prot_C-tenellus_contig10132.3.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10132.3.1
Unique Nameprot_C-tenellus_contig10132.3.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length108
Homology
BLAST of mRNA_C-tenellus_contig10132.3.1 vs. uniprot
Match: D8LS95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS95_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 5.560e-29
Identity = 59/104 (56.73%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    3 SGKGILGTLGAAVGLTAANILTLSRGTFEV-APSPLQLVSAAILIGSWAALVEVCVPSPQKTLPYDSFPLALDDNAVLPVLSALGAAGIFHMLGLGECQLGSWV 105
            +GKG+LG LG A  LT AN   L++  FE  AP+  ++V A  +I +WAA VEV VPSPQKTLP + FPLA DDNA LPVL A+GAA +F +LGLG C+L  W+
Sbjct:  198 TGKGLLGALGCATALTLANSFVLAKARFESGAPTLRRIVLAGGMIAAWAAAVEVSVPSPQKTLPCEGFPLAFDDNAALPVLGAMGAAVVFRVLGLGSCELRPWL 301          
BLAST of mRNA_C-tenellus_contig10132.3.1 vs. uniprot
Match: A0A7S0U658_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0U658_HEMAN)

HSP 1 Score: 67.0 bits (162), Expect = 9.890e-11
Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
Query:    4 GKGILGTLGAAVGLTAANILTLSR-GTFEVAPSPLQLVSAAILIGSWAALVEVCVPSPQKTLPYDSFPLALDDNAVLPVLSALGAAGIFHMLG 95
            GK + GTLG  +  +A +   L+  G    AP  L L+ A  L+G   A+VE+ VPSP   LP+ SFPL LDDN +LPV+S+LGA   + +LG
Sbjct:  300 GKSLAGTLGFFLCTSALSYFVLAAAGATLTAPLALALILAPALMG---AIVELVVPSPNLVLPFKSFPLGLDDNFMLPVMSSLGAHIAWKLLG 389          
BLAST of mRNA_C-tenellus_contig10132.3.1 vs. uniprot
Match: A0A7S0W7F8_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W7F8_9CRYP)

HSP 1 Score: 61.2 bits (147), Expect = 4.670e-9
Identity = 40/93 (43.01%), Postives = 51/93 (54.84%), Query Frame = 0
Query:    4 GKGILGTLGAAVGLTAANILTLSR-GTFEVAPSPLQLVSAAILIGSWAALVEVCVPSPQKTLPYDSFPLALDDNAVLPVLSALGAAGIFHMLG 95
            GK + GTLG        + L L+  G     P    L+ A  ++G   A+VE+ VPSP   LP+  FPL LDDN +LPVLSALGA   +  LG
Sbjct:  118 GKSLAGTLGFLACTALLSYLVLAAAGAVLTGPLVASLIVAPAIMG---AVVELVVPSPNLVLPFKKFPLGLDDNFMLPVLSALGAHIAWKALG 207          
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10132.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LS95_ECTSI5.560e-2956.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0U658_HEMAN9.890e-1145.16Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0W7F8_9CRYP4.670e-943.01Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..57
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 77..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10132contigC-tenellus_contig10132:5260..5583 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10132.3.1mRNA_C-tenellus_contig10132.3.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10132 5260..5592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10132.3.1 ID=prot_C-tenellus_contig10132.3.1|Name=mRNA_C-tenellus_contig10132.3.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=108bp
MPSGKGILGTLGAAVGLTAANILTLSRGTFEVAPSPLQLVSAAILIGSWA
ALVEVCVPSPQKTLPYDSFPLALDDNAVLPVLSALGAAGIFHMLGLGECQ
LGSWVLW*
back to top