11 DTVVPIDIVDGGNCYGGCTR-----EVHAAAHVSGSSTTPGCTLLTTT--PFTSNDPGDGTLEVTVYCKDGTGALLAQGRDVCQFEVCVDFAWRS--------VENALEVGLGQILYDVVITR-----------------------------STQPRGAHSVHIQLVDEYGDGWAGGSNGRYNSWTLSRVLADGSDIISEGTLPEDHASQTIKECLEDGSYVFSTTANAEWSYDMGWTVCNHIGKAGESVSFTVSNGVCEVTDAT----PLIVVAEAVDASESYCTLPAELTCTSLSDGL-NLEG--VGLYHDGRC--GETDLTGCNARTIDNCRFCFYDREAWIATFPGERMPDWEDCPCCVADNVGAVC 328
            D +V  DI  GG C  GC R     EV+AA  V        C L        T  D   G+L V   C +  G LL Q +  C + VCV   W+         VE+A       +L +V +                               S  P G   + I   DEYGDGW GG   R N+WTL+   A  S +++EGTL + H S   K CL+DG Y F TTA+A WS +  W VC   G  G S+ F +SN  C V D++    P   VAE   +   +C LPA+  C  L  G+  + G  VG+Y+D  C  G    TGC    +  CR CF +RE W+A FP ER PDW DCPCCVAD +   C
Sbjct:   61 DAIVAADIEPGGPCDAGCVRTVVNAEVYAAGEVD-------CELRVENLLDHTDEDVLGGSLNVVHSCTNAAGDLLYQDQGECLYSVCVTAEWKGELLTYTVVVEHAEPSAAHTVLIEVYMNEYEDLLDRPDVTVVSDSSVLCELGTSCADSSACPSGYSELVITTTDEYGDGWVGGLPDRSNTWTLTD--ASSSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTADAAWSSESAWNVCEVDGGMGGSLDFEMSNSACNVLDSSSKDGPPATVAET--SLGDFCALPADDPCVDLDVGVAEVRGPSVGMYYDESCLEGGGGDTGCGGGGVTVCRICFVNREFWLADFPDERYPDWLDCPCCVADALVVTC 420          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10140.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDR3_ECTSI9.430e-10743.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE2.660e-10440.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX8_9PHAE7.740e-5435.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..341
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 364..372
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 342..363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10140contigC-tenellus_contig10140:450..2129 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10140.1.2mRNA_C-tenellus_contig10140.1.2Choristocarpus tenellus KU2346mRNAC-tenellus_contig10140 450..2129 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10140.1.2 ID=prot_C-tenellus_contig10140.1.2|Name=mRNA_C-tenellus_contig10140.1.2|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=372bp
ADKVLVAQLVDTVVPIDIVDGGNCYGGCTREVHAAAHVSGSSTTPGCTLL
TTTPFTSNDPGDGTLEVTVYCKDGTGALLAQGRDVCQFEVCVDFAWRSVE
NALEVGLGQILYDVVITRSTQPRGAHSVHIQLVDEYGDGWAGGSNGRYNS
WTLSRVLADGSDIISEGTLPEDHASQTIKECLEDGSYVFSTTANAEWSYD
MGWTVCNHIGKAGESVSFTVSNGVCEVTDATPLIVVAEAVDASESYCTLP
AELTCTSLSDGLNLEGVGLYHDGRCGETDLTGCNARTIDNCRFCFYDREA
WIATFPGERMPDWEDCPCCVADNVGAVCATAGGGSGGNMETFINIAIGVS
CAVAISVCIACSCGTQMVRSVR
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