prot_C-tenellus_contig10108.1.1 (polypeptide) Choristocarpus tenellus KU2346

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-tenellus_contig10108.1.1
Unique Nameprot_C-tenellus_contig10108.1.1
Typepolypeptide
OrganismChoristocarpus tenellus KU2346 (Choristocarpus tenellus KU2346)
Sequence length162
Homology
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BLAST of mRNA_C-tenellus_contig10108.1.1 vs. uniprot
Match: D8LTP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP0_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 1.920e-6
Identity = 33/63 (52.38%), Postives = 34/63 (53.97%), Query Frame = 0 
Query:  114 LRKGYLLMXXXXXXXXXXV--------------EWLERFFYLSGHFLRYKKHSLNLTSVNLKQ 162
            +RKGYLLM                         EW ERFFYL GHFLRYKK S NLTSVNLKQ
Sbjct:  141 IRKGYLLMLTKPGQTWSGTAGGGGGVGVEAGSGEWSERFFYLLGHFLRYKKQSRNLTSVNLKQ 203
The following BLAST results are available for this feature:
BLAST of mRNA_C-tenellus_contig10108.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTP0_ECTSI1.920e-652.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..79
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 112..162
score: 7.195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-tenellus_contig10108contigC-tenellus_contig10108:3643..4934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Choristocarpus tenellus KU2346 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-tenellus_contig10108.1.1mRNA_C-tenellus_contig10108.1.1Choristocarpus tenellus KU2346mRNAC-tenellus_contig10108 3350..4934 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-tenellus_contig10108.1.1 ID=prot_C-tenellus_contig10108.1.1|Name=mRNA_C-tenellus_contig10108.1.1|organism=Choristocarpus tenellus KU2346|type=polypeptide|length=162bp
MSGLGSEQSSPRLPLSRKLVAAGKAAIRGRTDGARATVGALRSHVSPQVN
NEDPLLSSRRRTLTHSNSSNGRIGDTWGAGSSVQRRSGSHTPGMMAGEGM
GTLVLANGKGISRLRKGYLLMMREGGGGGGGVEWLERFFYLSGHFLRYKK
HSLNLTSVNLKQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain