mRNA_C-tenellus_contig10135.2.1 (mRNA) Choristocarpus tenellus KU2346
Overview
Homology
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A6H5KV80_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV80_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.610e-61 Identity = 118/189 (62.43%), Postives = 132/189 (69.84%), Query Frame = 1 Query: 1 VTCLVLHHHICEGCAVNWYIDRRFSIFNDLPEMDIPVGE----------------------GQYTGWPGVGGGKG-----------VLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLFA 468 VT LVLHHHI EGCA++W ID RF+IFND P M++ G+ GW G +G VL F+ +V+KTAQLEKDCVIMSLVYIERVLTETAG+LRI +NWRS+VL GLILASKIWDDLSMWNCDFS+VGR LRRINELEVAVLQVLQYNVRVASSLFA Sbjct: 197 VTSLVLHHHISEGCAMSWPIDPRFNIFNDPPGMEVASSSNGSSNGSXXXXXXXXXXXXXXXGREGGW----GSRGPPERPPPSYAEVLEFYSYVFKTAQLEKDCVIMSLVYIERVLTETAGKLRIFGKNWRSVVLCGLILASKIWDDLSMWNCDFSKVGRCSLRRINELEVAVLQVLQYNVRVASSLFA 381
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A836C9Q1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9Q1_9STRA) HSP 1 Score: 185 bits (469), Expect = 1.430e-49 Identity = 93/157 (59.24%), Postives = 116/157 (73.89%), Query Frame = 1 Query: 1 VTCLVLHHHICEGCAVNWYIDRRFSIFNDLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 V L+LHHHI +G A++W I ++F+IF+D G+ + + V FF ++Y+TAQLE DCV+ SL YIER+L ETAG LR+CR NWRSI L+G+ILASK+WDDLSMW+ DF+RVGRL L+RINELEVAVLQ LQYNVRV SS FAR Sbjct: 220 VIALILHHHILQGSALDWPIAKQFAIFDDSVMSFRACRNGEMPTF------EQVHDFFSYIYRTAQLECDCVVTSLFYIERLLMETAGELRMCRTNWRSITLSGMILASKVWDDLSMWSVDFARVGRLTLKRINELEVAVLQALQYNVRVDSSNFAR 370
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A6G0XV53_9STRA (WW domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV53_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.700e-30 Identity = 67/156 (42.95%), Postives = 101/156 (64.74%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFNDLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A +D+RF+ F P+ V P V G+++F +Y+TAQ+E +C+IM L+Y+ER+L TAG+ L++ NW +IV +++ASK+WDDLSM N DFS++ G+ PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 213 VLHGHIVEAQANPLPLDQRFAGFQS-PQAYSSV-------MPTV---DGIVQFMTQIYRTAQMESECIIMGLIYVERLLQATAGKGLQLRTSNWEAIVFCSMVMASKVWDDLSMCNADFSKIFQGQFPLRRINALELLYLSAVEYNVRVSAASYAK 357
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A485KJY8_9STRA (Aste57867_8288 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KJY8_9STRA) HSP 1 Score: 126 bits (317), Expect = 6.110e-30 Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFNDLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A +D RF F P P V +L+F VY+TAQ+E +C+IMSL+Y+ER+L TAGR L++ NW +IV +++ASK+WDDLSM N DFS++ G PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 217 VLHDHILEAQAHPMPLDARFQGFQ------TPSSSAAALPPPSV---DAILQFMTQVYRTAQMESECIIMSLIYVERLLQATAGRGLQLRGSNWPAIVFCSMVMASKVWDDLSMCNADFSKIFHGMFPLRRINALELLYLDAVEYNVRVSAASYAK 363
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7R9ZM94_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZM94_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.840e-28 Identity = 57/142 (40.14%), Postives = 91/142 (64.08%), Query Frame = 1 Query: 58 IDRRFSIFNDLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVG----RLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 + + +IFNDL + + + + V +F+ ++ AQ+E DC+IMSL+Y+ER++ T G LR NWRS++ + ++L+SK+WDDLSMWN DFS+ PL+RINELE+A+L VL++ V+V +S +A+ Sbjct: 7 LKEKHTIFNDLESQQQQIDDDGSMPQYSIPSLEEVGKFYRDIFVKAQMESDCIIMSLIYVERLIKTTRGTLRPRASNWRSMLFSCMVLSSKVWDDLSMWNADFSQSCPPGVSFPLQRINELELAILNVLEFQVKVPASEYAK 148
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A7S1UIR8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIR8_9STRA) HSP 1 Score: 124 bits (310), Expect = 2.460e-28 Identity = 67/159 (42.14%), Postives = 93/159 (58.49%), Query Frame = 1 Query: 10 LVLHHHICEGCAVNWYIDRRFSIFND---LPEMD-IPVG---EGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGRLRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRVGRLPLRRINELEVAVLQVLQYNVRVASSLF 465 + LH + +W F+ F+D PE +PV E YT F+ +V+ TAQLE+ C+I S +YIER L T+GRL + NWRS++LAGL LASKIWDD SMWN DFS VG + L +IN LE+A+L +Q++V + +L+ Sbjct: 110 IALHSRMKTASERDWRQSADFTFFDDNDISPESKGVPVAPSPELMYT-------------FYKYVFDTAQLEEMCIITSTIYIERALHMTSGRLLLTSSNWRSVLLAGLALASKIWDDFSMWNADFSDVGNITLTKINSLELAILSAIQWDVHIPRNLY 255
