prot_C-tenellus_contig10135.2.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-tenellus_contig10135.2.1
Unique Name	prot_C-tenellus_contig10135.2.1
Type	polypeptide
Organism	Choristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length	135

Homology

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A6H5KV80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV80_9PHAE)

HSP 1 Score: 180 bits (457), Expect = 5.110e-50
Identity = 89/103 (86.41%), Postives = 96/103 (93.20%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLFA 124
            VL F+ +V+KTAQLEKDCVIMSLVYIERVLTETAG+LRI  +NWRS+VL GLILASKIWDDLSMWNCDFS+VGR  LRRINELEVAVLQVLQYNVRVASSLFA
Sbjct:  279 VLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFGKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFA 381

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A836C9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q1_9STRA)

HSP 1 Score: 159 bits (403), Expect = 9.890e-43
Identity = 76/101 (75.25%), Postives = 88/101 (87.13%), Query Frame = 0

Query:   25 FFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            FF ++Y+TAQLE DCV+ SL YIER+L ETAG LR+CR NWRSI L+G+ILASK+WDDLSMW+ DF+RVGRL L+RINELEVAVLQ LQYNVRV SS FAR
Sbjct:  270 FFSYIYRTAQLECDCVVTSLFYIERLLMETAGELRMCRTNWRSITLSGMILASKVWDDLSMWSVDFARVGRLTLKRINELEVAVLQALQYNVRVDSSNFAR 370

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S1UIR8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIR8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 5.450e-29
Identity = 54/99 (54.55%), Postives = 74/99 (74.75%), Query Frame = 0

Query:   25 FFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLF 123
            F+ +V+ TAQLE+ C+I S +YIER L  T+GRL +   NWRS++LAGL LASKIWDD SMWN DFS VG + L +IN LE+A+L  +Q++V +  +L+
Sbjct:  157 FYKYVFDTAQLEEMCIITSTIYIERALHMTSGRLLLTSSNWRSVLLAGLALASKIWDDFSMWNADFSDVGNITLTKINSLELAILSAIQWDVHIPRNLY 255

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A485KJY8_9STRA (Aste57867_8288 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJY8_9STRA)

HSP 1 Score: 119 bits (297), Expect = 6.410e-29
Identity = 55/107 (51.40%), Postives = 81/107 (75.70%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            +L+F   VY+TAQ+E +C+IMSL+Y+ER+L  TAGR L++   NW +IV   +++ASK+WDDLSM N DFS++  G  PLRRIN LE+  L  ++YNVRV+++ +A+
Sbjct:  257 ILQFMTQVYRTAQMESECIIMSLIYVERLLQATAGRGLQLRGSNWPAIVFCSMVMASKVWDDLSMCNADFSKIFHGMFPLRRINALELLYLDAVEYNVRVSAASYAK 363

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A6G0XV53_9STRA (WW domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV53_9STRA)

HSP 1 Score: 118 bits (296), Expect = 8.400e-29
Identity = 52/108 (48.15%), Postives = 82/108 (75.93%), Query Frame = 0

Query:   21 GVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            G+++F   +Y+TAQ+E +C+IM L+Y+ER+L  TAG+ L++   NW +IV   +++ASK+WDDLSM N DFS++  G+ PLRRIN LE+  L  ++YNVRV+++ +A+
Sbjct:  250 GIVQFMTQIYRTAQMESECIIMGLIYVERLLQATAGKGLQLRTSNWEAIVFCSMVMASKVWDDLSMCNADFSKIFQGQFPLRRINALELLYLSAVEYNVRVSAASYAK 357

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7R9ZM94_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM94_9STRA)

HSP 1 Score: 113 bits (283), Expect = 1.390e-28
Identity = 51/106 (48.11%), Postives = 78/106 (73.58%), Query Frame = 0

Query:   24 RFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVG----RLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            +F+  ++  AQ+E DC+IMSL+Y+ER++  T G LR    NWRS++ + ++L+SK+WDDLSMWN DFS+        PL+RINELE+A+L VL++ V+V +S +A+
Sbjct:   43 KFYRDIFVKAQMESDCIIMSLIYVERLIKTTRGTLRPRASNWRSMLFSCMVLSSKVWDDLSMWNADFSQSCPPGVSFPLQRINELELAILNVLEFQVKVPASEYAK 148

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S2S551_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S551_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.260e-28
Identity = 51/108 (47.22%), Postives = 80/108 (74.07%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVG----RLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            +  F+  V+  +Q+E DC+I+SL+YIER++ +T G +R   RNWRS++ + ++L+SK+WDDLSMWNCDFS++G       L+R N+LEVA+L  L+Y V+V +S +A+
Sbjct:  113 ITAFYRDVFLRSQMEVDCIIISLIYIERLIKKTDGEVRPNVRNWRSVLFSCMVLSSKVWDDLSMWNCDFSKIGPSGVTFSLQRTNQLEVALLSHLEYKVKVNASEYAK 220

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S2LBG9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LBG9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.260e-28
Identity = 51/108 (47.22%), Postives = 79/108 (73.15%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVG----RLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            V  F+  ++  +Q+E +C+I+SL+Y+ER++ ++ G LR    NWRSI+ + ++LASK+WDDLSMWNCDFS++G       L+R NELE+A+L  LQY V+V +S +A+
Sbjct:  157 VTDFYRSIFVRSQMEIECIIISLIYVERLIKKSKGELRPQSDNWRSILFSCMVLASKVWDDLSMWNCDFSKIGPCGMTFSLQRTNELEIALLSALQYRVKVGASEYAK 264

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S3DPP7_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPP7_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.010e-28
Identity = 54/108 (50.00%), Postives = 76/108 (70.37%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVG----RLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            +  F+  V+  AQ+E DCVIMSL+Y+ER++  T G LR    NWRS++ + ++LASK+WDDLSMWN DFS+         L+RINELE+AVL  L+Y V+V +S +A+
Sbjct:   67 ITTFYRDVFGRAQMESDCVIMSLIYVERLIKNTRGNLRPRATNWRSVLFSCMVLASKVWDDLSMWNGDFSQTCPAGVTFTLQRINELELAVLDALEYIVKVPASEYAK 174

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BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S2SV86_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV86_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.840e-27
Identity = 53/105 (50.48%), Postives = 80/105 (76.19%), Query Frame = 0

Query:   22 VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV-GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 125
            ++ FF  +Y  +Q+E +C+IMSL+Y+ERV   T G +++   NW+S++++ +I+ASK+WDDLSMWN DFS+V     LRRINELE+A+L VL Y V+VA+S +A+
Sbjct:  258 LVTFFREIYVKSQMEIECIIMSLIYLERVTKVTKGSIQVRPNNWKSLLVSTMIMASKVWDDLSMWNADFSQVCPSFTLRRINELELALLDVLGYIVKVAASDYAK 362

The following BLAST results are available for this feature:

BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot

BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KV80_9PHAE	5.110e-50	86.41	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836C9Q1_9STRA	9.890e-43	75.25	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1UIR8_9STRA	5.450e-29	54.55	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A485KJY8_9STRA	6.410e-29	51.40	Aste57867_8288 protein n=1 Tax=Aphanomyces stellat...	[more]
A0A6G0XV53_9STRA	8.400e-29	48.15	WW domain-containing protein n=1 Tax=Aphanomyces e...	[more]
A0A7R9ZM94_9STRA	1.390e-28	48.11	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
A0A7S2S551_9STRA	3.260e-28	47.22	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A7S2LBG9_9STRA	3.260e-28	47.22	Hypothetical protein n=1 Tax=Skeletonema marinoi T...	[more]
A0A7S3DPP7_9STRA	6.010e-28	50.00	Hypothetical protein n=1 Tax=Amphiprora paludosa T...	[more]
A0A7S2SV86_9STRA	2.840e-27	50.48	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.472.10		coord: 20..129 e-value: 5.8E-25 score: 90.0
None	No IPR available	PANTHER	PTHR14248	CYCLIN Y, ISOFORM A	coord: 24..125
IPR013922	Cyclin PHO80-like	PFAM	PF08613	Cyclin	coord: 27..115 e-value: 8.6E-12 score: 45.7
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 23..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-tenellus_contig10135	contig	C-tenellus_contig10135:1942..5358 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Choristocarpus tenellus KU2346 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-tenellus_contig10135.2.1	mRNA_C-tenellus_contig10135.2.1	Choristocarpus tenellus KU2346	mRNA	C-tenellus_contig10135 1647..5454 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-tenellus_contig10135.2.1 ID=prot_C-tenellus_contig10135.2.1|Name=mRNA_C-tenellus_contig10135.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp
MDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERV
LTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRR
INELEVAVLQVLQYNVRVASSLFARQEEGPFLVR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013922	Cyclin_PHO80-like
IPR036915	Cyclin-like_sf