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: W4H577_9STRA (WW domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H577_9STRA) HSP 1 Score: 122 bits (306), Expect = 3.130e-28 Identity = 64/164 (39.02%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFN--------DLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A +D RF F D+P +D ++ F +Y+TAQ+E +C+IM L+Y+ER+L G+ L++ NW+SIV +++ASK+WDDLSM N DFS++ G PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 258 VLHGHILESTAAPLPMDPRFLGFQAPSSSMSFDVPSVDA------------------IVAFMTQIYRTAQMESECIIMGLIYVERLLQAATGKGLQLTPTNWQSIVFCSMVMASKVWDDLSMCNADFSKIFHGNFPLRRINALELLYLDCVEYNVRVSAASYAK 403
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A397DF99_9STRA (WW domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DF99_9STRA) HSP 1 Score: 122 bits (306), Expect = 5.230e-28 Identity = 64/164 (39.02%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFN--------DLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A +D RF F D+P +D ++ F +Y+TAQ+E +C+IM L+Y+ER+L G+ L++ NW+SIV +++ASK+WDDLSM N DFS++ G PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 342 VLHGHILESTAAPLPMDPRFLGFQAPSSSMSFDVPSVDA------------------IVAFMTQIYRTAQMESECIIMGLIYVERLLQAATGKGLQLTPTNWQSIVFCSMVMASKVWDDLSMCNADFSKIFHGNFPLRRINALELLYLDCVEYNVRVSAASYAK 487
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A418F9A4_9STRA (WW domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418F9A4_9STRA) HSP 1 Score: 122 bits (306), Expect = 8.590e-28 Identity = 64/164 (39.02%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFN--------DLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A +D RF F D+P +D ++ F +Y+TAQ+E +C+IM L+Y+ER+L G+ L++ NW+SIV +++ASK+WDDLSM N DFS++ G PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 1020 VLHGHILESTAAPLPMDPRFLGFQAPSSSMSFDVPSVDA------------------IVAFMTQIYRTAQMESECIIMGLIYVERLLQAATGKGLQLTPTNWQSIVFCSMVMASKVWDDLSMCNADFSKIFHGNFPLRRINALELLYLDCVEYNVRVSAASYAK 1165
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Match: A0A6A5ACV4_9STRA (WW domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ACV4_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.790e-27 Identity = 60/156 (38.46%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 13 VLHHHICEGCAVNWYIDRRFSIFNDLPEMDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVLTETAGR-LRICRRNWRSIVLAGLILASKIWDDLSMWNCDFSRV--GRLPLRRINELEVAVLQVLQYNVRVASSLFAR 471 VLH HI E A D+P +D ++ F +Y+TAQ+E +C+IM L+Y+ER+L G+ L++ NW+SIV +++ASK+WDDLSM N DFS++ G PLRRIN LE+ L ++YNVRV+++ +A+ Sbjct: 258 VLHGHILESTAXXXXXXXXXXXSFDVPSVDA------------------IVAFMTQIYRTAQMESECIIMGLIYVERLLQAATGKGLQLTPTNWQSIVFCSMVMASKVWDDLSMCNADFSKIFHGNFPLRRINALELLYLDCVEYNVRVSAASYAK 395 The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10135.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-tenellus_contig10135.2.1 >prot_C-tenellus_contig10135.2.1 ID=prot_C-tenellus_contig10135.2.1|Name=mRNA_C-tenellus_contig10135.2.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=135bp MDIPVGEGQYTGWPGVGGGKGVLRFFMHVYKTAQLEKDCVIMSLVYIERVback to top mRNA from alignment at C-tenellus_contig10135:1647..5454- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-tenellus_contig10135.2.1 ID=mRNA_C-tenellus_contig10135.2.1|Name=mRNA_C-tenellus_contig10135.2.1|organism=Choristocarpus tenellus KU2346|type=mRNA|length=3808bp|location=Sequence derived from alignment at C-tenellus_contig10135:1647..5454- (Choristocarpus tenellus KU2346)back to top Coding sequence (CDS) from alignment at C-tenellus_contig10135:1647..5454- >mRNA_C-tenellus_contig10135.2.1 ID=mRNA_C-tenellus_contig10135.2.1|Name=mRNA_C-tenellus_contig10135.2.1|organism=Choristocarpus tenellus KU2346|type=CDS|length=405bp|location=Sequence derived from alignment at C-tenellus_contig10135:1647..5454- (Choristocarpus tenellus KU2346)back to top |